RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 CHRNDQ07001 517 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 FAM161AQ3B820 660 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 TTLL5Q6EMB2 1281 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 LMBR1LQ6UX01 489 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 TXNRD3Q86VQ6 643 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 MXD3Q9BW11 206 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 SRCIN1Q9C0H9 1055 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 GBA2Q9HCG7 927 aaPredicted RBP8.13□□□□□ -1.11
TCF4-228ENST00000565393 MYOZ2Q9NPC6 264 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 GGA3Q9NZ52 723 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 DICER1Q9UPY3 1922 aaKnown RBP8.13□□□□□ -1.11
TCF4-228ENST00000565393 ASTN2O75129 1339 aaPredicted RBP8.12□□□□□ -1.11
TCF4-228ENST00000565393 GRM8O00222 908 aa8.12□□□□□ -1.11
TCF4-228ENST00000565393 ZNF157P51786 506 aaPredicted RBP8.12□□□□□ -1.11
TCF4-228ENST00000565393 CASP7P55210 303 aa8.12□□□□□ -1.11
TCF4-228ENST00000565393 ZNF280AP59817 542 aaPredicted RBP8.12□□□□□ -1.11
TCF4-228ENST00000565393 GTF2IP78347 998 aa8.12□□□□□ -1.11
TCF4-228ENST00000565393 STRIP1Q5VSL9 837 aa8.12□□□□□ -1.11
TCF4-228ENST00000565393 RGMBQ6NW40 437 aa8.12□□□□□ -1.11
TCF4-228ENST00000565393 LDHAL6AQ6ZMR3 332 aa8.12□□□□□ -1.11
TCF4-228ENST00000565393 HHIPL1Q96JK4 782 aa8.12□□□□□ -1.11
TCF4-228ENST00000565393 CNNM1Q9NRU3 951 aa8.12□□□□□ -1.11
TCF4-228ENST00000565393 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
TCF4-228ENST00000565393 SNAP23O00161 211 aa8.11□□□□□ -1.11
TCF4-228ENST00000565393 ALDH1L1O75891 902 aa8.11□□□□□ -1.11
TCF4-228ENST00000565393 HSPA8P11142 646 aaKnown RBP8.11□□□□□ -1.11
TCF4-228ENST00000565393 TTLL12Q14166 644 aaPredicted RBP8.11□□□□□ -1.11
TCF4-228ENST00000565393 NBPF9Q3BBW0 867 aa8.11□□□□□ -1.11
TCF4-228ENST00000565393 DACT2Q5SW24 774 aa8.11□□□□□ -1.11
TCF4-228ENST00000565393 PRAMEF18Q5VWM3 479 aa8.11□□□□□ -1.11
TCF4-228ENST00000565393 KIAA0825Q8IV33 1275 aa8.11□□□□□ -1.11
TCF4-228ENST00000565393 CCDC102AQ96A19 550 aa8.11□□□□□ -1.11
TCF4-228ENST00000565393 CDCA5Q96FF9 252 aa8.11□□□□□ -1.11
TCF4-228ENST00000565393 ZNF594Q96JF6 807 aaPredicted RBP8.11□□□□□ -1.11
TCF4-228ENST00000565393 GMLQ99445 158 aa8.11□□□□□ -1.11
TCF4-228ENST00000565393 HDAC9Q9UKV0 1011 aa8.11□□□□□ -1.11
TCF4-228ENST00000565393 SCAF8Q9UPN6 1271 aaKnown RBP8.11□□□□□ -1.11
TCF4-228ENST00000565393 LTBP1Q14766 1721 aa8.1□□□□□ -1.11
TCF4-228ENST00000565393 E9PSI1 815 aa8.1□□□□□ -1.11
TCF4-228ENST00000565393 KLRK1P26718 216 aa8.1□□□□□ -1.11
TCF4-228ENST00000565393 KIF23Q02241 960 aaPredicted RBP8.1□□□□□ -1.11
TCF4-228ENST00000565393 NOGQ13253 232 aa8.1□□□□□ -1.11
TCF4-228ENST00000565393 EPHA10Q5JZY3 1008 aa8.1□□□□□ -1.11
TCF4-228ENST00000565393 CD209Q9NNX6 404 aa8.1□□□□□ -1.11
TCF4-228ENST00000565393 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.1□□□□□ -1.11
TCF4-228ENST00000565393 MED23Q9ULK4 1368 aa8.1□□□□□ -1.11
TCF4-228ENST00000565393 MYO3BQ8WXR4 1341 aa8.09□□□□□ -1.11
TCF4-228ENST00000565393 F8W031 263 aaPredicted RBP8.09□□□□□ -1.11
TCF4-228ENST00000565393 UBE2Q2LH0YL09 131 aa8.09□□□□□ -1.11
TCF4-228ENST00000565393 CA12O43570 354 aa8.09□□□□□ -1.11
TCF4-228ENST00000565393 NF2P35240 595 aa8.09□□□□□ -1.11
TCF4-228ENST00000565393 RBM5P52756 815 aaKnown RBP eCLIP8.09□□□□□ -1.11
TCF4-228ENST00000565393 BRPF1P55201 1214 aaPredicted RBP8.09□□□□□ -1.11
TCF4-228ENST00000565393 SLFN5Q08AF3 891 aa8.09□□□□□ -1.11
TCF4-228ENST00000565393 PRKG1Q13976 671 aa8.09□□□□□ -1.11
TCF4-228ENST00000565393 DLGAP5Q15398 846 aa8.09□□□□□ -1.11
TCF4-228ENST00000565393 ZNF804AQ7Z570 1209 aa8.09□□□□□ -1.11
TCF4-228ENST00000565393 MRPL50Q8N5N7 158 aaKnown RBP8.09□□□□□ -1.11
TCF4-228ENST00000565393 SUCLG2Q96I99 432 aa8.09□□□□□ -1.11
TCF4-228ENST00000565393 ZIC5Q96T25 663 aa8.09□□□□□ -1.11
TCF4-228ENST00000565393 DUOX1Q9NRD9 1551 aa8.09□□□□□ -1.11
TCF4-228ENST00000565393 COL4A1P02462 1669 aa8.08□□□□□ -1.12
TCF4-228ENST00000565393 ANKRD36CQ5JPF3 1778 aa8.08□□□□□ -1.12
TCF4-228ENST00000565393 ADAMTSL1Q8N6G6 1762 aa8.08□□□□□ -1.12
TCF4-228ENST00000565393 WNT10BO00744 389 aa8.08□□□□□ -1.12
TCF4-228ENST00000565393 SASH1O94885 1247 aa8.08□□□□□ -1.12
TCF4-228ENST00000565393 NBPF7P0C2Y1 421 aaPredicted RBP8.08□□□□□ -1.12
TCF4-228ENST00000565393 MMP14P50281 582 aa8.08□□□□□ -1.12
TCF4-228ENST00000565393 FKBP1BP68106 108 aa8.08□□□□□ -1.12
TCF4-228ENST00000565393 MOB2Q70IA6 237 aa8.08□□□□□ -1.12
TCF4-228ENST00000565393 SSH1Q8WYL5 1049 aa8.08□□□□□ -1.12
TCF4-228ENST00000565393 CDCA7LQ96GN5 454 aa8.08□□□□□ -1.12
TCF4-228ENST00000565393 PUS3Q9BZE2 481 aaKnown RBP8.08□□□□□ -1.12
TCF4-228ENST00000565393 JAG2Q9Y219 1238 aa8.08□□□□□ -1.12
TCF4-228ENST00000565393 DDX60Q8IY21 1712 aaKnown RBP8.07□□□□□ -1.12
TCF4-228ENST00000565393 CCDC85CA6NKD9 419 aa8.07□□□□□ -1.12
TCF4-228ENST00000565393 FAM155AB1AL88 458 aaPredicted RBP8.07□□□□□ -1.12
TCF4-228ENST00000565393 MYO1BO43795 1136 aa8.07□□□□□ -1.12
TCF4-228ENST00000565393 FRAT2O75474 233 aaPredicted RBP8.07□□□□□ -1.12
TCF4-228ENST00000565393 TRPA1O75762 1119 aa8.07□□□□□ -1.12
TCF4-228ENST00000565393 HIBADHP31937 336 aaKnown RBP8.07□□□□□ -1.12
TCF4-228ENST00000565393 C15orf52Q6ZUT6 534 aaKnown RBP8.07□□□□□ -1.12
TCF4-228ENST00000565393 VPS37DQ86XT2 251 aa8.07□□□□□ -1.12
TCF4-228ENST00000565393 BICC1Q9H694 974 aaKnown RBP8.07□□□□□ -1.12
TCF4-228ENST00000565393 TAF1P21675 1872 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 PTPRCP08575 1304 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 ZNF521Q96K83 1311 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 PITPNM2Q9BZ72 1349 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 IL1R1P14778 569 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 GYG1P46976 350 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 CFAP100Q494V2 611 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 CAVIN4Q5BKX8 364 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 METTL24Q5JXM2 366 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 ARMC9Q7Z3E5 817 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 ABHD8Q96I13 439 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 KAZALD1Q96I82 304 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 CSRNP1Q96S65 589 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 SMC4Q9NTJ3 1288 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 RNF186Q9NXI6 227 aa8.06□□□□□ -1.12
TCF4-228ENST00000565393 RIPOR2Q9Y4F9 1068 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms