RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 POLMQ9NP87 494 aaPredicted RBP10.15□□□□□ -0.78
SMG1-214ENST00000568038 SNRKQ9NRH2 765 aa10.15□□□□□ -0.78
SMG1-214ENST00000568038 PARP4Q9UKK3 1724 aaKnown RBP10.14□□□□□ -0.79
SMG1-214ENST00000568038 CYP27B1O15528 508 aa10.14□□□□□ -0.79
SMG1-214ENST00000568038 GIGYF1O75420 1035 aaPredicted RBP10.14□□□□□ -0.79
SMG1-214ENST00000568038 CTSOP43234 321 aaPredicted RBP10.14□□□□□ -0.79
SMG1-214ENST00000568038 BANK1Q8NDB2 785 aa10.14□□□□□ -0.79
SMG1-214ENST00000568038 CYLDQ9NQC7 956 aa10.14□□□□□ -0.79
SMG1-214ENST00000568038 PCDH11XQ9BZA7 1347 aa10.13□□□□□ -0.79
SMG1-214ENST00000568038 PCDH11YQ9BZA8 1340 aa10.13□□□□□ -0.79
SMG1-214ENST00000568038 GNAT3A8MTJ3 354 aa10.13□□□□□ -0.79
SMG1-214ENST00000568038 ESPNB1AK53 854 aa10.13□□□□□ -0.79
SMG1-214ENST00000568038 PHKG2P15735 406 aa10.13□□□□□ -0.79
SMG1-214ENST00000568038 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
SMG1-214ENST00000568038 PDE3BQ13370 1112 aa10.13□□□□□ -0.79
SMG1-214ENST00000568038 DCTN1Q14203 1278 aa10.13□□□□□ -0.79
SMG1-214ENST00000568038 AKAP4Q5JQC9 854 aa10.13□□□□□ -0.79
SMG1-214ENST00000568038 IFNL2Q8IZJ0 200 aa10.13□□□□□ -0.79
SMG1-214ENST00000568038 RTF1Q92541 710 aaKnown RBP10.13□□□□□ -0.79
SMG1-214ENST00000568038 STK17AQ9UEE5 414 aa10.13□□□□□ -0.79
SMG1-214ENST00000568038 WNK3Q9BYP7 1800 aa10.12□□□□□ -0.79
SMG1-214ENST00000568038 LILRA1O75019 489 aa10.12□□□□□ -0.79
SMG1-214ENST00000568038 PTSQ03393 145 aa10.12□□□□□ -0.79
SMG1-214ENST00000568038 MPRIPQ6WCQ1 1025 aa10.12□□□□□ -0.79
SMG1-214ENST00000568038 MCM10Q7L590 875 aa10.12□□□□□ -0.79
SMG1-214ENST00000568038 MTMR14Q8NCE2 650 aa10.12□□□□□ -0.79
SMG1-214ENST00000568038 TNS2Q63HR2 1409 aa10.12□□□□□ -0.79
SMG1-214ENST00000568038 MAP3K5Q99683 1374 aa10.12□□□□□ -0.79
SMG1-214ENST00000568038 PKD1L3Q7Z443 1732 aa10.11□□□□□ -0.79
SMG1-214ENST00000568038 LMOD3Q0VAK6 560 aa10.11□□□□□ -0.79
SMG1-214ENST00000568038 FAM182BQ5T319 152 aa10.11□□□□□ -0.79
SMG1-214ENST00000568038 MARCH10Q8NA82 808 aaPredicted RBP10.11□□□□□ -0.79
SMG1-214ENST00000568038 THUMPD2Q9BTF0 503 aaKnown RBP10.11□□□□□ -0.79
SMG1-214ENST00000568038 LGR6Q9HBX8 967 aa10.11□□□□□ -0.79
SMG1-214ENST00000568038 PLEKHG2Q9H7P9 1386 aa10.11□□□□□ -0.79
SMG1-214ENST00000568038 THSD7AQ9UPZ6 1657 aa10.1□□□□□ -0.79
SMG1-214ENST00000568038 DLG5Q8TDM6 1919 aa10.1□□□□□ -0.79
SMG1-214ENST00000568038 RNMTO43148 476 aaKnown RBP10.1□□□□□ -0.79
SMG1-214ENST00000568038 ADH1AP07327 375 aa10.1□□□□□ -0.79
SMG1-214ENST00000568038 HSP90AB1P08238 724 aaKnown RBP10.1□□□□□ -0.79
SMG1-214ENST00000568038 KRT27Q7Z3Y8 459 aa10.1□□□□□ -0.79
SMG1-214ENST00000568038 WWC1Q8IX03 1113 aa10.1□□□□□ -0.79
SMG1-214ENST00000568038 IL17REQ8NFR9 667 aa10.1□□□□□ -0.79
SMG1-214ENST00000568038 NDUFB9Q9Y6M9 179 aa10.1□□□□□ -0.79
SMG1-214ENST00000568038 LRRC37A3O60309 1634 aa10.1□□□□□ -0.79
SMG1-214ENST00000568038 HTATSF1O43719 755 aaKnown RBP10.09□□□□□ -0.79
SMG1-214ENST00000568038 PTGIRP43119 386 aa10.09□□□□□ -0.79
SMG1-214ENST00000568038 NR1H3Q13133 447 aa10.09□□□□□ -0.79
SMG1-214ENST00000568038 CCDC27Q2M243 656 aa10.09□□□□□ -0.79
SMG1-214ENST00000568038 NGEFQ8N5V2 710 aa10.09□□□□□ -0.79
SMG1-214ENST00000568038 DCAF5Q96JK2 942 aa10.09□□□□□ -0.79
SMG1-214ENST00000568038 SHANK3Q9BYB0 1731 aa10.09□□□□□ -0.79
SMG1-214ENST00000568038 RGS12O14924 1447 aa10.08□□□□□ -0.8
SMG1-214ENST00000568038 ZSCAN1Q8NBB4 408 aa10.08□□□□□ -0.8
SMG1-214ENST00000568038 ACSBG1Q96GR2 724 aa10.08□□□□□ -0.8
SMG1-214ENST00000568038 LAS1LQ9Y4W2 734 aaKnown RBP10.08□□□□□ -0.8
SMG1-214ENST00000568038 KDM6AO15550 1401 aaPredicted RBP10.07□□□□□ -0.8
SMG1-214ENST00000568038 CABP4P57796 275 aa10.07□□□□□ -0.8
SMG1-214ENST00000568038 TEFQ10587 303 aa10.07□□□□□ -0.8
SMG1-214ENST00000568038 SYTL4Q96C24 671 aaPredicted RBP10.07□□□□□ -0.8
SMG1-214ENST00000568038 ZNF330Q9Y3S2 320 aaPredicted RBP10.07□□□□□ -0.8
SMG1-214ENST00000568038 BRWD3Q6RI45 1802 aa10.07□□□□□ -0.8
SMG1-214ENST00000568038 ZBED9Q6R2W3 1325 aa10.07□□□□□ -0.8
SMG1-214ENST00000568038 KAT6BQ8WYB5 2073 aa10.06□□□□□ -0.8
SMG1-214ENST00000568038 CEMIPQ8WUJ3 1361 aa10.06□□□□□ -0.8
SMG1-214ENST00000568038 APBB1O00213 710 aa10.06□□□□□ -0.8
SMG1-214ENST00000568038 VSIG8P0DPA2 414 aa10.06□□□□□ -0.8
SMG1-214ENST00000568038 WDR63Q8IWG1 891 aa10.06□□□□□ -0.8
SMG1-214ENST00000568038 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
SMG1-214ENST00000568038 NFATC2IPQ8NCF5 419 aa10.06□□□□□ -0.8
SMG1-214ENST00000568038 MIS18AQ9NYP9 233 aa10.06□□□□□ -0.8
SMG1-214ENST00000568038 ZNF521Q96K83 1311 aa10.06□□□□□ -0.8
SMG1-214ENST00000568038 ERVV-2B6SEH9 535 aa10.05□□□□□ -0.8
SMG1-214ENST00000568038 CALD1Q05682 793 aaKnown RBP10.05□□□□□ -0.8
SMG1-214ENST00000568038 TAF7Q15545 349 aaPredicted RBP10.05□□□□□ -0.8
SMG1-214ENST00000568038 RNF20Q5VTR2 975 aa10.05□□□□□ -0.8
SMG1-214ENST00000568038 FAM196AQ6ZSG2 479 aa10.05□□□□□ -0.8
SMG1-214ENST00000568038 KDF1Q8NAX2 398 aaPredicted RBP10.05□□□□□ -0.8
SMG1-214ENST00000568038 RNF217Q8TC41 542 aa10.05□□□□□ -0.8
SMG1-214ENST00000568038 SLC52A2Q9HAB3 445 aa10.05□□□□□ -0.8
SMG1-214ENST00000568038 MEN1O00255 615 aa10.04□□□□□ -0.8
SMG1-214ENST00000568038 KCNQ2O43526 872 aa10.04□□□□□ -0.8
SMG1-214ENST00000568038 GPR37L1O60883 481 aa10.04□□□□□ -0.8
SMG1-214ENST00000568038 GPR161Q8N6U8 529 aaKnown RBP10.04□□□□□ -0.8
SMG1-214ENST00000568038 PIGBQ92521 554 aa10.04□□□□□ -0.8
SMG1-214ENST00000568038 TMOD3Q9NYL9 352 aa10.04□□□□□ -0.8
SMG1-214ENST00000568038 PCDHB11Q9Y5F2 797 aa10.04□□□□□ -0.8
SMG1-214ENST00000568038 SCN11AQ9UI33 1791 aa10.03□□□□□ -0.8
SMG1-214ENST00000568038 VIRMAQ69YN4 1812 aaKnown RBP10.03□□□□□ -0.8
SMG1-214ENST00000568038 FAM181BA6NEQ2 426 aa10.03□□□□□ -0.8
SMG1-214ENST00000568038 BTBD11A6QL63 1104 aa10.03□□□□□ -0.8
SMG1-214ENST00000568038 ATP5J2-PTCD1G3V325 749 aa10.03□□□□□ -0.8
SMG1-214ENST00000568038 GNAI1P63096 354 aa10.03□□□□□ -0.8
SMG1-214ENST00000568038 SLC39A6Q13433 755 aa10.03□□□□□ -0.8
SMG1-214ENST00000568038 FOXD4L5Q5VV16 416 aaPredicted RBP10.03□□□□□ -0.8
SMG1-214ENST00000568038 PTF1AQ7RTS3 328 aa10.03□□□□□ -0.8
SMG1-214ENST00000568038 PRICKLE2Q7Z3G6 844 aa10.03□□□□□ -0.8
SMG1-214ENST00000568038 TSPYL4Q9UJ04 414 aa10.03□□□□□ -0.8
SMG1-214ENST00000568038 TBC1D2BQ9UPU7 963 aa10.03□□□□□ -0.8
SMG1-214ENST00000568038 IL16Q14005 1332 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms