RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 L3MBTL3Q96JM7 780 aaPredicted RBP22.78■■□□□ 1.24
PKD1-227ENST00000564313 PCDH10Q9P2E7 1040 aa22.78■■□□□ 1.24
PKD1-227ENST00000564313 RIPOR2Q9Y4F9 1068 aa22.78■■□□□ 1.24
PKD1-227ENST00000564313 PLIN1O60240 522 aa22.77■■□□□ 1.24
PKD1-227ENST00000564313 ECE2O60344 883 aa22.77■■□□□ 1.24
PKD1-227ENST00000564313 PTPN12Q05209 780 aaKnown RBP22.77■■□□□ 1.24
PKD1-227ENST00000564313 TNIP1Q15025 636 aa22.77■■□□□ 1.24
PKD1-227ENST00000564313 SCN4AP35499 1836 aa22.76■■□□□ 1.23
PKD1-227ENST00000564313 IQCA1LA6NCM1 817 aa22.76■■□□□ 1.23
PKD1-227ENST00000564313 EYA2O00167 538 aa22.76■■□□□ 1.23
PKD1-227ENST00000564313 SRGAP3O43295 1099 aa22.76■■□□□ 1.23
PKD1-227ENST00000564313 CIAO1O76071 339 aa22.76■■□□□ 1.23
PKD1-227ENST00000564313 ITGBL1O95965 494 aaPredicted RBP22.76■■□□□ 1.23
PKD1-227ENST00000564313 CIAPIN1Q6FI81 312 aa22.76■■□□□ 1.23
PKD1-227ENST00000564313 C15orf52Q6ZUT6 534 aaKnown RBP22.76■■□□□ 1.23
PKD1-227ENST00000564313 PUS3Q9BZE2 481 aaKnown RBP22.76■■□□□ 1.23
PKD1-227ENST00000564313 DBNDD1Q9H9R9 158 aa22.76■■□□□ 1.23
PKD1-227ENST00000564313 TAF5LO75529 589 aa22.75■■□□□ 1.23
PKD1-227ENST00000564313 UBE4AQ14139 1066 aa22.75■■□□□ 1.23
PKD1-227ENST00000564313 PODNQ7Z5L7 613 aa22.75■■□□□ 1.23
PKD1-227ENST00000564313 GPR101Q96P66 508 aaPredicted RBP22.75■■□□□ 1.23
PKD1-227ENST00000564313 COA1Q9GZY4 146 aa22.75■■□□□ 1.23
PKD1-227ENST00000564313 TAF1DQ9H5J8 278 aaPredicted RBP22.75■■□□□ 1.23
PKD1-227ENST00000564313 COPRSQ9NQ92 184 aa22.75■■□□□ 1.23
PKD1-227ENST00000564313 GJA3Q9Y6H8 435 aa22.75■■□□□ 1.23
PKD1-227ENST00000564313 CXCL9Q07325 125 aa22.74■■□□□ 1.23
PKD1-227ENST00000564313 LRRC24Q50LG9 513 aa22.74■■□□□ 1.23
PKD1-227ENST00000564313 METTL24Q5JXM2 366 aa22.74■■□□□ 1.23
PKD1-227ENST00000564313 HELBQ8NG08 1087 aaPredicted RBP22.74■■□□□ 1.23
PKD1-227ENST00000564313 KLHDC4Q8TBB5 520 aa22.74■■□□□ 1.23
PKD1-227ENST00000564313 YDJCA8MPS7 323 aa22.73■■□□□ 1.23
PKD1-227ENST00000564313 DOK7Q18PE1 504 aa22.73■■□□□ 1.23
PKD1-227ENST00000564313 COG6Q9Y2V7 657 aa22.73■■□□□ 1.23
PKD1-227ENST00000564313 IL15P40933 162 aaPredicted RBP22.72■■□□□ 1.23
PKD1-227ENST00000564313 MLLT1Q03111 559 aaPredicted RBP22.72■■□□□ 1.23
PKD1-227ENST00000564313 WTIPA6NIX2 430 aaPredicted RBP22.71■■□□□ 1.23
PKD1-227ENST00000564313 PDE8BO95263 885 aa22.71■■□□□ 1.23
PKD1-227ENST00000564313 LMOD1P29536 600 aaPredicted RBP22.71■■□□□ 1.23
PKD1-227ENST00000564313 ZNF804AQ7Z570 1209 aa22.71■■□□□ 1.23
PKD1-227ENST00000564313 VGLL2Q8N8G2 317 aa22.71■■□□□ 1.23
PKD1-227ENST00000564313 HACL1Q9UJ83 578 aa22.71■■□□□ 1.23
PKD1-227ENST00000564313 PSME4Q14997 1843 aa22.71■■□□□ 1.23
PKD1-227ENST00000564313 RASSF10A6NK89 507 aa22.7■■□□□ 1.22
PKD1-227ENST00000564313 RAD17O75943 681 aa22.7■■□□□ 1.22
PKD1-227ENST00000564313 RRP1P56182 461 aaKnown RBP22.7■■□□□ 1.22
PKD1-227ENST00000564313 ATP8B2P98198 1209 aa22.7■■□□□ 1.22
PKD1-227ENST00000564313 DEFB115Q30KQ5 88 aa22.7■■□□□ 1.22
PKD1-227ENST00000564313 IRS2Q9Y4H2 1338 aa22.69■■□□□ 1.22
PKD1-227ENST00000564313 CCDC85CA6NKD9 419 aa22.69■■□□□ 1.22
PKD1-227ENST00000564313 RPS12P25398 132 aaKnown RBP22.69■■□□□ 1.22
PKD1-227ENST00000564313 RGS19P49795 217 aa22.69■■□□□ 1.22
PKD1-227ENST00000564313 PUM3Q15397 648 aaKnown RBP22.69■■□□□ 1.22
PKD1-227ENST00000564313 EAPPQ56P03 285 aaPredicted RBP22.69■■□□□ 1.22
PKD1-227ENST00000564313 ATG9AQ7Z3C6 839 aa22.69■■□□□ 1.22
PKD1-227ENST00000564313 TXNRD3Q86VQ6 643 aa22.69■■□□□ 1.22
PKD1-227ENST00000564313 SIL1Q9H173 461 aa22.69■■□□□ 1.22
PKD1-227ENST00000564313 CEP126Q9P2H0 1117 aa22.69■■□□□ 1.22
PKD1-227ENST00000564313 ZNF609O15014 1411 aa22.68■■□□□ 1.22
PKD1-227ENST00000564313 PNMA6EA0A0J9YXQ4 647 aa22.68■■□□□ 1.22
PKD1-227ENST00000564313 PSMD14O00487 310 aa22.68■■□□□ 1.22
PKD1-227ENST00000564313 MAP2K1Q02750 393 aaPredicted RBP22.68■■□□□ 1.22
PKD1-227ENST00000564313 POLA2Q14181 598 aa22.68■■□□□ 1.22
PKD1-227ENST00000564313 SSH3Q8TE77 659 aa22.68■■□□□ 1.22
PKD1-227ENST00000564313 C1orf115Q9H7X2 142 aa22.68■■□□□ 1.22
PKD1-227ENST00000564313 ZBTB40Q9NUA8 1239 aa22.68■■□□□ 1.22
PKD1-227ENST00000564313 PA2G4Q9UQ80 394 aaKnown RBP22.68■■□□□ 1.22
PKD1-227ENST00000564313 CLEC11AQ9Y240 323 aa22.68■■□□□ 1.22
PKD1-227ENST00000564313 SCN9AQ15858 1988 aa22.67■■□□□ 1.22
PKD1-227ENST00000564313 WDR33Q9C0J8 1336 aaKnown RBP22.67■■□□□ 1.22
PKD1-227ENST00000564313 IFIT1P09914 478 aaKnown RBP22.67■■□□□ 1.22
PKD1-227ENST00000564313 KLRK1P26718 216 aa22.67■■□□□ 1.22
PKD1-227ENST00000564313 EPHX2P34913 555 aa22.67■■□□□ 1.22
PKD1-227ENST00000564313 SCNN1DP51172 638 aa22.67■■□□□ 1.22
PKD1-227ENST00000564313 C20orf194Q5TEA3 1177 aa22.67■■□□□ 1.22
PKD1-227ENST00000564313 PNMA8AQ86V59 439 aaPredicted RBP22.67■■□□□ 1.22
PKD1-227ENST00000564313 USP17L3A6NCW0 530 aa22.66■■□□□ 1.22
PKD1-227ENST00000564313 USP17L4A6NCW7 530 aa22.66■■□□□ 1.22
PKD1-227ENST00000564313 SNAP23O00161 211 aa22.66■■□□□ 1.22
PKD1-227ENST00000564313 VIL1P09327 827 aaKnown RBP22.66■■□□□ 1.22
PKD1-227ENST00000564313 USP17L1Q7RTZ2 530 aa22.66■■□□□ 1.22
PKD1-227ENST00000564313 LPIN2Q92539 896 aa22.66■■□□□ 1.22
PKD1-227ENST00000564313 DPF2Q92785 391 aa22.66■■□□□ 1.22
PKD1-227ENST00000564313 CD209Q9NNX6 404 aa22.66■■□□□ 1.22
PKD1-227ENST00000564313 KCNQ5Q9NR82 932 aa22.66■■□□□ 1.22
PKD1-227ENST00000564313 GPRC5DQ9NZD1 345 aa22.66■■□□□ 1.22
PKD1-227ENST00000564313 ADAMTSL1Q8N6G6 1762 aa22.66■■□□□ 1.22
PKD1-227ENST00000564313 SLC5A1P13866 664 aa22.65■■□□□ 1.22
PKD1-227ENST00000564313 IL1R1P14778 569 aa22.65■■□□□ 1.22
PKD1-227ENST00000564313 EPS15P42566 896 aa22.65■■□□□ 1.22
PKD1-227ENST00000564313 GMPSP49915 693 aaPredicted RBP22.65■■□□□ 1.22
PKD1-227ENST00000564313 G3BP1Q13283 466 aaKnown RBP eCLIP22.65■■□□□ 1.22
PKD1-227ENST00000564313 CAVIN4Q5BKX8 364 aa22.65■■□□□ 1.22
PKD1-227ENST00000564313 STRIP1Q5VSL9 837 aa22.65■■□□□ 1.22
PKD1-227ENST00000564313 CEP85Q6P2H3 762 aa22.65■■□□□ 1.22
PKD1-227ENST00000564313 RPAP2Q8IXW5 612 aaPredicted RBP22.65■■□□□ 1.22
PKD1-227ENST00000564313 AGBL3Q8NEM8 1001 aa22.65■■□□□ 1.22
PKD1-227ENST00000564313 MYO3BQ8WXR4 1341 aa22.64■■□□□ 1.22
PKD1-227ENST00000564313 FGFR2P21802 821 aa22.64■■□□□ 1.21
PKD1-227ENST00000564313 CNTROBQ8N137 903 aa22.64■■□□□ 1.21
PKD1-227ENST00000564313 HMMRO75330 724 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms