RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 DUOX1Q9NRD9 1551 aa15.59■□□□□ 0.09
SHCBP1-204ENST00000565887 SLC5A1P13866 664 aa15.59■□□□□ 0.09
SHCBP1-204ENST00000565887 RPS12P25398 132 aaKnown RBP15.59■□□□□ 0.09
SHCBP1-204ENST00000565887 DOK7Q18PE1 504 aa15.59■□□□□ 0.09
SHCBP1-204ENST00000565887 VGLL2Q8N8G2 317 aa15.59■□□□□ 0.09
SHCBP1-204ENST00000565887 ZNF526Q8TF50 670 aaPredicted RBP15.59■□□□□ 0.09
SHCBP1-204ENST00000565887 DBNDD1Q9H9R9 158 aa15.59■□□□□ 0.09
SHCBP1-204ENST00000565887 USP17L3A6NCW0 530 aa15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 USP17L4A6NCW7 530 aa15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 SURF6O75683 361 aaKnown RBP15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 LMOD1P29536 600 aaPredicted RBP15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 HIBADHP31937 336 aaKnown RBP15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 USP17L1Q7RTZ2 530 aa15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 VPS37DQ86XT2 251 aa15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 ERC1Q8IUD2 1116 aa15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 C16orf71Q8IYS4 520 aaPredicted RBP15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 DPF2Q92785 391 aa15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 C1orf115Q9H7X2 142 aa15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 RRAGCQ9HB90 399 aa15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 CD209Q9NNX6 404 aa15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 PA2G4Q9UQ80 394 aaKnown RBP15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 GJA3Q9Y6H8 435 aa15.58■□□□□ 0.08
SHCBP1-204ENST00000565887 TIAM2Q8IVF5 1701 aa15.57■□□□□ 0.08
SHCBP1-204ENST00000565887 YDJCA8MPS7 323 aa15.57■□□□□ 0.08
SHCBP1-204ENST00000565887 RAD17O75943 681 aa15.57■□□□□ 0.08
SHCBP1-204ENST00000565887 VIL1P09327 827 aaKnown RBP15.57■□□□□ 0.08
SHCBP1-204ENST00000565887 IL1R1P14778 569 aa15.57■□□□□ 0.08
SHCBP1-204ENST00000565887 OS9Q13438 667 aaPredicted RBP15.57■□□□□ 0.08
SHCBP1-204ENST00000565887 STRIP1Q5VSL9 837 aa15.57■□□□□ 0.08
SHCBP1-204ENST00000565887 GPR101Q96P66 508 aaPredicted RBP15.57■□□□□ 0.08
SHCBP1-204ENST00000565887 SUPT16HQ9Y5B9 1047 aaKnown RBP15.57■□□□□ 0.08
SHCBP1-204ENST00000565887 ZNF541Q9H0D2 1346 aa15.57■□□□□ 0.08
SHCBP1-204ENST00000565887 WTIPA6NIX2 430 aaPredicted RBP15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 SASH1O94885 1247 aa15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 FGFR2P21802 821 aa15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 TTLL5Q6EMB2 1281 aa15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 FBXO33Q7Z6M2 555 aa15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 PNMA8AQ86V59 439 aaPredicted RBP15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 TXNRD3Q86VQ6 643 aa15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 AGBL3Q8NEM8 1001 aa15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 FAM84BQ96KN1 310 aaPredicted RBP15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 GPR108Q9NPR9 543 aa15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 GNL3LQ9NVN8 582 aaKnown RBP15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 HACL1Q9UJ83 578 aa15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 MYO3BQ8WXR4 1341 aa15.56■□□□□ 0.08
SHCBP1-204ENST00000565887 IRS2Q9Y4H2 1338 aa15.55■□□□□ 0.08
SHCBP1-204ENST00000565887 ZBTB22O15209 634 aa15.55■□□□□ 0.08
SHCBP1-204ENST00000565887 FKBP1AP62942 108 aaKnown RBP15.55■□□□□ 0.08
SHCBP1-204ENST00000565887 ATP2B3Q16720 1220 aa15.55■□□□□ 0.08
SHCBP1-204ENST00000565887 H7C1D1 291 aa15.54■□□□□ 0.08
SHCBP1-204ENST00000565887 SNAP23O00161 211 aa15.54■□□□□ 0.08
SHCBP1-204ENST00000565887 PSMD14O00487 310 aa15.54■□□□□ 0.08
SHCBP1-204ENST00000565887 RAB11FIP3O75154 756 aa15.54■□□□□ 0.08
SHCBP1-204ENST00000565887 TDRD7Q8NHU6 1098 aaKnown RBP15.54■□□□□ 0.08
SHCBP1-204ENST00000565887 NMRK2Q9NPI5 230 aa15.54■□□□□ 0.08
SHCBP1-204ENST00000565887 GPRC5DQ9NZD1 345 aa15.54■□□□□ 0.08
SHCBP1-204ENST00000565887 WDR90Q96KV7 1748 aa15.54■□□□□ 0.08
SHCBP1-204ENST00000565887 COL4A5P29400 1685 aa15.54■□□□□ 0.08
SHCBP1-204ENST00000565887 POTECB2RU33 542 aa15.53■□□□□ 0.08
SHCBP1-204ENST00000565887 FRAT2O75474 233 aaPredicted RBP15.53■□□□□ 0.08
SHCBP1-204ENST00000565887 TOMM70O94826 608 aa15.53■□□□□ 0.08
SHCBP1-204ENST00000565887 TFCP2Q12800 502 aa15.53■□□□□ 0.08
SHCBP1-204ENST00000565887 RSBN1LQ6PCB5 846 aaPredicted RBP15.53■□□□□ 0.08
SHCBP1-204ENST00000565887 SCN4AP35499 1836 aa15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 KIF3CO14782 793 aa15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 SEMA3EO15041 775 aa15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 KLRK1P26718 216 aa15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 EPHX2P34913 555 aa15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 GYG1P46976 350 aa15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 GMPSP49915 693 aaPredicted RBP15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 USP50Q70EL3 339 aaPredicted RBP15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 OGFOD1Q8N543 542 aa15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 TBC1D22AQ8WUA7 517 aa15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 CRBNQ96SW2 442 aa15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 TAF1DQ9H5J8 278 aaPredicted RBP15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 KCNQ5Q9NR82 932 aa15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 ADARB2Q9NS39 739 aaKnown RBP15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 CNOT7Q9UIV1 285 aaKnown RBP15.52■□□□□ 0.08
SHCBP1-204ENST00000565887 ZNF609O15014 1411 aa15.51■□□□□ 0.07
SHCBP1-204ENST00000565887 FAM205AQ6ZU69 1335 aa15.51■□□□□ 0.07
SHCBP1-204ENST00000565887 SCNN1DP51172 638 aa15.51■□□□□ 0.07
SHCBP1-204ENST00000565887 TIMM10P62072 90 aa15.51■□□□□ 0.07
SHCBP1-204ENST00000565887 GTF2IP78347 998 aa15.51■□□□□ 0.07
SHCBP1-204ENST00000565887 DACT2Q5SW24 774 aa15.51■□□□□ 0.07
SHCBP1-204ENST00000565887 GORABQ5T7V8 394 aa15.51■□□□□ 0.07
SHCBP1-204ENST00000565887 SIRT2Q8IXJ6 389 aa15.51■□□□□ 0.07
SHCBP1-204ENST00000565887 RBM46Q8TBY0 533 aaKnown RBP15.51■□□□□ 0.07
SHCBP1-204ENST00000565887 NEUROD6Q96NK8 337 aa15.51■□□□□ 0.07
SHCBP1-204ENST00000565887 A0A1B0GUL7 405 aa15.5■□□□□ 0.07
SHCBP1-204ENST00000565887 USP17L8P0C7I0 530 aa15.5■□□□□ 0.07
SHCBP1-204ENST00000565887 BCAMP50895 628 aa15.5■□□□□ 0.07
SHCBP1-204ENST00000565887 FBXW7Q969H0 707 aa15.5■□□□□ 0.07
SHCBP1-204ENST00000565887 KIF1BPQ96EK5 621 aa15.5■□□□□ 0.07
SHCBP1-204ENST00000565887 GMLQ99445 158 aa15.5■□□□□ 0.07
SHCBP1-204ENST00000565887 HDAC9Q9UKV0 1011 aa15.5■□□□□ 0.07
SHCBP1-204ENST00000565887 A0A1B0GUL6 1792 aa15.49■□□□□ 0.07
SHCBP1-204ENST00000565887 EPS15P42566 896 aa15.49■□□□□ 0.07
SHCBP1-204ENST00000565887 FSTL1Q12841 308 aa15.49■□□□□ 0.07
SHCBP1-204ENST00000565887 LDHDQ86WU2 507 aa15.49■□□□□ 0.07
SHCBP1-204ENST00000565887 WDR66Q8TBY9 1149 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms