RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 GPSM2P81274 684 aa20.88■□□□□ 0.93
CMTM3-208ENST00000564247 RHPN1Q8TCX5 695 aa20.88■□□□□ 0.93
CMTM3-208ENST00000564247 PODXL2Q9NZ53 605 aa20.88■□□□□ 0.93
CMTM3-208ENST00000564247 ZNRF3Q9ULT6 936 aa20.88■□□□□ 0.93
CMTM3-208ENST00000564247 NUCB1Q02818 461 aa20.87■□□□□ 0.93
CMTM3-208ENST00000564247 LRRC24Q50LG9 513 aa20.87■□□□□ 0.93
CMTM3-208ENST00000564247 CHD1LQ86WJ1 897 aa20.87■□□□□ 0.93
CMTM3-208ENST00000564247 PUS3Q9BZE2 481 aaKnown RBP20.87■□□□□ 0.93
CMTM3-208ENST00000564247 CEP126Q9P2H0 1117 aa20.87■□□□□ 0.93
CMTM3-208ENST00000564247 WASHC4Q2M389 1173 aa20.86■□□□□ 0.93
CMTM3-208ENST00000564247 ATG9AQ7Z3C6 839 aa20.86■□□□□ 0.93
CMTM3-208ENST00000564247 TAF1DQ9H5J8 278 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-208ENST00000564247 BSDC1Q9NW68 430 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-208ENST00000564247 POLLQ9UGP5 575 aa20.86■□□□□ 0.93
CMTM3-208ENST00000564247 HACL1Q9UJ83 578 aa20.86■□□□□ 0.93
CMTM3-208ENST00000564247 GJA3Q9Y6H8 435 aa20.86■□□□□ 0.93
CMTM3-208ENST00000564247 SPEF2Q9C093 1822 aa20.85■□□□□ 0.93
CMTM3-208ENST00000564247 C6orf229H3BNL8 230 aa20.85■□□□□ 0.93
CMTM3-208ENST00000564247 APLP1P51693 650 aa20.85■□□□□ 0.93
CMTM3-208ENST00000564247 METTL24Q5JXM2 366 aa20.85■□□□□ 0.93
CMTM3-208ENST00000564247 CLASRPQ8N2M8 674 aaKnown RBP20.85■□□□□ 0.93
CMTM3-208ENST00000564247 TBC1D16Q8TBP0 767 aa20.85■□□□□ 0.93
CMTM3-208ENST00000564247 BCL11AQ9H165 835 aa20.85■□□□□ 0.93
CMTM3-208ENST00000564247 RIPOR2Q9Y4F9 1068 aa20.85■□□□□ 0.93
CMTM3-208ENST00000564247 MROH5Q6ZUA9 1318 aa20.84■□□□□ 0.93
CMTM3-208ENST00000564247 SMARCA5O60264 1052 aaPredicted RBP20.84■□□□□ 0.93
CMTM3-208ENST00000564247 SASH1O94885 1247 aa20.84■□□□□ 0.93
CMTM3-208ENST00000564247 CXCL9Q07325 125 aa20.84■□□□□ 0.93
CMTM3-208ENST00000564247 EYA3Q99504 573 aa20.84■□□□□ 0.93
CMTM3-208ENST00000564247 LNPKQ9C0E8 428 aa20.84■□□□□ 0.93
CMTM3-208ENST00000564247 EPHX2P34913 555 aa20.83■□□□□ 0.93
CMTM3-208ENST00000564247 TFCP2Q12800 502 aa20.83■□□□□ 0.93
CMTM3-208ENST00000564247 IL1RAPL2Q9NP60 686 aa20.83■□□□□ 0.93
CMTM3-208ENST00000564247 ANKIB1Q9P2G1 1089 aa20.83■□□□□ 0.93
CMTM3-208ENST00000564247 AKAP2Q9Y2D5 859 aa20.83■□□□□ 0.93
CMTM3-208ENST00000564247 XDHP47989 1333 aa20.82■□□□□ 0.92
CMTM3-208ENST00000564247 SCNN1DP51172 638 aa20.82■□□□□ 0.92
CMTM3-208ENST00000564247 CHADLQ6NUI6 762 aa20.82■□□□□ 0.92
CMTM3-208ENST00000564247 PNMA8AQ86V59 439 aaPredicted RBP20.82■□□□□ 0.92
CMTM3-208ENST00000564247 ANKRD2Q9GZV1 360 aa20.82■□□□□ 0.92
CMTM3-208ENST00000564247 GPR108Q9NPR9 543 aa20.82■□□□□ 0.92
CMTM3-208ENST00000564247 GGA1Q9UJY5 639 aa20.82■□□□□ 0.92
CMTM3-208ENST00000564247 RIMBP2O15034 1052 aa20.81■□□□□ 0.92
CMTM3-208ENST00000564247 UFL1O94874 794 aa20.81■□□□□ 0.92
CMTM3-208ENST00000564247 POTEIP0CG38 1075 aa20.81■□□□□ 0.92
CMTM3-208ENST00000564247 POTEJP0CG39 1038 aa20.81■□□□□ 0.92
CMTM3-208ENST00000564247 LMOD1P29536 600 aaPredicted RBP20.81■□□□□ 0.92
CMTM3-208ENST00000564247 CIAPIN1Q6FI81 312 aa20.81■□□□□ 0.92
CMTM3-208ENST00000564247 LDHDQ86WU2 507 aa20.81■□□□□ 0.92
CMTM3-208ENST00000564247 ADAMTSL1Q8N6G6 1762 aa20.81■□□□□ 0.92
CMTM3-208ENST00000564247 YDJCA8MPS7 323 aa20.8■□□□□ 0.92
CMTM3-208ENST00000564247 ZC3H12CQ9C0D7 883 aaKnown RBP20.8■□□□□ 0.92
CMTM3-208ENST00000564247 MINPP1Q9UNW1 487 aa20.8■□□□□ 0.92
CMTM3-208ENST00000564247 PDE8BO95263 885 aa20.79■□□□□ 0.92
CMTM3-208ENST00000564247 IFIT2P09913 472 aaKnown RBP20.79■□□□□ 0.92
CMTM3-208ENST00000564247 ATP2B4P23634 1241 aa20.79■□□□□ 0.92
CMTM3-208ENST00000564247 CHRNDQ07001 517 aa20.79■□□□□ 0.92
CMTM3-208ENST00000564247 TNIP1Q15025 636 aa20.79■□□□□ 0.92
CMTM3-208ENST00000564247 GPR101Q96P66 508 aaPredicted RBP20.79■□□□□ 0.92
CMTM3-208ENST00000564247 RAD17O75943 681 aa20.78■□□□□ 0.92
CMTM3-208ENST00000564247 EAPPQ56P03 285 aaPredicted RBP20.78■□□□□ 0.92
CMTM3-208ENST00000564247 TNNI3KQ59H18 835 aa20.78■□□□□ 0.92
CMTM3-208ENST00000564247 AACSQ86V21 672 aa20.78■□□□□ 0.92
CMTM3-208ENST00000564247 HELBQ8NG08 1087 aaPredicted RBP20.78■□□□□ 0.92
CMTM3-208ENST00000564247 NEUROD6Q96NK8 337 aa20.78■□□□□ 0.92
CMTM3-208ENST00000564247 DBNDD1Q9H9R9 158 aa20.78■□□□□ 0.92
CMTM3-208ENST00000564247 FPGT-TNNI3KV9GXZ4 949 aa20.78■□□□□ 0.92
CMTM3-208ENST00000564247 ECE2O60344 883 aa20.77■□□□□ 0.92
CMTM3-208ENST00000564247 EPS15P42566 896 aa20.77■□□□□ 0.92
CMTM3-208ENST00000564247 GPRC5DQ9NZD1 345 aa20.77■□□□□ 0.92
CMTM3-208ENST00000564247 TAF5LO75529 589 aa20.76■□□□□ 0.91
CMTM3-208ENST00000564247 KCNJ4P48050 445 aa20.76■□□□□ 0.91
CMTM3-208ENST00000564247 GMPSP49915 693 aaPredicted RBP20.76■□□□□ 0.91
CMTM3-208ENST00000564247 PUM3Q15397 648 aaKnown RBP20.76■□□□□ 0.91
CMTM3-208ENST00000564247 ATP2B3Q16720 1220 aa20.76■□□□□ 0.91
CMTM3-208ENST00000564247 DOK7Q18PE1 504 aa20.76■□□□□ 0.91
CMTM3-208ENST00000564247 EAF2Q96CJ1 260 aaPredicted RBP20.76■□□□□ 0.91
CMTM3-208ENST00000564247 GPATCH3Q96I76 525 aa20.76■□□□□ 0.91
CMTM3-208ENST00000564247 SCN9AQ15858 1988 aa20.76■□□□□ 0.91
CMTM3-208ENST00000564247 RGS3P49796 1198 aa20.75■□□□□ 0.91
CMTM3-208ENST00000564247 USP50Q70EL3 339 aaPredicted RBP20.75■□□□□ 0.91
CMTM3-208ENST00000564247 VGLL2Q8N8G2 317 aa20.75■□□□□ 0.91
CMTM3-208ENST00000564247 LPIN2Q92539 896 aa20.75■□□□□ 0.91
CMTM3-208ENST00000564247 CCDC8Q9H0W5 538 aaPredicted RBP20.75■□□□□ 0.91
CMTM3-208ENST00000564247 CLEC11AQ9Y240 323 aa20.75■□□□□ 0.91
CMTM3-208ENST00000564247 PSME4Q14997 1843 aa20.74■□□□□ 0.91
CMTM3-208ENST00000564247 A0A1B0GUL7 405 aa20.74■□□□□ 0.91
CMTM3-208ENST00000564247 IFIT1P09914 478 aaKnown RBP20.74■□□□□ 0.91
CMTM3-208ENST00000564247 SLC5A1P13866 664 aa20.74■□□□□ 0.91
CMTM3-208ENST00000564247 PDE4AP27815 886 aa20.74■□□□□ 0.91
CMTM3-208ENST00000564247 TIMM10P62072 90 aa20.74■□□□□ 0.91
CMTM3-208ENST00000564247 UBE4AQ14139 1066 aa20.74■□□□□ 0.91
CMTM3-208ENST00000564247 GORABQ5T7V8 394 aa20.74■□□□□ 0.91
CMTM3-208ENST00000564247 ADARB2Q9NS39 739 aaKnown RBP20.74■□□□□ 0.91
CMTM3-208ENST00000564247 LEMD3Q9Y2U8 911 aa20.74■□□□□ 0.91
CMTM3-208ENST00000564247 MED23Q9ULK4 1368 aa20.73■□□□□ 0.91
CMTM3-208ENST00000564247 G3V3G9 751 aa20.73■□□□□ 0.91
CMTM3-208ENST00000564247 PSMD14O00487 310 aa20.73■□□□□ 0.91
CMTM3-208ENST00000564247 DCAF8Q5TAQ9 597 aa20.73■□□□□ 0.91
CMTM3-208ENST00000564247 DNAJC5GQ8N7S2 189 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms