RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 APLP1P51693 650 aa10.4□□□□□ -0.74
NSMCE1-207ENST00000564342 RARSP54136 660 aaKnown RBP10.4□□□□□ -0.74
NSMCE1-207ENST00000564342 BRPF1P55201 1214 aaPredicted RBP10.4□□□□□ -0.74
NSMCE1-207ENST00000564342 LMBR1LQ6UX01 489 aa10.4□□□□□ -0.74
NSMCE1-207ENST00000564342 LDHDQ86WU2 507 aa10.4□□□□□ -0.74
NSMCE1-207ENST00000564342 SUCLG2Q96I99 432 aa10.4□□□□□ -0.74
NSMCE1-207ENST00000564342 ZC3H12CQ9C0D7 883 aaKnown RBP10.4□□□□□ -0.74
NSMCE1-207ENST00000564342 LMOD1P29536 600 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 EPS15P42566 896 aa10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 GMPSP49915 693 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 CCT4P50991 539 aaKnown RBP10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 TNIP1Q15025 636 aa10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 DOK7Q18PE1 504 aa10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 EAPPQ56P03 285 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 PNMA8AQ86V59 439 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 MPHOSPH8Q99549 860 aa10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 GPRC5DQ9NZD1 345 aa10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 NOB1Q9ULX3 412 aaKnown RBP10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 MED23Q9ULK4 1368 aa10.39□□□□□ -0.75
NSMCE1-207ENST00000564342 SEC24BO95487 1268 aa10.38□□□□□ -0.75
NSMCE1-207ENST00000564342 IFIT5Q13325 482 aaKnown RBP10.38□□□□□ -0.75
NSMCE1-207ENST00000564342 USP44Q9H0E7 712 aa10.38□□□□□ -0.75
NSMCE1-207ENST00000564342 KCNQ5Q9NR82 932 aa10.38□□□□□ -0.75
NSMCE1-207ENST00000564342 CHMP3Q9Y3E7 222 aa10.38□□□□□ -0.75
NSMCE1-207ENST00000564342 ZBED9Q6R2W3 1325 aa10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 PSMD14O00487 310 aa10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 ZNF609O15014 1411 aa10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 HTRA3P83110 453 aa10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 CHRNDQ07001 517 aa10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 CCDC57Q2TAC2 916 aa10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 RABL6Q3YEC7 729 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 USP50Q70EL3 339 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 ZNF594Q96JF6 807 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 API5Q9BZZ5 524 aaKnown RBP10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 ANKRD2Q9GZV1 360 aa10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 ADARB2Q9NS39 739 aaKnown RBP10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 LEMD3Q9Y2U8 911 aa10.37□□□□□ -0.75
NSMCE1-207ENST00000564342 ZNF804BA4D1E1 1349 aa10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 KIF16BQ96L93 1317 aa10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 PASKQ96RG2 1323 aa10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 SHTN1A0MZ66 631 aa10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 ITGBL1O95965 494 aaPredicted RBP10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 KLRK1P26718 216 aa10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 MAP1SQ66K74 1059 aaPredicted RBP10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 TXNRD3Q86VQ6 643 aa10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 DNAJC5GQ8N7S2 189 aa10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 ANKRD44Q8N8A2 993 aa10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 ARHGAP45Q92619 1136 aa10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 DPF2Q92785 391 aa10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 BICC1Q9H694 974 aaKnown RBP10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 TRPM7Q96QT4 1865 aa10.36□□□□□ -0.75
NSMCE1-207ENST00000564342 IRS2Q9Y4H2 1338 aa10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 G3V3G9 751 aa10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 TAF5LO75529 589 aa10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 BCAR3O75815 825 aa10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 VIL1P09327 827 aaKnown RBP10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 RPS12P25398 132 aaKnown RBP10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 TAF7LQ5H9L4 462 aa10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 DCAF8Q5TAQ9 597 aa10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 LDHAL6AQ6ZMR3 332 aa10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 PODNQ7Z5L7 613 aa10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 MICALL2Q8IY33 904 aa10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 SLAIN1Q8ND83 568 aa10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 BMP2KQ9NSY1 1161 aaPredicted RBP10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 CNOT7Q9UIV1 285 aaKnown RBP10.35□□□□□ -0.75
NSMCE1-207ENST00000564342 SNAP23O00161 211 aa10.34□□□□□ -0.75
NSMCE1-207ENST00000564342 HIRAP54198 1017 aaPredicted RBP10.34□□□□□ -0.75
NSMCE1-207ENST00000564342 CNTROBQ8N137 903 aa10.34□□□□□ -0.75
NSMCE1-207ENST00000564342 HELBQ8NG08 1087 aaPredicted RBP10.34□□□□□ -0.75
NSMCE1-207ENST00000564342 TRPM4Q8TD43 1214 aa10.34□□□□□ -0.75
NSMCE1-207ENST00000564342 TMEM121BQ9BXQ6 578 aaPredicted RBP10.34□□□□□ -0.75
NSMCE1-207ENST00000564342 PUS3Q9BZE2 481 aaKnown RBP10.34□□□□□ -0.75
NSMCE1-207ENST00000564342 COA1Q9GZY4 146 aa10.34□□□□□ -0.75
NSMCE1-207ENST00000564342 CNNM1Q9NRU3 951 aa10.34□□□□□ -0.75
NSMCE1-207ENST00000564342 TNNQ9UQP3 1299 aa10.34□□□□□ -0.75
NSMCE1-207ENST00000564342 H7C1D1 291 aa10.33□□□□□ -0.76
NSMCE1-207ENST00000564342 EGFRP00533 1210 aa10.33□□□□□ -0.76
NSMCE1-207ENST00000564342 KCNJ4P48050 445 aa10.33□□□□□ -0.76
NSMCE1-207ENST00000564342 INTS3Q68E01 1043 aaKnown RBP10.33□□□□□ -0.76
NSMCE1-207ENST00000564342 RSBN1LQ6PCB5 846 aaPredicted RBP10.33□□□□□ -0.76
NSMCE1-207ENST00000564342 C15orf52Q6ZUT6 534 aaKnown RBP10.33□□□□□ -0.76
NSMCE1-207ENST00000564342 SAMD7Q7Z3H4 446 aa10.33□□□□□ -0.76
NSMCE1-207ENST00000564342 GMLQ99445 158 aa10.33□□□□□ -0.76
NSMCE1-207ENST00000564342 PGAP2Q9UHJ9 254 aa10.33□□□□□ -0.76
NSMCE1-207ENST00000564342 RIPOR2Q9Y4F9 1068 aa10.33□□□□□ -0.76
NSMCE1-207ENST00000564342 POLR2AP24928 1970 aaKnown RBP10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 USP17L3A6NCW0 530 aa10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 USP17L4A6NCW7 530 aa10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 UBTFL1P0CB47 393 aaPredicted RBP10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 TRIM27P14373 513 aa10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 RFX5P48382 616 aaPredicted RBP10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 DACT2Q5SW24 774 aa10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 ATF7IPQ6VMQ6 1270 aa10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 USP17L1Q7RTZ2 530 aa10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 AGBL3Q8NEM8 1001 aa10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 KLHDC4Q8TBB5 520 aa10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 KLRG1Q96E93 195 aa10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 MEIS3Q99687 375 aa10.32□□□□□ -0.76
NSMCE1-207ENST00000564342 CD209Q9NNX6 404 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms