RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 NFKBIBQ15653 356 aa15.35■□□□□ 0.05
NSMCE1-208ENST00000565070 SOGA3Q5TF21 947 aa15.35■□□□□ 0.05
NSMCE1-208ENST00000565070 SLKQ9H2G2 1235 aaPredicted RBP15.35■□□□□ 0.05
NSMCE1-208ENST00000565070 ECHDC1Q9NTX5 307 aa15.35■□□□□ 0.05
NSMCE1-208ENST00000565070 EPB41L2O43491 1005 aaKnown RBP15.34■□□□□ 0.05
NSMCE1-208ENST00000565070 DALRD3Q5D0E6 543 aaKnown RBP15.34■□□□□ 0.05
NSMCE1-208ENST00000565070 GPATCH3Q96I76 525 aa15.34■□□□□ 0.05
NSMCE1-208ENST00000565070 XDHP47989 1333 aa15.34■□□□□ 0.05
NSMCE1-208ENST00000565070 IFIT2P09913 472 aaKnown RBP15.33■□□□□ 0.05
NSMCE1-208ENST00000565070 PUM3Q15397 648 aaKnown RBP15.33■□□□□ 0.05
NSMCE1-208ENST00000565070 CNTROBQ8N137 903 aa15.33■□□□□ 0.05
NSMCE1-208ENST00000565070 VGLL2Q8N8G2 317 aa15.33■□□□□ 0.05
NSMCE1-208ENST00000565070 TLR7Q9NYK1 1049 aaKnown RBP15.33■□□□□ 0.05
NSMCE1-208ENST00000565070 ANKIB1Q9P2G1 1089 aa15.33■□□□□ 0.05
NSMCE1-208ENST00000565070 TNNI3KQ59H18 835 aa15.33■□□□□ 0.04
NSMCE1-208ENST00000565070 AACSQ86V21 672 aa15.33■□□□□ 0.04
NSMCE1-208ENST00000565070 PODXL2Q9NZ53 605 aa15.33■□□□□ 0.04
NSMCE1-208ENST00000565070 LEMD3Q9Y2U8 911 aa15.33■□□□□ 0.04
NSMCE1-208ENST00000565070 FPGT-TNNI3KV9GXZ4 949 aa15.33■□□□□ 0.04
NSMCE1-208ENST00000565070 ZNF609O15014 1411 aa15.33■□□□□ 0.04
NSMCE1-208ENST00000565070 CD2BP2O95400 341 aaKnown RBP15.32■□□□□ 0.04
NSMCE1-208ENST00000565070 KCNJ4P48050 445 aa15.32■□□□□ 0.04
NSMCE1-208ENST00000565070 UBE4AQ14139 1066 aa15.32■□□□□ 0.04
NSMCE1-208ENST00000565070 ATP2B3Q16720 1220 aa15.32■□□□□ 0.04
NSMCE1-208ENST00000565070 ARFGEF1Q9Y6D6 1849 aa15.32■□□□□ 0.04
NSMCE1-208ENST00000565070 ARAP2Q8WZ64 1704 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 SLC5A1P13866 664 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 ATP2B4P23634 1241 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 NLGN2Q8NFZ4 835 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 LPIN2Q92539 896 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 SYT17Q9BSW7 474 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 LTBP1Q14766 1721 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 K7ELQ4 463 aaPredicted RBP15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 IFIT1P09914 478 aaKnown RBP15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 DDIT3P35638 169 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 RTKN2Q8IZC4 609 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 MPNDQ8N594 471 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 HELBQ8NG08 1087 aaPredicted RBP15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 C7orf43Q8WVR3 580 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 IL17RAQ96F46 866 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 GGA1Q9UJY5 639 aa15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 NSFL1CQ9UNZ2 370 aaKnown RBP15.31■□□□□ 0.04
NSMCE1-208ENST00000565070 A0A1B0GUL7 405 aa15.3■□□□□ 0.04
NSMCE1-208ENST00000565070 TAF5LO75529 589 aa15.3■□□□□ 0.04
NSMCE1-208ENST00000565070 MAP4K4O95819 1239 aaPredicted RBP15.3■□□□□ 0.04
NSMCE1-208ENST00000565070 GPSM2P81274 684 aa15.3■□□□□ 0.04
NSMCE1-208ENST00000565070 DPP8Q6V1X1 898 aaPredicted RBP15.3■□□□□ 0.04
NSMCE1-208ENST00000565070 ZNF804BA4D1E1 1349 aa15.3■□□□□ 0.04
NSMCE1-208ENST00000565070 FGFR2P21802 821 aa15.29■□□□□ 0.04
NSMCE1-208ENST00000565070 NEUROD6Q96NK8 337 aa15.29■□□□□ 0.04
NSMCE1-208ENST00000565070 CCDC8Q9H0W5 538 aaPredicted RBP15.29■□□□□ 0.04
NSMCE1-208ENST00000565070 DBNLQ9UJU6 430 aaKnown RBP15.29■□□□□ 0.04
NSMCE1-208ENST00000565070 SGSM2O43147 1006 aa15.29■□□□□ 0.04
NSMCE1-208ENST00000565070 C21orf2O43822 256 aa15.29■□□□□ 0.04
NSMCE1-208ENST00000565070 ANAPC15P60006 121 aa15.29■□□□□ 0.04
NSMCE1-208ENST00000565070 SUPT20HQ8NEM7 779 aa15.29■□□□□ 0.04
NSMCE1-208ENST00000565070 ANO2Q9NQ90 1003 aa15.29■□□□□ 0.04
NSMCE1-208ENST00000565070 BCS1LQ9Y276 419 aa15.29■□□□□ 0.04
NSMCE1-208ENST00000565070 UFL1O94874 794 aa15.28■□□□□ 0.04
NSMCE1-208ENST00000565070 GORABQ5T7V8 394 aa15.28■□□□□ 0.04
NSMCE1-208ENST00000565070 SPRYD3Q8NCJ5 442 aa15.28■□□□□ 0.04
NSMCE1-208ENST00000565070 EVI5LQ96CN4 794 aa15.28■□□□□ 0.04
NSMCE1-208ENST00000565070 EYA3Q99504 573 aa15.28■□□□□ 0.04
NSMCE1-208ENST00000565070 IL25Q9H293 177 aa15.28■□□□□ 0.04
NSMCE1-208ENST00000565070 CHMP5Q9NZZ3 219 aa15.28■□□□□ 0.04
NSMCE1-208ENST00000565070 MCCP23508 829 aa15.27■□□□□ 0.04
NSMCE1-208ENST00000565070 TIMM10P62072 90 aa15.27■□□□□ 0.04
NSMCE1-208ENST00000565070 C15orf52Q6ZUT6 534 aaKnown RBP15.27■□□□□ 0.04
NSMCE1-208ENST00000565070 TBC1D16Q8TBP0 767 aa15.27■□□□□ 0.04
NSMCE1-208ENST00000565070 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
NSMCE1-208ENST00000565070 C6orf229H3BNL8 230 aa15.27■□□□□ 0.03
NSMCE1-208ENST00000565070 FRAT2O75474 233 aaPredicted RBP15.27■□□□□ 0.03
NSMCE1-208ENST00000565070 CAVIN4Q5BKX8 364 aa15.27■□□□□ 0.03
NSMCE1-208ENST00000565070 XAGE2Q96GT9 111 aa15.27■□□□□ 0.03
NSMCE1-208ENST00000565070 PSMD1Q99460 953 aa15.27■□□□□ 0.03
NSMCE1-208ENST00000565070 DBNDD2Q9BQY9 259 aa15.27■□□□□ 0.03
NSMCE1-208ENST00000565070 RTFDC1Q9BY42 306 aaPredicted RBP15.27■□□□□ 0.03
NSMCE1-208ENST00000565070 MED23Q9ULK4 1368 aa15.27■□□□□ 0.03
NSMCE1-208ENST00000565070 SNED1Q8TER0 1413 aa15.27■□□□□ 0.03
NSMCE1-208ENST00000565070 FER1L6Q2WGJ9 1857 aa15.26■□□□□ 0.03
NSMCE1-208ENST00000565070 CCDC158Q5M9N0 1113 aa15.26■□□□□ 0.03
NSMCE1-208ENST00000565070 DUOX1Q9NRD9 1551 aa15.26■□□□□ 0.03
NSMCE1-208ENST00000565070 CIZ1Q9ULV3 898 aaPredicted RBP15.26■□□□□ 0.03
NSMCE1-208ENST00000565070 ST18O60284 1047 aa15.25■□□□□ 0.03
NSMCE1-208ENST00000565070 OLFM4Q6UX06 510 aa15.25■□□□□ 0.03
NSMCE1-208ENST00000565070 VPS33BQ9H267 617 aa15.25■□□□□ 0.03
NSMCE1-208ENST00000565070 POLLQ9UGP5 575 aa15.25■□□□□ 0.03
NSMCE1-208ENST00000565070 RAD50Q92878 1312 aa15.25■□□□□ 0.03
NSMCE1-208ENST00000565070 HSPA4P34932 840 aa15.25■□□□□ 0.03
NSMCE1-208ENST00000565070 VPS37DQ86XT2 251 aa15.25■□□□□ 0.03
NSMCE1-208ENST00000565070 IL27Q8NEV9 243 aa15.25■□□□□ 0.03
NSMCE1-208ENST00000565070 GNL3LQ9NVN8 582 aaKnown RBP15.25■□□□□ 0.03
NSMCE1-208ENST00000565070 PALD1Q9ULE6 856 aa15.25■□□□□ 0.03
NSMCE1-208ENST00000565070 UQCRFS1P1P0C7P4 283 aa15.24■□□□□ 0.03
NSMCE1-208ENST00000565070 ATP5JP18859 108 aa15.24■□□□□ 0.03
NSMCE1-208ENST00000565070 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
NSMCE1-208ENST00000565070 ZNF804AQ7Z570 1209 aa15.24■□□□□ 0.03
NSMCE1-208ENST00000565070 RUFY2Q8WXA3 655 aa15.24■□□□□ 0.03
NSMCE1-208ENST00000565070 ZC3H12CQ9C0D7 883 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms