RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 FAM13BQ9NYF5 915 aa6.59□□□□□ -1.35
LINC00561-201ENST00000565815 NEURL1BA8MQ27 555 aa6.59□□□□□ -1.35
LINC00561-201ENST00000565815 CPB1P15086 417 aa6.59□□□□□ -1.35
LINC00561-201ENST00000565815 ATP2B2Q01814 1243 aa6.59□□□□□ -1.35
LINC00561-201ENST00000565815 ZNF394Q53GI3 561 aa6.59□□□□□ -1.35
LINC00561-201ENST00000565815 TTC39BQ5VTQ0 682 aaPredicted RBP6.59□□□□□ -1.35
LINC00561-201ENST00000565815 C8orf86Q6ZUL3 223 aa6.59□□□□□ -1.35
LINC00561-201ENST00000565815 NCAPG2Q86XI2 1143 aa6.59□□□□□ -1.35
LINC00561-201ENST00000565815 RASSF4Q9H2L5 321 aa6.59□□□□□ -1.35
LINC00561-201ENST00000565815 MRS2Q9HD23 443 aa6.59□□□□□ -1.35
LINC00561-201ENST00000565815 ABCC2Q92887 1545 aa6.59□□□□□ -1.35
LINC00561-201ENST00000565815 A0A1W2PP55 124 aa6.58□□□□□ -1.36
LINC00561-201ENST00000565815 HDLBPQ00341 1268 aaKnown RBP6.58□□□□□ -1.36
LINC00561-201ENST00000565815 TMEM87AQ8NBN3 555 aa6.58□□□□□ -1.36
LINC00561-201ENST00000565815 COL25A1Q9BXS0 654 aaPredicted RBP6.58□□□□□ -1.36
LINC00561-201ENST00000565815 GADD45BO75293 160 aaPredicted RBP6.58□□□□□ -1.36
LINC00561-201ENST00000565815 BMP4P12644 408 aa6.58□□□□□ -1.36
LINC00561-201ENST00000565815 TCF3P15923 654 aa6.58□□□□□ -1.36
LINC00561-201ENST00000565815 CDC25BP30305 580 aa6.58□□□□□ -1.36
LINC00561-201ENST00000565815 ZNF157P51786 506 aaPredicted RBP6.58□□□□□ -1.36
LINC00561-201ENST00000565815 DNAJB12Q9NXW2 375 aaKnown RBP6.58□□□□□ -1.36
LINC00561-201ENST00000565815 PRR12Q9ULL5 1215 aa6.58□□□□□ -1.36
LINC00561-201ENST00000565815 NFKBIEO00221 500 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 USP17L7P0C7H9 530 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 MX2P20592 715 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 SPRED3Q2MJR0 410 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 UBE2OQ9C0C9 1292 aaKnown RBP6.57□□□□□ -1.36
LINC00561-201ENST00000565815 ABCB6Q9NP58 842 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 TNIKQ9UKE5 1360 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 PTPRGP23470 1445 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 IGSF3O75054 1194 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 FANCCQ00597 558 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 LBRQ14739 615 aaKnown RBP6.57□□□□□ -1.36
LINC00561-201ENST00000565815 SV2AQ7L0J3 742 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 OSMRQ99650 979 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 TLR7Q9NYK1 1049 aaKnown RBP6.57□□□□□ -1.36
LINC00561-201ENST00000565815 TSPOAP1O95153 1857 aa6.57□□□□□ -1.36
LINC00561-201ENST00000565815 H3BM21 787 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 FCGRTP55899 365 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 COL19A1Q14993 1142 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 ZNF468Q5VIY5 522 aaPredicted RBP6.56□□□□□ -1.36
LINC00561-201ENST00000565815 ZNF787Q6DD87 383 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 ALG1LQ6GMV1 187 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 TXNDC11Q6PKC3 985 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 GALNT12Q8IXK2 581 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 CEP120Q8N960 986 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 C3orf58Q8NDZ4 430 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 NLRP2Q9NX02 1062 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 PHLDB1Q86UU1 1377 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 CUL7Q14999 1698 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 PHF20L1A8MW92 1017 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 EIF2AK2P19525 551 aaKnown RBP6.56□□□□□ -1.36
LINC00561-201ENST00000565815 TNNI2P48788 182 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 NUDT8Q8WV74 236 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 TCF12Q99081 682 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 COPRSQ9NQ92 184 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 DZANK1Q9NVP4 752 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 GGA1Q9UJY5 639 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 FAM35AQ86V20 835 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 METTL16Q86W50 562 aaKnown RBP6.56□□□□□ -1.36
LINC00561-201ENST00000565815 ASAP3Q8TDY4 903 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 LACRTQ9GZZ8 138 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 DNAJC25Q9H1X3 360 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 C12orf49Q9H741 205 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 TRIM33Q9UPN9 1127 aa6.56□□□□□ -1.36
LINC00561-201ENST00000565815 PPRC1Q5VV67 1664 aaKnown RBP6.55□□□□□ -1.36
LINC00561-201ENST00000565815 MAP3K4Q9Y6R4 1608 aa6.55□□□□□ -1.36
LINC00561-201ENST00000565815 ASXL2Q76L83 1435 aa6.55□□□□□ -1.36
LINC00561-201ENST00000565815 PERM1Q5SV97 790 aa6.55□□□□□ -1.36
LINC00561-201ENST00000565815 NANOS1Q8WY41 292 aaKnown RBP6.55□□□□□ -1.36
LINC00561-201ENST00000565815 TRERF1Q96PN7 1200 aa6.55□□□□□ -1.36
LINC00561-201ENST00000565815 EHD4Q9H223 541 aa6.55□□□□□ -1.36
LINC00561-201ENST00000565815 AK5Q9Y6K8 562 aa6.55□□□□□ -1.36
LINC00561-201ENST00000565815 RAD51AP2Q09MP3 1159 aa6.55□□□□□ -1.36
LINC00561-201ENST00000565815 HGSNATQ68CP4 663 aa6.55□□□□□ -1.36
LINC00561-201ENST00000565815 IGF1RP08069 1367 aa6.54□□□□□ -1.36
LINC00561-201ENST00000565815 PSAPP07602 524 aa6.54□□□□□ -1.36
LINC00561-201ENST00000565815 NT5DC4Q86YG4 428 aa6.54□□□□□ -1.36
LINC00561-201ENST00000565815 POP1Q99575 1024 aaKnown RBP6.54□□□□□ -1.36
LINC00561-201ENST00000565815 MUC3BQ9H195 1237 aa6.54□□□□□ -1.36
LINC00561-201ENST00000565815 MAGI3Q5TCQ9 1506 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 KIF4AO95239 1232 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 FAAP100Q0VG06 881 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 NFX1Q12986 1120 aaKnown RBP6.53□□□□□ -1.36
LINC00561-201ENST00000565815 LCE2AQ5TA79 106 aaPredicted RBP6.53□□□□□ -1.36
LINC00561-201ENST00000565815 TRPM4Q8TD43 1214 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 LIN7BQ9HAP6 207 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 UACAQ9BZF9 1416 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 EPRSP07814 1512 aaKnown RBP6.53□□□□□ -1.36
LINC00561-201ENST00000565815 PAGE1O75459 146 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 RPLP1P05386 114 aaKnown RBP6.53□□□□□ -1.36
LINC00561-201ENST00000565815 CELA3AP09093 270 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 ADH7P40394 386 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 RACK1P63244 317 aaKnown RBP6.53□□□□□ -1.36
LINC00561-201ENST00000565815 MAP3K10Q02779 954 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 MAP3K11Q16584 847 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 RASIP1Q5U651 963 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 TPTE2Q6XPS3 522 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 LPIN3Q9BQK8 851 aa6.53□□□□□ -1.36
LINC00561-201ENST00000565815 KDM5BQ9UGL1 1544 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms