RNA–Protein interactions for RNA: ENST00000567838.1

THSD4-206, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 2

Gene THSD4, Length 2,645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-206ENST00000567838 CLIP2Q9UDT6 1046 aa14.31□□□□□ -0.12
THSD4-206ENST00000567838 TBC1D2BQ9UPU7 963 aa14.31□□□□□ -0.12
THSD4-206ENST00000567838 SHANK3Q9BYB0 1731 aa14.31□□□□□ -0.12
THSD4-206ENST00000567838 LAMB4A4D0S4 1761 aa14.3□□□□□ -0.12
THSD4-206ENST00000567838 BLOC1S2Q6QNY1 142 aa14.3□□□□□ -0.12
THSD4-206ENST00000567838 KIF18AQ8NI77 898 aa14.3□□□□□ -0.12
THSD4-206ENST00000567838 LEO1Q8WVC0 666 aaPredicted RBP14.3□□□□□ -0.12
THSD4-206ENST00000567838 RBM8AQ9Y5S9 174 aaKnown RBP14.3□□□□□ -0.12
THSD4-206ENST00000567838 ZNF165P49910 485 aa14.3□□□□□ -0.12
THSD4-206ENST00000567838 EAF2Q96CJ1 260 aaPredicted RBP14.3□□□□□ -0.12
THSD4-206ENST00000567838 SLFN14P0C7P3 912 aa14.29□□□□□ -0.12
THSD4-206ENST00000567838 CEP135Q66GS9 1140 aa14.29□□□□□ -0.12
THSD4-206ENST00000567838 DNAJC25Q9H1X3 360 aa14.29□□□□□ -0.12
THSD4-206ENST00000567838 TFIP11Q9UBB9 837 aaKnown RBP14.29□□□□□ -0.12
THSD4-206ENST00000567838 NHSL1Q5SYE7 1610 aa14.29□□□□□ -0.12
THSD4-206ENST00000567838 RFX7Q2KHR2 1363 aa14.29□□□□□ -0.12
THSD4-206ENST00000567838 NR1I2O75469 434 aa14.29□□□□□ -0.12
THSD4-206ENST00000567838 COL9A3Q14050 684 aaPredicted RBP14.29□□□□□ -0.12
THSD4-206ENST00000567838 HLFQ16534 295 aa14.29□□□□□ -0.12
THSD4-206ENST00000567838 TSGA10IPQ3SY00 556 aa14.29□□□□□ -0.12
THSD4-206ENST00000567838 FAM89AQ96GI7 184 aa14.29□□□□□ -0.12
THSD4-206ENST00000567838 NGLY1Q96IV0 654 aa14.29□□□□□ -0.12
THSD4-206ENST00000567838 JCADQ9P266 1359 aa14.28□□□□□ -0.12
THSD4-206ENST00000567838 ERVV-2B6SEH9 535 aa14.28□□□□□ -0.12
THSD4-206ENST00000567838 LMBR1LQ6UX01 489 aa14.28□□□□□ -0.12
THSD4-206ENST00000567838 PGBD1Q96JS3 809 aa14.28□□□□□ -0.12
THSD4-206ENST00000567838 PLEKHG2Q9H7P9 1386 aa14.28□□□□□ -0.12
THSD4-206ENST00000567838 SLC27A2O14975 620 aa14.28□□□□□ -0.12
THSD4-206ENST00000567838 NEMFO60524 1076 aa14.28□□□□□ -0.12
THSD4-206ENST00000567838 RBM6P78332 1123 aaKnown RBP14.28□□□□□ -0.12
THSD4-206ENST00000567838 SLFNL1Q499Z3 407 aa14.28□□□□□ -0.12
THSD4-206ENST00000567838 SARM1Q6SZW1 724 aa14.28□□□□□ -0.12
THSD4-206ENST00000567838 LRRC8AQ8IWT6 810 aa14.28□□□□□ -0.12
THSD4-206ENST00000567838 MARCH10Q8NA82 808 aaPredicted RBP14.28□□□□□ -0.12
THSD4-206ENST00000567838 DDB1Q16531 1140 aa14.27□□□□□ -0.13
THSD4-206ENST00000567838 ZNF397Q8NF99 534 aaPredicted RBP14.27□□□□□ -0.13
THSD4-206ENST00000567838 PLBD2Q8NHP8 589 aa14.27□□□□□ -0.13
THSD4-206ENST00000567838 ZBTB1Q9Y2K1 713 aa14.27□□□□□ -0.13
THSD4-206ENST00000567838 UBR2Q8IWV8 1755 aa14.27□□□□□ -0.13
THSD4-206ENST00000567838 RPS6KB1P23443 525 aa14.27□□□□□ -0.13
THSD4-206ENST00000567838 NYAP1Q6ZVC0 841 aa14.27□□□□□ -0.13
THSD4-206ENST00000567838 ZNF592Q92610 1267 aa14.27□□□□□ -0.13
THSD4-206ENST00000567838 ZSCAN16Q9H4T2 348 aaPredicted RBP14.27□□□□□ -0.13
THSD4-206ENST00000567838 TOGARAM1Q9Y4F4 1720 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 KCPQ6ZWJ8 1503 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 LTBP4Q8N2S1 1624 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 USP27XA6NNY8 438 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 IQCB1Q15051 598 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 KMT5BQ4FZB7 885 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 BICD2Q8TD16 824 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 CHMP4CQ96CF2 233 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 BOLA2Q9H3K6 86 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 FAM53CQ9NYF3 392 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 CFAP45Q9UL16 551 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 MED23Q9ULK4 1368 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 CTAGE5O15320 804 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 TOB2Q14106 344 aaPredicted RBP14.26□□□□□ -0.13
THSD4-206ENST00000567838 NKX1-1Q15270 411 aaPredicted RBP14.26□□□□□ -0.13
THSD4-206ENST00000567838 TERF2Q15554 542 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 KRT222Q8N1A0 295 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 MRFAP1L1Q96HT8 127 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 FAM227BQ96M60 508 aa14.26□□□□□ -0.13
THSD4-206ENST00000567838 TOM1O60784 492 aa14.25□□□□□ -0.13
THSD4-206ENST00000567838 NMIQ13287 307 aaPredicted RBP14.25□□□□□ -0.13
THSD4-206ENST00000567838 ARID5BQ14865 1188 aa14.25□□□□□ -0.13
THSD4-206ENST00000567838 TCEANC2Q96MN5 208 aa14.25□□□□□ -0.13
THSD4-206ENST00000567838 ZNF215Q9UL58 517 aaPredicted RBP14.25□□□□□ -0.13
THSD4-206ENST00000567838 FSD1Q9BTV5 496 aa14.25□□□□□ -0.13
THSD4-206ENST00000567838 PUS3Q9BZE2 481 aaKnown RBP14.25□□□□□ -0.13
THSD4-206ENST00000567838 PTPN12Q05209 780 aaKnown RBP14.24□□□□□ -0.13
THSD4-206ENST00000567838 TFCP2Q12800 502 aa14.24□□□□□ -0.13
THSD4-206ENST00000567838 PTPN14Q15678 1187 aa14.24□□□□□ -0.13
THSD4-206ENST00000567838 TICAM2Q86XR7 235 aa14.24□□□□□ -0.13
THSD4-206ENST00000567838 GOLGA6L19H0YKK7 550 aa14.24□□□□□ -0.13
THSD4-206ENST00000567838 RFX5P48382 616 aaPredicted RBP14.24□□□□□ -0.13
THSD4-206ENST00000567838 RESTQ13127 1097 aa14.24□□□□□ -0.13
THSD4-206ENST00000567838 ATL3Q6DD88 541 aa14.24□□□□□ -0.13
THSD4-206ENST00000567838 C11orf57Q6ZUT1 292 aaPredicted RBP14.24□□□□□ -0.13
THSD4-206ENST00000567838 TAF6LQ9Y6J9 622 aa14.24□□□□□ -0.13
THSD4-206ENST00000567838 COL16A1Q07092 1604 aaPredicted RBP14.23□□□□□ -0.13
THSD4-206ENST00000567838 CASP7P55210 303 aa14.23□□□□□ -0.13
THSD4-206ENST00000567838 LRRC24Q50LG9 513 aa14.23□□□□□ -0.13
THSD4-206ENST00000567838 ERO1AQ96HE7 468 aa14.23□□□□□ -0.13
THSD4-206ENST00000567838 PAPPAQ13219 1627 aa14.23□□□□□ -0.13
THSD4-206ENST00000567838 SPATA31A1Q5TZJ5 1347 aa14.23□□□□□ -0.13
THSD4-206ENST00000567838 SKILP12757 684 aa14.23□□□□□ -0.13
THSD4-206ENST00000567838 TIMM10P62072 90 aa14.23□□□□□ -0.13
THSD4-206ENST00000567838 CCZ1BP86790 482 aa14.23□□□□□ -0.13
THSD4-206ENST00000567838 CCZ1P86791 482 aaPredicted RBP14.23□□□□□ -0.13
THSD4-206ENST00000567838 BCL11BQ9C0K0 894 aaPredicted RBP14.23□□□□□ -0.13
THSD4-206ENST00000567838 PHLPP1O60346 1717 aa14.22□□□□□ -0.13
THSD4-206ENST00000567838 NUP188Q5SRE5 1749 aa14.22□□□□□ -0.13
THSD4-206ENST00000567838 STK3Q13188 491 aa14.22□□□□□ -0.13
THSD4-206ENST00000567838 DHX8Q14562 1220 aaKnown RBP14.22□□□□□ -0.13
THSD4-206ENST00000567838 USPL1Q5W0Q7 1092 aa14.22□□□□□ -0.13
THSD4-206ENST00000567838 FBXO38Q6PIJ6 1188 aa14.22□□□□□ -0.13
THSD4-206ENST00000567838 LLPHQ9BRT6 129 aaKnown RBP14.22□□□□□ -0.13
THSD4-206ENST00000567838 COPRSQ9NQ92 184 aa14.22□□□□□ -0.13
THSD4-206ENST00000567838 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.22□□□□□ -0.13
THSD4-206ENST00000567838 V9GYY5 206 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms