RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ALX3O95076 343 aa6.69□□□□□ -1.34
HMGB1P33-201ENST00000563485 ERICH6Q7L0X2 663 aa6.69□□□□□ -1.34
HMGB1P33-201ENST00000563485 HHIPQ96QV1 700 aa6.69□□□□□ -1.34
HMGB1P33-201ENST00000563485 MRPL18Q9H0U6 180 aaKnown RBP6.69□□□□□ -1.34
HMGB1P33-201ENST00000563485 SH2B1Q9NRF2 756 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P33-201ENST00000563485 FOXD3Q9UJU5 478 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P33-201ENST00000563485 TIMELESSQ9UNS1 1208 aa6.69□□□□□ -1.34
HMGB1P33-201ENST00000563485 F8W735 103 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 NFKBIEO00221 500 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 EREGO14944 169 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 TNFRSF21O75509 655 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 H2AFB1P0C5Y9 115 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 H2AFB2P0C5Z0 115 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 EPHA1P21709 976 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 SERPINB4P48594 390 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 FOXD4L6Q3SYB3 417 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 PRSS36Q5K4E3 855 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 B4GALNT3Q6L9W6 998 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 FOXD4L3Q6VB84 417 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 RETREG2Q8NC44 543 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 CARD10Q9BWT7 1032 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 AKTIPQ9H8T0 292 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 DZANK1Q9NVP4 752 aa6.68□□□□□ -1.34
HMGB1P33-201ENST00000563485 H3BRB1 525 aa6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 TM4SF5O14894 197 aa6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 ICMTO60725 284 aa6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 PHACTR2O75167 634 aa6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 WISP1O95388 367 aa6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 PTPRAP18433 802 aa6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 GJD3Q8N144 294 aa6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 AGGF1Q8N302 714 aaeCLIP6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 SNX29Q8TEQ0 813 aa6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 ADAM19Q9H013 955 aa6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 TUT1Q9H6E5 874 aaKnown RBP6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 KCNK4Q9NYG8 393 aa6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 EGFL7Q9UHF1 273 aa6.67□□□□□ -1.34
HMGB1P33-201ENST00000563485 FSCN2O14926 492 aa6.66□□□□□ -1.34
HMGB1P33-201ENST00000563485 USP5P45974 858 aa6.66□□□□□ -1.34
HMGB1P33-201ENST00000563485 EHHADHQ08426 723 aa6.66□□□□□ -1.34
HMGB1P33-201ENST00000563485 ZMYM1Q5SVZ6 1142 aa6.66□□□□□ -1.34
HMGB1P33-201ENST00000563485 TMEM130Q8N3G9 435 aa6.66□□□□□ -1.34
HMGB1P33-201ENST00000563485 Q8N3U1 123 aa6.66□□□□□ -1.34
HMGB1P33-201ENST00000563485 DCAF11Q8TEB1 546 aa6.66□□□□□ -1.34
HMGB1P33-201ENST00000563485 PMEPA1Q969W9 287 aa6.66□□□□□ -1.34
HMGB1P33-201ENST00000563485 PDE2AO00408 941 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P33-201ENST00000563485 CD68P34810 354 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P33-201ENST00000563485 ECM1Q16610 540 aa6.65□□□□□ -1.34
HMGB1P33-201ENST00000563485 XP32Q5T750 250 aa6.65□□□□□ -1.34
HMGB1P33-201ENST00000563485 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.65□□□□□ -1.34
HMGB1P33-201ENST00000563485 OSMRQ99650 979 aa6.65□□□□□ -1.34
HMGB1P33-201ENST00000563485 ZKSCAN3Q9BRR0 538 aa6.65□□□□□ -1.34
HMGB1P33-201ENST00000563485 FAM177BA6PVY3 158 aa6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 H3BRJ5 948 aa6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 DDX3YO15523 660 aaKnown RBP6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 ADAM11O75078 769 aa6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 FAM117BQ6P1L5 589 aa6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 Q6ZS46 218 aa6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 ACAD11Q709F0 780 aa6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 GLYCTKQ8IVS8 523 aa6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 DZIP1LQ8IYY4 767 aaKnown RBP6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 TMEM102Q8N9M5 508 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 SEC31BQ9NQW1 1179 aa6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 LATS2Q9NRM7 1088 aa6.64□□□□□ -1.35
HMGB1P33-201ENST00000563485 EDN3P14138 238 aa6.63□□□□□ -1.35
HMGB1P33-201ENST00000563485 GLB1P16278 677 aa6.63□□□□□ -1.35
HMGB1P33-201ENST00000563485 CABP4P57796 275 aa6.63□□□□□ -1.35
HMGB1P33-201ENST00000563485 KLHL23Q8NBE8 558 aa6.63□□□□□ -1.35
HMGB1P33-201ENST00000563485 UBASH3BQ8TF42 649 aa6.63□□□□□ -1.35
HMGB1P33-201ENST00000563485 FOXD4L4Q8WXT5 416 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P33-201ENST00000563485 NXPE3Q969Y0 559 aa6.63□□□□□ -1.35
HMGB1P33-201ENST00000563485 KLHDC7BQ96G42 594 aa6.63□□□□□ -1.35
HMGB1P33-201ENST00000563485 SOX13Q9UN79 622 aa6.63□□□□□ -1.35
HMGB1P33-201ENST00000563485 AMOTL2Q9Y2J4 779 aa6.63□□□□□ -1.35
HMGB1P33-201ENST00000563485 POLR3DP05423 398 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P33-201ENST00000563485 PIP4K2BP78356 416 aa6.62□□□□□ -1.35
HMGB1P33-201ENST00000563485 ARHGAP4P98171 946 aa6.62□□□□□ -1.35
HMGB1P33-201ENST00000563485 PEAR1Q5VY43 1037 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P33-201ENST00000563485 HGSNATQ68CP4 663 aa6.62□□□□□ -1.35
HMGB1P33-201ENST00000563485 PRR23CQ6ZRP0 262 aa6.62□□□□□ -1.35
HMGB1P33-201ENST00000563485 TXNDC2Q86VQ3 553 aa6.62□□□□□ -1.35
HMGB1P33-201ENST00000563485 ZFYVE28Q9HCC9 887 aa6.62□□□□□ -1.35
HMGB1P33-201ENST00000563485 BRPF3Q9ULD4 1205 aa6.62□□□□□ -1.35
HMGB1P33-201ENST00000563485 DUOXA2Q1HG44 320 aa6.61□□□□□ -1.35
HMGB1P33-201ENST00000563485 KIAA1211Q6ZU35 1233 aa6.61□□□□□ -1.35
HMGB1P33-201ENST00000563485 SLC7A3Q8WY07 619 aa6.61□□□□□ -1.35
HMGB1P33-201ENST00000563485 UBL7Q96S82 380 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P33-201ENST00000563485 SCO2A0A1W2PP80 73 aa6.6□□□□□ -1.35
HMGB1P33-201ENST00000563485 NLRP12P59046 1061 aa6.6□□□□□ -1.35
HMGB1P33-201ENST00000563485 VN1R5Q7Z5H4 357 aa6.6□□□□□ -1.35
HMGB1P33-201ENST00000563485 BSNDQ8WZ55 320 aa6.6□□□□□ -1.35
HMGB1P33-201ENST00000563485 WNT8BQ93098 351 aa6.6□□□□□ -1.35
HMGB1P33-201ENST00000563485 BHLHE41Q9C0J9 482 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P33-201ENST00000563485 OSGEPQ9NPF4 335 aa6.6□□□□□ -1.35
HMGB1P33-201ENST00000563485 METTL12A8MUP2 240 aa6.59□□□□□ -1.35
HMGB1P33-201ENST00000563485 NDUFB5O43674 189 aa6.59□□□□□ -1.35
HMGB1P33-201ENST00000563485 USPL1Q5W0Q7 1092 aa6.59□□□□□ -1.35
HMGB1P33-201ENST00000563485 ASAP3Q8TDY4 903 aa6.59□□□□□ -1.35
HMGB1P33-201ENST00000563485 SOX1O00570 391 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P33-201ENST00000563485 C19orf57Q0VDD7 668 aa6.58□□□□□ -1.36
HMGB1P33-201ENST00000563485 IKBKEQ14164 716 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms