RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 FKBP1BP68106 108 aa13.85□□□□□ -0.19
CFDP1-203ENST00000564286 ANGEL2Q5VTE6 544 aaKnown RBP13.85□□□□□ -0.19
CFDP1-203ENST00000564286 RSBN1LQ6PCB5 846 aaPredicted RBP13.85□□□□□ -0.19
CFDP1-203ENST00000564286 CSRNP1Q96S65 589 aa13.85□□□□□ -0.19
CFDP1-203ENST00000564286 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
CFDP1-203ENST00000564286 LAMB2P55268 1798 aa13.85□□□□□ -0.19
CFDP1-203ENST00000564286 USP17L8P0C7I0 530 aa13.84□□□□□ -0.19
CFDP1-203ENST00000564286 ATN1P54259 1190 aaPredicted RBP13.84□□□□□ -0.19
CFDP1-203ENST00000564286 SOX10P56693 466 aa13.84□□□□□ -0.19
CFDP1-203ENST00000564286 ZNF280AP59817 542 aaPredicted RBP13.84□□□□□ -0.19
CFDP1-203ENST00000564286 CTU1Q7Z7A3 348 aaKnown RBP13.84□□□□□ -0.19
CFDP1-203ENST00000564286 IFNL1Q8IU54 200 aa13.84□□□□□ -0.19
CFDP1-203ENST00000564286 ANKRD18AQ8IVF6 992 aa13.84□□□□□ -0.19
CFDP1-203ENST00000564286 CHMP4AQ9BY43 222 aa13.84□□□□□ -0.19
CFDP1-203ENST00000564286 SEC31BQ9NQW1 1179 aa13.84□□□□□ -0.19
CFDP1-203ENST00000564286 PCDHB13Q9Y5F0 798 aa13.84□□□□□ -0.19
CFDP1-203ENST00000564286 USP17L3A6NCW0 530 aa13.83□□□□□ -0.2
CFDP1-203ENST00000564286 USP17L4A6NCW7 530 aa13.83□□□□□ -0.2
CFDP1-203ENST00000564286 PDE8AO60658 829 aa13.83□□□□□ -0.2
CFDP1-203ENST00000564286 PYGBP11216 843 aa13.83□□□□□ -0.2
CFDP1-203ENST00000564286 USP17L1Q7RTZ2 530 aa13.83□□□□□ -0.2
CFDP1-203ENST00000564286 CCDC191Q8NCU4 936 aa13.83□□□□□ -0.2
CFDP1-203ENST00000564286 MYD88Q99836 296 aa13.83□□□□□ -0.2
CFDP1-203ENST00000564286 MYOZ2Q9NPC6 264 aa13.83□□□□□ -0.2
CFDP1-203ENST00000564286 HDAC9Q9UKV0 1011 aa13.83□□□□□ -0.2
CFDP1-203ENST00000564286 LRRC37AA6NMS7 1700 aa13.83□□□□□ -0.2
CFDP1-203ENST00000564286 CASP8AP2Q9UKL3 1982 aa13.83□□□□□ -0.2
CFDP1-203ENST00000564286 MYBBP1AQ9BQG0 1328 aaKnown RBP13.83□□□□□ -0.2
CFDP1-203ENST00000564286 DDX58O95786 925 aaKnown RBP13.82□□□□□ -0.2
CFDP1-203ENST00000564286 PCCAP05165 728 aaPredicted RBP13.82□□□□□ -0.2
CFDP1-203ENST00000564286 ATP2B4P23634 1241 aa13.82□□□□□ -0.2
CFDP1-203ENST00000564286 CALD1Q05682 793 aaKnown RBP13.82□□□□□ -0.2
CFDP1-203ENST00000564286 TTLL12Q14166 644 aaPredicted RBP13.82□□□□□ -0.2
CFDP1-203ENST00000564286 PKN2Q16513 984 aaKnown RBP13.82□□□□□ -0.2
CFDP1-203ENST00000564286 PODNQ7Z5L7 613 aa13.82□□□□□ -0.2
CFDP1-203ENST00000564286 RASAL3Q86YV0 1011 aa13.82□□□□□ -0.2
CFDP1-203ENST00000564286 OGFOD1Q8N543 542 aa13.82□□□□□ -0.2
CFDP1-203ENST00000564286 CWC25Q9NXE8 425 aaPredicted RBP13.82□□□□□ -0.2
CFDP1-203ENST00000564286 ASTN2O75129 1339 aaPredicted RBP13.82□□□□□ -0.2
CFDP1-203ENST00000564286 XDHP47989 1333 aa13.82□□□□□ -0.2
CFDP1-203ENST00000564286 PITPNM2Q9BZ72 1349 aa13.82□□□□□ -0.2
CFDP1-203ENST00000564286 POTEB2H3BUK9 544 aa13.81□□□□□ -0.2
CFDP1-203ENST00000564286 NF2P35240 595 aa13.81□□□□□ -0.2
CFDP1-203ENST00000564286 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
CFDP1-203ENST00000564286 CDC5LQ99459 802 aaKnown RBP13.81□□□□□ -0.2
CFDP1-203ENST00000564286 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
CFDP1-203ENST00000564286 TAF1P21675 1872 aa13.8□□□□□ -0.2
CFDP1-203ENST00000564286 SPOCK2Q92563 424 aa13.8□□□□□ -0.2
CFDP1-203ENST00000564286 FBXW7Q969H0 707 aa13.8□□□□□ -0.2
CFDP1-203ENST00000564286 PHAXQ9H814 394 aaKnown RBP13.8□□□□□ -0.2
CFDP1-203ENST00000564286 ADAMTS8Q9UP79 889 aa13.8□□□□□ -0.2
CFDP1-203ENST00000564286 DDX60Q8IY21 1712 aaKnown RBP13.8□□□□□ -0.2
CFDP1-203ENST00000564286 ELL2O00472 640 aaPredicted RBP13.79□□□□□ -0.2
CFDP1-203ENST00000564286 TIE1P35590 1138 aa13.79□□□□□ -0.2
CFDP1-203ENST00000564286 GNAI1P63096 354 aa13.79□□□□□ -0.2
CFDP1-203ENST00000564286 GMLQ99445 158 aa13.79□□□□□ -0.2
CFDP1-203ENST00000564286 ZNF609O15014 1411 aa13.79□□□□□ -0.2
CFDP1-203ENST00000564286 UBE2Q2LH0YL09 131 aa13.78□□□□□ -0.2
CFDP1-203ENST00000564286 CCDC30Q5VVM6 783 aa13.78□□□□□ -0.2
CFDP1-203ENST00000564286 JARID2Q92833 1246 aaPredicted RBP13.78□□□□□ -0.2
CFDP1-203ENST00000564286 METTL22Q9BUU2 404 aaPredicted RBP13.78□□□□□ -0.2
CFDP1-203ENST00000564286 IFT57Q9NWB7 429 aa13.78□□□□□ -0.2
CFDP1-203ENST00000564286 HPS5Q9UPZ3 1129 aa13.78□□□□□ -0.2
CFDP1-203ENST00000564286 TBC1D8O95759 1140 aa13.77□□□□□ -0.21
CFDP1-203ENST00000564286 MMP14P50281 582 aa13.77□□□□□ -0.21
CFDP1-203ENST00000564286 CTSWP56202 376 aa13.77□□□□□ -0.21
CFDP1-203ENST00000564286 NEXNQ0ZGT2 675 aa13.77□□□□□ -0.21
CFDP1-203ENST00000564286 SREBF2Q12772 1141 aa13.77□□□□□ -0.21
CFDP1-203ENST00000564286 MYO3BQ8WXR4 1341 aa13.77□□□□□ -0.21
CFDP1-203ENST00000564286 BSDC1Q9NW68 430 aaPredicted RBP13.77□□□□□ -0.21
CFDP1-203ENST00000564286 TTLL13PA6NNM8 815 aa13.76□□□□□ -0.21
CFDP1-203ENST00000564286 ZNF853P0CG23 659 aa13.76□□□□□ -0.21
CFDP1-203ENST00000564286 DDX10Q13206 875 aaKnown RBP13.76□□□□□ -0.21
CFDP1-203ENST00000564286 GSE1Q14687 1217 aa13.76□□□□□ -0.21
CFDP1-203ENST00000564286 NBPF9Q3BBW0 867 aa13.76□□□□□ -0.21
CFDP1-203ENST00000564286 PRPF38BQ5VTL8 546 aaKnown RBP13.76□□□□□ -0.21
CFDP1-203ENST00000564286 PRAMEF18Q5VWM3 479 aa13.76□□□□□ -0.21
CFDP1-203ENST00000564286 MOB2Q70IA6 237 aa13.76□□□□□ -0.21
CFDP1-203ENST00000564286 ARMC9Q7Z3E5 817 aa13.76□□□□□ -0.21
CFDP1-203ENST00000564286 ZNF296Q8WUU4 475 aaPredicted RBP13.76□□□□□ -0.21
CFDP1-203ENST00000564286 COA1Q9GZY4 146 aa13.76□□□□□ -0.21
CFDP1-203ENST00000564286 SCAF8Q9UPN6 1271 aaKnown RBP13.76□□□□□ -0.21
CFDP1-203ENST00000564286 MED23Q9ULK4 1368 aa13.75□□□□□ -0.21
CFDP1-203ENST00000564286 TM4SF4P48230 202 aa13.75□□□□□ -0.21
CFDP1-203ENST00000564286 STRIP1Q5VSL9 837 aa13.75□□□□□ -0.21
CFDP1-203ENST00000564286 MINPP1Q9UNW1 487 aa13.75□□□□□ -0.21
CFDP1-203ENST00000564286 MAP3K2Q9Y2U5 619 aa13.75□□□□□ -0.21
CFDP1-203ENST00000564286 COL4A1P02462 1669 aa13.75□□□□□ -0.21
CFDP1-203ENST00000564286 PAPPA2Q9BXP8 1791 aa13.74□□□□□ -0.21
CFDP1-203ENST00000564286 GPR25O00155 361 aa13.74□□□□□ -0.21
CFDP1-203ENST00000564286 IGHMBP2P38935 993 aaKnown RBP13.74□□□□□ -0.21
CFDP1-203ENST00000564286 CCT4P50991 539 aaKnown RBP13.74□□□□□ -0.21
CFDP1-203ENST00000564286 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
CFDP1-203ENST00000564286 DACT2Q5SW24 774 aa13.74□□□□□ -0.21
CFDP1-203ENST00000564286 KSR2Q6VAB6 950 aa13.74□□□□□ -0.21
CFDP1-203ENST00000564286 APOBEC3FQ8IUX4 373 aaKnown RBP13.74□□□□□ -0.21
CFDP1-203ENST00000564286 TTLL11Q8NHH1 800 aa13.74□□□□□ -0.21
CFDP1-203ENST00000564286 STK31Q9BXU1 1019 aa13.74□□□□□ -0.21
CFDP1-203ENST00000564286 LEMD3Q9Y2U8 911 aa13.74□□□□□ -0.21
CFDP1-203ENST00000564286 WNT10BO00744 389 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms