RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 FAM89AQ96GI7 184 aa10.21□□□□□ -0.77
HERPUD1-206ENST00000563343 ZNF333Q96JL9 665 aa10.21□□□□□ -0.77
HERPUD1-206ENST00000563343 PLEKHF1Q96S99 279 aa10.21□□□□□ -0.77
HERPUD1-206ENST00000563343 ISCA1Q9BUE6 129 aa10.21□□□□□ -0.77
HERPUD1-206ENST00000563343 UFL1O94874 794 aa10.2□□□□□ -0.78
HERPUD1-206ENST00000563343 PPP2R1AP30153 589 aa10.2□□□□□ -0.78
HERPUD1-206ENST00000563343 AIMP1Q12904 312 aaKnown RBP10.2□□□□□ -0.78
HERPUD1-206ENST00000563343 TTLL12Q14166 644 aaPredicted RBP10.2□□□□□ -0.78
HERPUD1-206ENST00000563343 ERO1AQ96HE7 468 aa10.2□□□□□ -0.78
HERPUD1-206ENST00000563343 PRO3102Q9H379 93 aa10.2□□□□□ -0.78
HERPUD1-206ENST00000563343 FZD1Q9UP38 647 aa10.2□□□□□ -0.78
HERPUD1-206ENST00000563343 A0A1B0GUL6 1792 aa10.19□□□□□ -0.78
HERPUD1-206ENST00000563343 MANSC4A6NHS7 340 aaPredicted RBP10.19□□□□□ -0.78
HERPUD1-206ENST00000563343 INHBEP58166 350 aa10.19□□□□□ -0.78
HERPUD1-206ENST00000563343 SEC31BQ9NQW1 1179 aa10.19□□□□□ -0.78
HERPUD1-206ENST00000563343 COL1A1P02452 1464 aaPredicted RBP10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 ALPK3Q96L96 1907 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 USP17L3A6NCW0 530 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 USP17L4A6NCW7 530 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 ZBTB48P10074 688 aaPredicted RBP10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 NF2P35240 595 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 CRHR2Q13324 411 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 PRKG1Q13976 671 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 NFE2L2Q16236 605 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 MAP3K11Q16584 847 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 DACT2Q5SW24 774 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 USP17L1Q7RTZ2 530 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 ARMC9Q7Z3E5 817 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 PODNQ7Z5L7 613 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 SLC17A8Q8NDX2 589 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 ZBED3Q96IU2 234 aaPredicted RBP10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 WNK4Q96J92 1243 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 MXD3Q9BW11 206 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 EFCC1Q9HA90 598 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 RBM27Q9P2N5 1060 aaKnown RBP10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 GGA1Q9UJY5 639 aa10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 ANGEL1Q9UNK9 670 aaKnown RBP10.18□□□□□ -0.78
HERPUD1-206ENST00000563343 WTIPA6NIX2 430 aaPredicted RBP10.17□□□□□ -0.78
HERPUD1-206ENST00000563343 GJA5P36382 358 aa10.17□□□□□ -0.78
HERPUD1-206ENST00000563343 CHRDL2Q6WN34 429 aa10.17□□□□□ -0.78
HERPUD1-206ENST00000563343 PLBD2Q8NHP8 589 aa10.17□□□□□ -0.78
HERPUD1-206ENST00000563343 CLMNQ96JQ2 1002 aa10.17□□□□□ -0.78
HERPUD1-206ENST00000563343 PTPN18Q99952 460 aa10.17□□□□□ -0.78
HERPUD1-206ENST00000563343 TSPYL4Q9UJ04 414 aa10.17□□□□□ -0.78
HERPUD1-206ENST00000563343 TESPA1A2RU30 521 aaPredicted RBP10.16□□□□□ -0.78
HERPUD1-206ENST00000563343 ATP5J2-PTCD1G3V325 749 aa10.16□□□□□ -0.78
HERPUD1-206ENST00000563343 G3V3G9 751 aa10.16□□□□□ -0.78
HERPUD1-206ENST00000563343 IRS4O14654 1257 aaPredicted RBP10.16□□□□□ -0.78
HERPUD1-206ENST00000563343 SASH1O94885 1247 aa10.16□□□□□ -0.78
HERPUD1-206ENST00000563343 TRIM28Q13263 835 aaKnown RBP10.16□□□□□ -0.78
HERPUD1-206ENST00000563343 DCAF8Q5TAQ9 597 aa10.16□□□□□ -0.78
HERPUD1-206ENST00000563343 TMEM106CQ9BVX2 250 aa10.16□□□□□ -0.78
HERPUD1-206ENST00000563343 LAMA3Q16787 3333 aa10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 MED23Q9ULK4 1368 aa10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 XDHP47989 1333 aa10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 SP3Q02447 781 aa10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 KRT24Q2M2I5 525 aa10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 RTL5Q5HYW3 569 aaPredicted RBP10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 APOBEC3FQ8IUX4 373 aaKnown RBP10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 SLC10A4Q96EP9 437 aa10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 BABAM1Q9NWV8 329 aa10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 CHPF2Q9P2E5 772 aa10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 ANKIB1Q9P2G1 1089 aa10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 PTCH2Q9Y6C5 1203 aa10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 ARAP2Q8WZ64 1704 aa10.15□□□□□ -0.78
HERPUD1-206ENST00000563343 MGAMO43451 1857 aa10.15□□□□□ -0.79
HERPUD1-206ENST00000563343 UNC80Q8N2C7 3258 aa10.14□□□□□ -0.79
HERPUD1-206ENST00000563343 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
HERPUD1-206ENST00000563343 SHISA4Q96DD7 197 aa10.14□□□□□ -0.79
HERPUD1-206ENST00000563343 MYO3BQ8WXR4 1341 aa10.13□□□□□ -0.79
HERPUD1-206ENST00000563343 UNCXA6NJT0 531 aa10.13□□□□□ -0.79
HERPUD1-206ENST00000563343 ATP2B4P23634 1241 aa10.13□□□□□ -0.79
HERPUD1-206ENST00000563343 MMP14P50281 582 aa10.13□□□□□ -0.79
HERPUD1-206ENST00000563343 SLC9C1Q4G0N8 1177 aa10.13□□□□□ -0.79
HERPUD1-206ENST00000563343 STRIP1Q5VSL9 837 aa10.13□□□□□ -0.79
HERPUD1-206ENST00000563343 UBE2Q1Q7Z7E8 422 aa10.13□□□□□ -0.79
HERPUD1-206ENST00000563343 OGFOD1Q8N543 542 aa10.13□□□□□ -0.79
HERPUD1-206ENST00000563343 ZBTB38Q8NAP3 1195 aaPredicted RBP10.13□□□□□ -0.79
HERPUD1-206ENST00000563343 DEFB129Q9H1M3 183 aa10.13□□□□□ -0.79
HERPUD1-206ENST00000563343 SOX1O00570 391 aaPredicted RBP10.12□□□□□ -0.79
HERPUD1-206ENST00000563343 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
HERPUD1-206ENST00000563343 SLC4A8Q2Y0W8 1093 aa10.12□□□□□ -0.79
HERPUD1-206ENST00000563343 NBPF11Q86T75 865 aa10.12□□□□□ -0.79
HERPUD1-206ENST00000563343 TXNRD3Q86VQ6 643 aa10.12□□□□□ -0.79
HERPUD1-206ENST00000563343 MS4A4AQ96JQ5 239 aa10.12□□□□□ -0.79
HERPUD1-206ENST00000563343 SPDYE2BA6NHP3 402 aa10.11□□□□□ -0.79
HERPUD1-206ENST00000563343 USP2O75604 605 aaPredicted RBP10.11□□□□□ -0.79
HERPUD1-206ENST00000563343 NEFMP07197 916 aa10.11□□□□□ -0.79
HERPUD1-206ENST00000563343 SPDYE6P0CI01 402 aa10.11□□□□□ -0.79
HERPUD1-206ENST00000563343 TRIM26Q12899 539 aaPredicted RBP10.11□□□□□ -0.79
HERPUD1-206ENST00000563343 SPDYE2Q495Y8 402 aa10.11□□□□□ -0.79
HERPUD1-206ENST00000563343 OTUD7BQ6GQQ9 843 aa10.11□□□□□ -0.79
HERPUD1-206ENST00000563343 SH3TC2Q8TF17 1288 aa10.11□□□□□ -0.79
HERPUD1-206ENST00000563343 PCDHAC2Q9Y5I4 1007 aa10.11□□□□□ -0.79
HERPUD1-206ENST00000563343 ZNF804BA4D1E1 1349 aa10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 AOX1Q06278 1338 aa10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 PPP1R12BO60237 982 aaPredicted RBP10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 PDE8AO60658 829 aa10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 CCDC152Q4G0S7 254 aa10.1□□□□□ -0.79
HERPUD1-206ENST00000563343 KIAA0825Q8IV33 1275 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms