RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 OGFOD1Q8N543 542 aa15.48■□□□□ 0.07
GTF3C1-204ENST00000564664 ZNF408Q9H9D4 720 aa15.48■□□□□ 0.07
GTF3C1-204ENST00000564664 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
GTF3C1-204ENST00000564664 ZNF804BA4D1E1 1349 aa15.47■□□□□ 0.07
GTF3C1-204ENST00000564664 PITPNM2Q9BZ72 1349 aa15.47■□□□□ 0.07
GTF3C1-204ENST00000564664 ALDH1L1O75891 902 aa15.47■□□□□ 0.07
GTF3C1-204ENST00000564664 BRPF1P55201 1214 aaPredicted RBP15.47■□□□□ 0.07
GTF3C1-204ENST00000564664 NOGQ13253 232 aa15.47■□□□□ 0.07
GTF3C1-204ENST00000564664 IFIT5Q13325 482 aaKnown RBP15.47■□□□□ 0.07
GTF3C1-204ENST00000564664 SCARF1Q14162 830 aa15.47■□□□□ 0.07
GTF3C1-204ENST00000564664 CCDC102AQ96A19 550 aa15.47■□□□□ 0.07
GTF3C1-204ENST00000564664 GBA2Q9HCG7 927 aaPredicted RBP15.47■□□□□ 0.07
GTF3C1-204ENST00000564664 MYOZ2Q9NPC6 264 aa15.47■□□□□ 0.07
GTF3C1-204ENST00000564664 POLR2AP24928 1970 aaKnown RBP15.46■□□□□ 0.07
GTF3C1-204ENST00000564664 SCN9AQ15858 1988 aa15.46■□□□□ 0.07
GTF3C1-204ENST00000564664 HUNKP57058 714 aa15.46■□□□□ 0.07
GTF3C1-204ENST00000564664 GRM1Q13255 1194 aa15.46■□□□□ 0.07
GTF3C1-204ENST00000564664 FAM161AQ3B820 660 aa15.46■□□□□ 0.07
GTF3C1-204ENST00000564664 F6X3S4 739 aa15.45■□□□□ 0.06
GTF3C1-204ENST00000564664 KCNJ4P48050 445 aa15.45■□□□□ 0.06
GTF3C1-204ENST00000564664 FKBP1BP68106 108 aa15.45■□□□□ 0.06
GTF3C1-204ENST00000564664 FOXO4P98177 505 aa15.45■□□□□ 0.06
GTF3C1-204ENST00000564664 DACT2Q5SW24 774 aa15.45■□□□□ 0.06
GTF3C1-204ENST00000564664 TTLL5Q6EMB2 1281 aa15.45■□□□□ 0.06
GTF3C1-204ENST00000564664 RGMBQ6NW40 437 aa15.45■□□□□ 0.06
GTF3C1-204ENST00000564664 C15orf52Q6ZUT6 534 aaKnown RBP15.45■□□□□ 0.06
GTF3C1-204ENST00000564664 GGA3Q9NZ52 723 aa15.45■□□□□ 0.06
GTF3C1-204ENST00000564664 C9orf78Q9NZ63 289 aaPredicted RBP15.45■□□□□ 0.06
GTF3C1-204ENST00000564664 ZNF521Q96K83 1311 aa15.44■□□□□ 0.06
GTF3C1-204ENST00000564664 THSD7BQ9C0I4 1608 aa15.44■□□□□ 0.06
GTF3C1-204ENST00000564664 GRM8O00222 908 aa15.44■□□□□ 0.06
GTF3C1-204ENST00000564664 AOC2O75106 756 aa15.44■□□□□ 0.06
GTF3C1-204ENST00000564664 CHRNDQ07001 517 aa15.44■□□□□ 0.06
GTF3C1-204ENST00000564664 CCDC57Q2TAC2 916 aa15.44■□□□□ 0.06
GTF3C1-204ENST00000564664 REM2Q8IYK8 340 aaPredicted RBP15.44■□□□□ 0.06
GTF3C1-204ENST00000564664 PSME4Q14997 1843 aa15.43■□□□□ 0.06
GTF3C1-204ENST00000564664 WTIPA6NIX2 430 aaPredicted RBP15.43■□□□□ 0.06
GTF3C1-204ENST00000564664 ADM5C9JUS6 153 aa15.43■□□□□ 0.06
GTF3C1-204ENST00000564664 ANGEL2Q5VTE6 544 aaKnown RBP15.43■□□□□ 0.06
GTF3C1-204ENST00000564664 TXNRD3Q86VQ6 643 aa15.43■□□□□ 0.06
GTF3C1-204ENST00000564664 SRCIN1Q9C0H9 1055 aa15.43■□□□□ 0.06
GTF3C1-204ENST00000564664 HDAC9Q9UKV0 1011 aa15.43■□□□□ 0.06
GTF3C1-204ENST00000564664 E9PSI1 815 aa15.42■□□□□ 0.06
GTF3C1-204ENST00000564664 CAPN15O75808 1086 aa15.42■□□□□ 0.06
GTF3C1-204ENST00000564664 LMBR1LQ6UX01 489 aa15.42■□□□□ 0.06
GTF3C1-204ENST00000564664 CDCA5Q96FF9 252 aa15.42■□□□□ 0.06
GTF3C1-204ENST00000564664 ZNF157P51786 506 aaPredicted RBP15.41■□□□□ 0.06
GTF3C1-204ENST00000564664 LDHAL6AQ6ZMR3 332 aa15.41■□□□□ 0.06
GTF3C1-204ENST00000564664 CD209Q9NNX6 404 aa15.41■□□□□ 0.06
GTF3C1-204ENST00000564664 CHMP3Q9Y3E7 222 aa15.41■□□□□ 0.06
GTF3C1-204ENST00000564664 FAM155AB1AL88 458 aaPredicted RBP15.4■□□□□ 0.06
GTF3C1-204ENST00000564664 FKBP1AP62942 108 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-204ENST00000564664 TAF7LQ5H9L4 462 aa15.4■□□□□ 0.06
GTF3C1-204ENST00000564664 SLC4A10Q6U841 1118 aa15.4■□□□□ 0.06
GTF3C1-204ENST00000564664 DLK2Q6UY11 383 aa15.4■□□□□ 0.06
GTF3C1-204ENST00000564664 FBXW7Q969H0 707 aa15.4■□□□□ 0.06
GTF3C1-204ENST00000564664 ASTN2O75129 1339 aaPredicted RBP15.4■□□□□ 0.06
GTF3C1-204ENST00000564664 PTPRCP08575 1304 aa15.4■□□□□ 0.06
GTF3C1-204ENST00000564664 WNT10BO00744 389 aa15.39■□□□□ 0.05
GTF3C1-204ENST00000564664 IL1R1P14778 569 aa15.39■□□□□ 0.05
GTF3C1-204ENST00000564664 GTF2IP78347 998 aa15.39■□□□□ 0.05
GTF3C1-204ENST00000564664 ZNF804AQ7Z570 1209 aa15.39■□□□□ 0.05
GTF3C1-204ENST00000564664 CNNM1Q9NRU3 951 aa15.39■□□□□ 0.05
GTF3C1-204ENST00000564664 SAGE1Q9NXZ1 904 aa15.39■□□□□ 0.05
GTF3C1-204ENST00000564664 UTYO14607 1347 aa15.39■□□□□ 0.05
GTF3C1-204ENST00000564664 TAF5LO75529 589 aa15.38■□□□□ 0.05
GTF3C1-204ENST00000564664 NF2P35240 595 aa15.38■□□□□ 0.05
GTF3C1-204ENST00000564664 UBE4AQ14139 1066 aa15.38■□□□□ 0.05
GTF3C1-204ENST00000564664 NBPF9Q3BBW0 867 aa15.38■□□□□ 0.05
GTF3C1-204ENST00000564664 EPHA10Q5JZY3 1008 aa15.38■□□□□ 0.05
GTF3C1-204ENST00000564664 MRPL50Q8N5N7 158 aaKnown RBP15.38■□□□□ 0.05
GTF3C1-204ENST00000564664 MTMR14Q8NCE2 650 aa15.38■□□□□ 0.05
GTF3C1-204ENST00000564664 IRS2Q9Y4H2 1338 aa15.38■□□□□ 0.05
GTF3C1-204ENST00000564664 SASH1O94885 1247 aa15.37■□□□□ 0.05
GTF3C1-204ENST00000564664 SLC10A3P09131 477 aa15.37■□□□□ 0.05
GTF3C1-204ENST00000564664 KLRK1P26718 216 aa15.37■□□□□ 0.05
GTF3C1-204ENST00000564664 KIF23Q02241 960 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-204ENST00000564664 SLFN5Q08AF3 891 aa15.37■□□□□ 0.05
GTF3C1-204ENST00000564664 APOBEC3FQ8IUX4 373 aaKnown RBP15.37■□□□□ 0.05
GTF3C1-204ENST00000564664 HELBQ8NG08 1087 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-204ENST00000564664 ZBED3Q96IU2 234 aaPredicted RBP15.37■□□□□ 0.05
GTF3C1-204ENST00000564664 MXD3Q9BW11 206 aa15.37■□□□□ 0.05
GTF3C1-204ENST00000564664 SPEF2Q9C093 1822 aa15.37■□□□□ 0.05
GTF3C1-204ENST00000564664 ALDH1L2Q3SY69 923 aa15.36■□□□□ 0.05
GTF3C1-204ENST00000564664 KIAA0825Q8IV33 1275 aa15.36■□□□□ 0.05
GTF3C1-204ENST00000564664 CT47B1P0C2W7 299 aaPredicted RBP15.35■□□□□ 0.05
GTF3C1-204ENST00000564664 DLGAP5Q15398 846 aa15.35■□□□□ 0.05
GTF3C1-204ENST00000564664 ABHD8Q96I13 439 aa15.35■□□□□ 0.05
GTF3C1-204ENST00000564664 ZNF594Q96JF6 807 aaPredicted RBP15.35■□□□□ 0.05
GTF3C1-204ENST00000564664 ZIC5Q96T25 663 aa15.35■□□□□ 0.05
GTF3C1-204ENST00000564664 MROH5Q6ZUA9 1318 aa15.35■□□□□ 0.05
GTF3C1-204ENST00000564664 MYO1BO43795 1136 aa15.34■□□□□ 0.05
GTF3C1-204ENST00000564664 PLIN1O60240 522 aa15.34■□□□□ 0.05
GTF3C1-204ENST00000564664 NBPF7P0C2Y1 421 aaPredicted RBP15.34■□□□□ 0.05
GTF3C1-204ENST00000564664 RABL6Q3YEC7 729 aaPredicted RBP15.34■□□□□ 0.05
GTF3C1-204ENST00000564664 KAZALD1Q96I82 304 aa15.34■□□□□ 0.05
GTF3C1-204ENST00000564664 SUCLG2Q96I99 432 aa15.34■□□□□ 0.05
GTF3C1-204ENST00000564664 CSRNP1Q96S65 589 aa15.34■□□□□ 0.05
GTF3C1-204ENST00000564664 RIPOR2Q9Y4F9 1068 aa15.34■□□□□ 0.05
GTF3C1-204ENST00000564664 PPP2R3BQ9Y5P8 575 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms