RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 USH1CQ9Y6N9 552 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 LTN1O94822 1766 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 MRC1P22897 1456 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 TUBB4AP04350 444 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 ALDH1L2Q3SY69 923 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 TAF3Q5VWG9 929 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 PI4K2BQ8TCG2 481 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 PCDH10Q9P2E7 1040 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 PCDHAC2Q9Y5I4 1007 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 NEURL1BA8MQ27 555 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 CTDSPL2Q05D32 466 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 APOBRQ0VD83 1088 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 ZFP91Q96JP5 570 aaPredicted RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 DNAJC25Q9H1X3 360 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 TTC12Q9H892 705 aaPredicted RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 XRCC6P12956 609 aaKnown RBP eCLIP3.95□□□□□ -1.783e-6■■■□□ 16.1
CHD9-213ENST00000564845 ZAP70P43403 619 aa3.95□□□□□ -1.78
CHD9-213ENST00000564845 INTS3Q68E01 1043 aaKnown RBP3.95□□□□□ -1.78
CHD9-213ENST00000564845 KDM6AO15550 1401 aaPredicted RBP3.94□□□□□ -1.78
CHD9-213ENST00000564845 NHSL1Q5SYE7 1610 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 MCM3P25205 808 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 SNX14Q9Y5W7 946 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 ERBB4Q15303 1308 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 RBM10P98175 930 aaKnown RBP3.94□□□□□ -1.78
CHD9-213ENST00000564845 GPT2Q8TD30 523 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 PUS7LQ9H0K6 701 aaKnown RBP3.94□□□□□ -1.78
CHD9-213ENST00000564845 FAM114A2Q9NRY5 505 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 RIMBP2O15034 1052 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 EIF6P56537 245 aaKnown RBP3.94□□□□□ -1.78
CHD9-213ENST00000564845 API5Q9BZZ5 524 aaKnown RBP3.94□□□□□ -1.78
CHD9-213ENST00000564845 KCNQ5Q9NR82 932 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 BCAMP50895 628 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 GIMAP6Q6P9H5 292 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 CREBRFQ8IUR6 639 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 ATG3Q9NT62 314 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 TRMT112Q9UI30 125 aaKnown RBP3.94□□□□□ -1.78
CHD9-213ENST00000564845 CDC45O75419 566 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 GYG1P46976 350 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 DNM1Q05193 864 aaKnown RBP3.94□□□□□ -1.78
CHD9-213ENST00000564845 ESYT1Q9BSJ8 1104 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 A6NNZ2 444 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 M0R2C6 588 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 TRIM37O94972 964 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 FGD1P98174 961 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 CLUL1Q15846 466 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 TUBB8Q3ZCM7 444 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 MEX3CQ5U5Q3 659 aaKnown RBP3.94□□□□□ -1.78
CHD9-213ENST00000564845 PODNQ7Z5L7 613 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 IFNL2Q8IZJ0 200 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 GOLGA6L7A0A1B0GV03 622 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 K7ELQ4 463 aaPredicted RBP3.94□□□□□ -1.78
CHD9-213ENST00000564845 ITPK1Q13572 414 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 RABEP1Q15276 862 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 ZC3H15Q8WU90 426 aaKnown RBP3.94□□□□□ -1.78
CHD9-213ENST00000564845 CNNM1Q9NRU3 951 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 ZDHHC9Q9Y397 364 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 MRVI1Q9Y6F6 885 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 ABCC6O95255 1503 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 PES1O00541 588 aaKnown RBP3.94□□□□□ -1.78
CHD9-213ENST00000564845 NMT2O60551 498 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 DIAPH3Q9NSV4 1193 aa3.94□□□□□ -1.78
CHD9-213ENST00000564845 ADAMTS3O15072 1205 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 ABCD1P33897 745 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 ME3Q16798 604 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 SHROOM1Q2M3G4 852 aaPredicted RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 TXNRD3Q86VQ6 643 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 FMNL2Q96PY5 1086 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 MPHOSPH6Q99547 160 aaKnown RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 ZHX1Q9UKY1 873 aaPredicted RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 ERICH4A6NGS2 130 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 CLEC10AQ8IUN9 316 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 PTPN12Q05209 780 aaKnown RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 GNL2Q13823 731 aaKnown RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 JMYQ8N9B5 988 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 CCDC94Q9BW85 323 aaPredicted RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 DBF4Q9UBU7 674 aaPredicted RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 C1orf167Q5SNV9 1468 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 CCDC196A0A1B0GTZ2 297 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 ATP8B2P98198 1209 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 NOM1Q5C9Z4 860 aaKnown RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 PHKBQ93100 1093 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 POLD4Q9HCU8 107 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 TPCN1Q9ULQ1 816 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 NEDD4P46934 1319 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 FAM196BA6NMK8 535 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 G3BP1Q13283 466 aaKnown RBP eCLIP3.93□□□□□ -1.78
CHD9-213ENST00000564845 GCKRQ14397 625 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 DLK2Q6UY11 383 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 RUFY3Q7L099 469 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 STRCQ7RTU9 1775 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 PSMA5P28066 241 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 GJB2P29033 226 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 KIF24Q5T7B8 1368 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 FSD2A1L4K1 749 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 PPARDQ03181 441 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 CDC37L1Q7L3B6 337 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 EDEM3Q9BZQ6 932 aa3.93□□□□□ -1.78
CHD9-213ENST00000564845 CGNQ9P2M7 1197 aaKnown RBP3.93□□□□□ -1.78
CHD9-213ENST00000564845 SEC63Q9UGP8 760 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms