RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 BRINP3Q76B58 766 aa13.1□□□□□ -0.31
UBFD1-205ENST00000566136 DIS3Q9Y2L1 958 aaKnown RBP13.1□□□□□ -0.31
UBFD1-205ENST00000566136 JCADQ9P266 1359 aa13.09□□□□□ -0.31
UBFD1-205ENST00000566136 COL16A1Q07092 1604 aaPredicted RBP13.09□□□□□ -0.31
UBFD1-205ENST00000566136 PRPF40AO75400 957 aaKnown RBP13.09□□□□□ -0.31
UBFD1-205ENST00000566136 DKK1O94907 266 aa13.09□□□□□ -0.31
UBFD1-205ENST00000566136 AXDND1Q5T1B0 1012 aaPredicted RBP13.09□□□□□ -0.31
UBFD1-205ENST00000566136 KSR2Q6VAB6 950 aa13.09□□□□□ -0.31
UBFD1-205ENST00000566136 C1orf216Q8TAB5 229 aa13.09□□□□□ -0.31
UBFD1-205ENST00000566136 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
UBFD1-205ENST00000566136 SCINQ9Y6U3 715 aa13.09□□□□□ -0.31
UBFD1-205ENST00000566136 PPLO60437 1756 aa13.09□□□□□ -0.31
UBFD1-205ENST00000566136 GOLGA6CA6NDK9 693 aa13.08□□□□□ -0.31
UBFD1-205ENST00000566136 GOLGA6BA6NDN3 693 aa13.08□□□□□ -0.31
UBFD1-205ENST00000566136 C3orf80F5H4A9 247 aa13.08□□□□□ -0.31
UBFD1-205ENST00000566136 GOLGA6DP0CG33 693 aa13.08□□□□□ -0.31
UBFD1-205ENST00000566136 SEC13P55735 322 aa13.08□□□□□ -0.31
UBFD1-205ENST00000566136 TTF1Q15361 905 aaPredicted RBP13.08□□□□□ -0.31
UBFD1-205ENST00000566136 CC2D1AQ6P1N0 951 aaPredicted RBP13.08□□□□□ -0.31
UBFD1-205ENST00000566136 UBR7Q8N806 425 aa13.08□□□□□ -0.31
UBFD1-205ENST00000566136 EXOC6Q8TAG9 804 aa13.08□□□□□ -0.31
UBFD1-205ENST00000566136 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.31
UBFD1-205ENST00000566136 MUC3BQ9H195 1237 aa13.08□□□□□ -0.31
UBFD1-205ENST00000566136 RNF39Q9H2S5 420 aa13.08□□□□□ -0.31
UBFD1-205ENST00000566136 GOLGA6AQ9NYA3 693 aa13.08□□□□□ -0.31
UBFD1-205ENST00000566136 PUF60Q9UHX1 559 aaKnown RBP13.08□□□□□ -0.31
UBFD1-205ENST00000566136 CENPJQ9HC77 1338 aaPredicted RBP13.08□□□□□ -0.32
UBFD1-205ENST00000566136 PPP1R12AO14974 1030 aaPredicted RBP13.07□□□□□ -0.32
UBFD1-205ENST00000566136 MPSTP25325 297 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 NFE2Q16621 373 aaPredicted RBP13.07□□□□□ -0.32
UBFD1-205ENST00000566136 POTEAQ6S8J7 498 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 SUGP1Q8IWZ8 645 aaKnown RBP13.07□□□□□ -0.32
UBFD1-205ENST00000566136 TAGLN3Q9UI15 199 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 PIK3C2GO75747 1445 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 DCCP43146 1447 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 PLIN1O60240 522 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 IGHA2P01877 340 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 SRGNP10124 158 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 TRAPPC10P48553 1259 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 PLEKHM2Q8IWE5 1019 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 CKAP2LQ8IYA6 745 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 SETD1AO15047 1707 aaKnown RBP13.07□□□□□ -0.32
UBFD1-205ENST00000566136 MST1RQ04912 1400 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 ADGRL3Q9HAR2 1447 aa13.07□□□□□ -0.32
UBFD1-205ENST00000566136 INSRP06213 1382 aa13.06□□□□□ -0.32
UBFD1-205ENST00000566136 ROBO2Q9HCK4 1378 aa13.06□□□□□ -0.32
UBFD1-205ENST00000566136 COL19A1Q14993 1142 aa13.06□□□□□ -0.32
UBFD1-205ENST00000566136 C1QTNF12Q5T7M4 302 aa13.06□□□□□ -0.32
UBFD1-205ENST00000566136 C14orf93Q9H972 538 aaKnown RBP13.06□□□□□ -0.32
UBFD1-205ENST00000566136 LEMD3Q9Y2U8 911 aa13.06□□□□□ -0.32
UBFD1-205ENST00000566136 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
UBFD1-205ENST00000566136 PLEKHH1Q9ULM0 1364 aa13.06□□□□□ -0.32
UBFD1-205ENST00000566136 KRT18P05783 430 aaKnown RBP13.06□□□□□ -0.32
UBFD1-205ENST00000566136 KCTD2Q14681 263 aa13.06□□□□□ -0.32
UBFD1-205ENST00000566136 ARMC3Q5W041 872 aa13.06□□□□□ -0.32
UBFD1-205ENST00000566136 TPCN2Q8NHX9 752 aa13.06□□□□□ -0.32
UBFD1-205ENST00000566136 DAAM1Q9Y4D1 1078 aa13.06□□□□□ -0.32
UBFD1-205ENST00000566136 SLC4A8Q2Y0W8 1093 aa13.05□□□□□ -0.32
UBFD1-205ENST00000566136 EMID1Q96A84 441 aaPredicted RBP13.05□□□□□ -0.32
UBFD1-205ENST00000566136 DEPDC7Q96QD5 511 aa13.05□□□□□ -0.32
UBFD1-205ENST00000566136 ANP32EQ9BTT0 268 aa13.05□□□□□ -0.32
UBFD1-205ENST00000566136 CASS4Q9NQ75 786 aa13.05□□□□□ -0.32
UBFD1-205ENST00000566136 FRMD4BQ9Y2L6 1034 aa13.05□□□□□ -0.32
UBFD1-205ENST00000566136 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
UBFD1-205ENST00000566136 DSC3Q14574 896 aa13.05□□□□□ -0.32
UBFD1-205ENST00000566136 DDX17Q92841 729 aaKnown RBP13.05□□□□□ -0.32
UBFD1-205ENST00000566136 CEP89Q96ST8 783 aa13.05□□□□□ -0.32
UBFD1-205ENST00000566136 DNAJC7Q99615 494 aa13.05□□□□□ -0.32
UBFD1-205ENST00000566136 MRPS23Q9Y3D9 190 aaKnown RBP13.05□□□□□ -0.32
UBFD1-205ENST00000566136 PPP2R5AQ15172 486 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 PCDHGA10Q9Y5H3 936 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 ADGRB1O14514 1584 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 KIF3CO14782 793 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 FDX1P10109 184 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 COPB2P35606 906 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 VPS37AQ8NEZ2 397 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 FRMD6Q96NE9 622 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 QRICH2Q9H0J4 1663 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 LRP6O75581 1613 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
UBFD1-205ENST00000566136 RASSF7Q02833 373 aa13.03□□□□□ -0.32
UBFD1-205ENST00000566136 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
UBFD1-205ENST00000566136 RCCD1A6NED2 376 aa13.03□□□□□ -0.32
UBFD1-205ENST00000566136 RAB27AP51159 221 aa13.03□□□□□ -0.32
UBFD1-205ENST00000566136 INO80DQ53TQ3 878 aaPredicted RBP13.03□□□□□ -0.32
UBFD1-205ENST00000566136 CCSAPQ6IQ19 270 aaPredicted RBP13.03□□□□□ -0.32
UBFD1-205ENST00000566136 ANKS3Q6ZW76 656 aa13.03□□□□□ -0.32
UBFD1-205ENST00000566136 PCGF5Q86SE9 256 aa13.03□□□□□ -0.32
UBFD1-205ENST00000566136 HDAC9Q9UKV0 1011 aa13.03□□□□□ -0.32
UBFD1-205ENST00000566136 TBX3O15119 743 aa13.02□□□□□ -0.32
UBFD1-205ENST00000566136 SLC26A4O43511 780 aa13.02□□□□□ -0.32
UBFD1-205ENST00000566136 MEI1Q5TIA1 1274 aa13.02□□□□□ -0.32
UBFD1-205ENST00000566136 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.32
UBFD1-205ENST00000566136 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.32
UBFD1-205ENST00000566136 NOB1Q9ULX3 412 aaKnown RBP13.02□□□□□ -0.32
UBFD1-205ENST00000566136 ATP8A1Q9Y2Q0 1164 aa13.02□□□□□ -0.32
UBFD1-205ENST00000566136 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.32
UBFD1-205ENST00000566136 TNNT2P45379 298 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms