RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	XAGE2	Q96GT9	111 aa		11.51	□□□□□ -0.57
FANCA-223	ENST00000567284	ZNF804B	A4D1E1	1349 aa		11.51	□□□□□ -0.57
FANCA-223	ENST00000567284	FGFR2	P21802	821 aa		11.5	□□□□□ -0.57
FANCA-223	ENST00000567284	KLRK1	P26718	216 aa		11.5	□□□□□ -0.57
FANCA-223	ENST00000567284	UBE4A	Q14139	1066 aa		11.5	□□□□□ -0.57
FANCA-223	ENST00000567284	TBC1D16	Q8TBP0	767 aa		11.5	□□□□□ -0.57
FANCA-223	ENST00000567284	C7orf43	Q8WVR3	580 aa		11.5	□□□□□ -0.57
FANCA-223	ENST00000567284	LPIN2	Q92539	896 aa		11.5	□□□□□ -0.57
FANCA-223	ENST00000567284	GPR108	Q9NPR9	543 aa		11.5	□□□□□ -0.57
FANCA-223	ENST00000567284	POLL	Q9UGP5	575 aa		11.5	□□□□□ -0.57
FANCA-223	ENST00000567284	DBNL	Q9UJU6	430 aa	Known RBP	11.5	□□□□□ -0.57
FANCA-223	ENST00000567284	LEMD3	Q9Y2U8	911 aa		11.5	□□□□□ -0.57
FANCA-223	ENST00000567284	AKAP11	Q9UKA4	1901 aa		11.5	□□□□□ -0.57
FANCA-223	ENST00000567284	SBF1	O95248	1867 aa		11.49	□□□□□ -0.57
FANCA-223	ENST00000567284	GYG1	P46976	350 aa		11.49	□□□□□ -0.57
FANCA-223	ENST00000567284	TTC39A	Q5SRH9	613 aa		11.49	□□□□□ -0.57
FANCA-223	ENST00000567284	GPATCH3	Q96I76	525 aa		11.49	□□□□□ -0.57
FANCA-223	ENST00000567284	DUOX1	Q9NRD9	1551 aa		11.49	□□□□□ -0.57
FANCA-223	ENST00000567284	MYH7	P12883	1935 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284		G3V3G9	751 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	MX1	P20591	662 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	BCAM	P50895	628 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	CCDC158	Q5M9N0	1113 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	DCAF8	Q5TAQ9	597 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	SOGA3	Q5TF21	947 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	CC2D2B	Q6DHV5	1058 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	ARHGAP27	Q6ZUM4	889 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	TXNRD3	Q86VQ6	643 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	VPS37D	Q86XT2	251 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	PLEKHM2	Q8IWE5	1019 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	RTKN2	Q8IZC4	609 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	PODXL2	Q9NZ53	605 aa		11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.48	□□□□□ -0.57
FANCA-223	ENST00000567284	DICER1	Q9UPY3	1922 aa	Known RBP	11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	MAP4K4	O95819	1239 aa	Predicted RBP	11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	PHKA1	P46020	1223 aa		11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	PDE1A	P54750	535 aa		11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	RASSF7	Q02833	373 aa		11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	AOC3	Q16853	763 aa		11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	DOK7	Q18PE1	504 aa		11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	CAVIN4	Q5BKX8	364 aa		11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	SUPT20H	Q8NEM7	779 aa		11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	EYA3	Q99504	573 aa		11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	BOLA2	Q9H3K6	86 aa		11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.47	□□□□□ -0.57
FANCA-223	ENST00000567284	PPIP5K2	O43314	1243 aa		11.46	□□□□□ -0.57
FANCA-223	ENST00000567284	FRAT2	O75474	233 aa	Predicted RBP	11.46	□□□□□ -0.57
FANCA-223	ENST00000567284	HIBADH	P31937	336 aa	Known RBP	11.46	□□□□□ -0.57
FANCA-223	ENST00000567284	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
FANCA-223	ENST00000567284	GPR162	Q16538	588 aa		11.46	□□□□□ -0.57
FANCA-223	ENST00000567284	WASHC4	Q2M389	1173 aa		11.46	□□□□□ -0.57
FANCA-223	ENST00000567284	CCDC102B	Q68D86	513 aa		11.46	□□□□□ -0.57
FANCA-223	ENST00000567284	FBXW7	Q969H0	707 aa		11.46	□□□□□ -0.57
FANCA-223	ENST00000567284	SNRK	Q9NRH2	765 aa		11.46	□□□□□ -0.57
FANCA-223	ENST00000567284	ECHDC1	Q9NTX5	307 aa		11.46	□□□□□ -0.57
FANCA-223	ENST00000567284	NDUFB9	Q9Y6M9	179 aa		11.46	□□□□□ -0.57
FANCA-223	ENST00000567284	SCN9A	Q15858	1988 aa		11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	MED23	Q9ULK4	1368 aa		11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	SALL3	Q9BXA9	1300 aa		11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	ERC2	O15083	957 aa		11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	YBX3	P16989	372 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	CHAF1A	Q13111	956 aa	Predicted RBP	11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	GRIPAP1	Q4V328	841 aa		11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	ZNF804A	Q7Z570	1209 aa		11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	FAM84B	Q96KN1	310 aa	Predicted RBP	11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	DNAJC2	Q99543	621 aa	Known RBP	11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	TAOK3	Q9H2K8	898 aa		11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	DBNDD1	Q9H9R9	158 aa		11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	JAG2	Q9Y219	1238 aa		11.45	□□□□□ -0.58
FANCA-223	ENST00000567284	SNED1	Q8TER0	1413 aa		11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	TTC41P	Q6P2S7	1318 aa		11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	TRIM6-TRIM34	B2RNG4	842 aa		11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	UQCRFS1P1	P0C7P4	283 aa		11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	SCARF1	Q14162	830 aa		11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	FBXO33	Q7Z6M2	555 aa		11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	LARGE2	Q8N3Y3	721 aa		11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	RILPL2	Q969X0	211 aa		11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	GNL3L	Q9NVN8	582 aa	Known RBP	11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	STAP2	Q9UGK3	403 aa		11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	PSME4	Q14997	1843 aa		11.44	□□□□□ -0.58
FANCA-223	ENST00000567284	IRS2	Q9Y4H2	1338 aa		11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	NFKBIE	O00221	500 aa		11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	GLRX3	O76003	335 aa	Known RBP	11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	ATP5J	P18859	108 aa		11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	IARS	P41252	1262 aa	Known RBP	11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	TTC22	Q5TAA0	569 aa		11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	PI16	Q6UXB8	463 aa		11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	PI4K2B	Q8TCG2	481 aa		11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	EDC3	Q96F86	508 aa	Known RBP	11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	PSMD1	Q99460	953 aa		11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	CD209	Q9NNX6	404 aa		11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	MYH2	Q9UKX2	1941 aa		11.43	□□□□□ -0.58
FANCA-223	ENST00000567284	DOCK2	Q92608	1830 aa		11.42	□□□□□ -0.58
FANCA-223	ENST00000567284	AOX1	Q06278	1338 aa		11.42	□□□□□ -0.58
FANCA-223	ENST00000567284	ECE2	O60344	883 aa		11.42	□□□□□ -0.58
FANCA-223	ENST00000567284	ARID4A	P29374	1257 aa	Predicted RBP	11.42	□□□□□ -0.58
FANCA-223	ENST00000567284	MCAM	P43121	646 aa		11.42	□□□□□ -0.58
FANCA-223	ENST00000567284	ZAP70	P43403	619 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms