RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 A0A1B0GUL7 405 aa16.74■□□□□ 0.27
SMPD3-205ENST00000563455 PDE8BO95263 885 aa16.74■□□□□ 0.27
SMPD3-205ENST00000563455 SRGNP10124 158 aa16.74■□□□□ 0.27
SMPD3-205ENST00000563455 MCM2P49736 904 aa16.74■□□□□ 0.27
SMPD3-205ENST00000563455 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
SMPD3-205ENST00000563455 METTL24Q5JXM2 366 aa16.74■□□□□ 0.27
SMPD3-205ENST00000563455 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
SMPD3-205ENST00000563455 TAOK3Q9H2K8 898 aa16.74■□□□□ 0.27
SMPD3-205ENST00000563455 LTBP3Q9NS15 1303 aa16.73■□□□□ 0.27
SMPD3-205ENST00000563455 NFKBIEO00221 500 aa16.73■□□□□ 0.27
SMPD3-205ENST00000563455 ST18O60284 1047 aa16.73■□□□□ 0.27
SMPD3-205ENST00000563455 UQCRFS1P1P0C7P4 283 aa16.73■□□□□ 0.27
SMPD3-205ENST00000563455 NPR1P16066 1061 aa16.73■□□□□ 0.27
SMPD3-205ENST00000563455 ALDH1B1P30837 517 aa16.73■□□□□ 0.27
SMPD3-205ENST00000563455 IFFO2Q5TF58 517 aa16.73■□□□□ 0.27
SMPD3-205ENST00000563455 TSHZ3Q63HK5 1081 aa16.73■□□□□ 0.27
SMPD3-205ENST00000563455 LPIN2Q92539 896 aa16.73■□□□□ 0.27
SMPD3-205ENST00000563455 NLRP3Q96P20 1036 aa16.73■□□□□ 0.27
SMPD3-205ENST00000563455 BRCA1P38398 1863 aaKnown RBP16.73■□□□□ 0.27
SMPD3-205ENST00000563455 ZNF609O15014 1411 aa16.72■□□□□ 0.27
SMPD3-205ENST00000563455 BCORQ6W2J9 1755 aa16.72■□□□□ 0.27
SMPD3-205ENST00000563455 ZFYP08048 801 aaPredicted RBP16.72■□□□□ 0.27
SMPD3-205ENST00000563455 PUM3Q15397 648 aaKnown RBP16.72■□□□□ 0.27
SMPD3-205ENST00000563455 ATP2B3Q16720 1220 aa16.72■□□□□ 0.27
SMPD3-205ENST00000563455 LRRC24Q50LG9 513 aa16.72■□□□□ 0.27
SMPD3-205ENST00000563455 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
SMPD3-205ENST00000563455 FSD1Q9BTV5 496 aa16.72■□□□□ 0.27
SMPD3-205ENST00000563455 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
SMPD3-205ENST00000563455 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
SMPD3-205ENST00000563455 NRXN2Q9P2S2 1712 aa16.72■□□□□ 0.27
SMPD3-205ENST00000563455 RIC1Q4ADV7 1423 aa16.71■□□□□ 0.27
SMPD3-205ENST00000563455 IGSF3O75054 1194 aa16.71■□□□□ 0.27
SMPD3-205ENST00000563455 TTF1Q15361 905 aaPredicted RBP16.71■□□□□ 0.27
SMPD3-205ENST00000563455 ZSCAN25Q6NSZ9 544 aa16.71■□□□□ 0.27
SMPD3-205ENST00000563455 CCDC24Q8N4L8 307 aa16.71■□□□□ 0.27
SMPD3-205ENST00000563455 DNAJC5GQ8N7S2 189 aa16.71■□□□□ 0.27
SMPD3-205ENST00000563455 KBTBD3Q8NAB2 608 aa16.71■□□□□ 0.27
SMPD3-205ENST00000563455 ZNF594Q96JF6 807 aaPredicted RBP16.71■□□□□ 0.27
SMPD3-205ENST00000563455 BOLA2Q9H3K6 86 aa16.71■□□□□ 0.27
SMPD3-205ENST00000563455 SCN7AQ01118 1682 aa16.7■□□□□ 0.26
SMPD3-205ENST00000563455 KLRG2A4D1S0 409 aaPredicted RBP16.7■□□□□ 0.26
SMPD3-205ENST00000563455 ZBTB22O15209 634 aa16.7■□□□□ 0.26
SMPD3-205ENST00000563455 IFIT1P09914 478 aaKnown RBP16.7■□□□□ 0.26
SMPD3-205ENST00000563455 TTC39AQ5SRH9 613 aa16.7■□□□□ 0.26
SMPD3-205ENST00000563455 PRPF40BQ6NWY9 871 aaKnown RBP16.7■□□□□ 0.26
SMPD3-205ENST00000563455 SLC5A1P13866 664 aa16.69■□□□□ 0.26
SMPD3-205ENST00000563455 HCLS1P14317 486 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-205ENST00000563455 TIMM10P62072 90 aa16.69■□□□□ 0.26
SMPD3-205ENST00000563455 CCDC93Q567U6 631 aa16.69■□□□□ 0.26
SMPD3-205ENST00000563455 RNF20Q5VTR2 975 aa16.69■□□□□ 0.26
SMPD3-205ENST00000563455 TMED8Q6PL24 325 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-205ENST00000563455 ANKRD18AQ8IVF6 992 aa16.69■□□□□ 0.26
SMPD3-205ENST00000563455 RTKN2Q8IZC4 609 aa16.69■□□□□ 0.26
SMPD3-205ENST00000563455 VGLL2Q8N8G2 317 aa16.69■□□□□ 0.26
SMPD3-205ENST00000563455 XAGE2Q96GT9 111 aa16.69■□□□□ 0.26
SMPD3-205ENST00000563455 TBC1D2Q9BYX2 928 aa16.69■□□□□ 0.26
SMPD3-205ENST00000563455 PUS3Q9BZE2 481 aaKnown RBP16.69■□□□□ 0.26
SMPD3-205ENST00000563455 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
SMPD3-205ENST00000563455 BSDC1Q9NW68 430 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-205ENST00000563455 PAG1Q9NWQ8 432 aa16.69■□□□□ 0.26
SMPD3-205ENST00000563455 TLR7Q9NYK1 1049 aaKnown RBP16.69■□□□□ 0.26
SMPD3-205ENST00000563455 HSPA4P34932 840 aa16.68■□□□□ 0.26
SMPD3-205ENST00000563455 GRIPAP1Q4V328 841 aa16.68■□□□□ 0.26
SMPD3-205ENST00000563455 CC2D2BQ6DHV5 1058 aa16.68■□□□□ 0.26
SMPD3-205ENST00000563455 CWC27Q6UX04 472 aaKnown RBP16.68■□□□□ 0.26
SMPD3-205ENST00000563455 SYNE4Q8N205 404 aa16.68■□□□□ 0.26
SMPD3-205ENST00000563455 KLRG1Q96E93 195 aa16.68■□□□□ 0.26
SMPD3-205ENST00000563455 ANKRD2Q9GZV1 360 aa16.68■□□□□ 0.26
SMPD3-205ENST00000563455 MYH3P11055 1940 aa16.68■□□□□ 0.26
SMPD3-205ENST00000563455 SPEF2Q9C093 1822 aa16.68■□□□□ 0.26
SMPD3-205ENST00000563455 IQCA1LA6NCM1 817 aa16.67■□□□□ 0.26
SMPD3-205ENST00000563455 ZKSCAN1P17029 563 aaPredicted RBP16.67■□□□□ 0.26
SMPD3-205ENST00000563455 KIF2CQ99661 725 aa16.67■□□□□ 0.26
SMPD3-205ENST00000563455 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMPD3-205ENST00000563455 TMX4Q9H1E5 349 aaPredicted RBP16.67■□□□□ 0.26
SMPD3-205ENST00000563455 HMG20BQ9P0W2 317 aa16.67■□□□□ 0.26
SMPD3-205ENST00000563455 LAMB2P55268 1798 aa16.66■□□□□ 0.26
SMPD3-205ENST00000563455 FGFR2P21802 821 aa16.66■□□□□ 0.26
SMPD3-205ENST00000563455 UBE4AQ14139 1066 aa16.66■□□□□ 0.26
SMPD3-205ENST00000563455 GNL3LQ9NVN8 582 aaKnown RBP16.66■□□□□ 0.26
SMPD3-205ENST00000563455 K7ELQ4 463 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-205ENST00000563455 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-205ENST00000563455 PRELPP51888 382 aa16.65■□□□□ 0.26
SMPD3-205ENST00000563455 MCMDC2Q4G0Z9 681 aa16.65■□□□□ 0.26
SMPD3-205ENST00000563455 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
SMPD3-205ENST00000563455 C7orf43Q8WVR3 580 aa16.65■□□□□ 0.26
SMPD3-205ENST00000563455 TM6SF1Q9BZW5 370 aa16.65■□□□□ 0.26
SMPD3-205ENST00000563455 LSG1Q9H089 658 aaKnown RBP16.65■□□□□ 0.26
SMPD3-205ENST00000563455 CIZ1Q9ULV3 898 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-205ENST00000563455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.65■□□□□ 0.26
SMPD3-205ENST00000563455 CEP350Q5VT06 3117 aa16.65■□□□□ 0.26
SMPD3-205ENST00000563455 FAM177BA6PVY3 158 aa16.64■□□□□ 0.25
SMPD3-205ENST00000563455 PSMA5P28066 241 aa16.64■□□□□ 0.25
SMPD3-205ENST00000563455 ARID4AP29374 1257 aaPredicted RBP16.64■□□□□ 0.25
SMPD3-205ENST00000563455 RPS8P62241 208 aaKnown RBP16.64■□□□□ 0.25
SMPD3-205ENST00000563455 FKBP4Q02790 459 aaKnown RBP eCLIP16.64■□□□□ 0.25
SMPD3-205ENST00000563455 KRT32Q14532 448 aa16.64■□□□□ 0.25
SMPD3-205ENST00000563455 TMC4Q7Z404 712 aa16.64■□□□□ 0.25
SMPD3-205ENST00000563455 JMYQ8N9B5 988 aa16.64■□□□□ 0.25
SMPD3-205ENST00000563455 MAP4K1Q92918 833 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms