RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 RASSF4Q9H2L5 321 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 PODXL2Q9NZ53 605 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 TMEM63CQ9P1W3 806 aa5.88□□□□□ -1.47
SHCBP1-202ENST00000563219 SOWAHDA6NJG2 315 aa5.87□□□□□ -1.47
SHCBP1-202ENST00000563219 ICMTO60725 284 aa5.87□□□□□ -1.47
SHCBP1-202ENST00000563219 FKBP4Q02790 459 aaKnown RBP eCLIP5.87□□□□□ -1.47
SHCBP1-202ENST00000563219 ADAMTSL4Q6UY14 1074 aa5.87□□□□□ -1.47
SHCBP1-202ENST00000563219 Q6ZS46 218 aa5.87□□□□□ -1.47
SHCBP1-202ENST00000563219 ZNF438Q7Z4V0 828 aa5.87□□□□□ -1.47
SHCBP1-202ENST00000563219 SLC51AQ86UW1 340 aa5.87□□□□□ -1.47
SHCBP1-202ENST00000563219 CNTN3Q9P232 1028 aa5.87□□□□□ -1.47
SHCBP1-202ENST00000563219 TM4SF5O14894 197 aa5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 ABL1P00519 1130 aa5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 CD68P34810 354 aaPredicted RBP5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 DNM1Q05193 864 aaKnown RBP5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 ZNF211Q13398 564 aaPredicted RBP5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 LRP8Q14114 963 aa5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 NOM1Q5C9Z4 860 aaKnown RBP5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 EDEM1Q92611 657 aa5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 POP1Q99575 1024 aaKnown RBP5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 GGNBP2Q9H3C7 697 aa5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 SALL4Q9UJQ4 1053 aa5.86□□□□□ -1.47
SHCBP1-202ENST00000563219 HYAL3O43820 417 aaPredicted RBP5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 PDGFAP04085 211 aa5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 PCSK2P16519 638 aa5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 MZF1P28698 734 aaPredicted RBP5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 ECM1Q16610 540 aa5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 TXNDC11Q6PKC3 985 aa5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 AGGF1Q8N302 714 aaeCLIP5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 C1orf127Q8N9H9 656 aa5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 KLHL23Q8NBE8 558 aa5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 ADAM19Q9H013 955 aa5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 SH2B1Q9NRF2 756 aaPredicted RBP5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 RNF112Q9ULX5 631 aa5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.85□□□□□ -1.47
SHCBP1-202ENST00000563219 H3BRB1 525 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 FSCN2O14926 492 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 FAM13AO94988 1023 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 PTPRAP18433 802 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 EPHA1P21709 976 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 CES1P23141 567 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 CDC25BP30305 580 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 EIF1AXP47813 144 aaKnown RBP5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 MTMR3Q13615 1198 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 FAM117BQ6P1L5 589 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 SND1Q7KZF4 910 aaKnown RBP eCLIP5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 GLYCTKQ8IVS8 523 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 TTC16Q8NEE8 873 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 PMEPA1Q969W9 287 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 UBL7Q96S82 380 aaPredicted RBP5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 TUT1Q9H6E5 874 aaKnown RBP5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 KCNK4Q9NYG8 393 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 KANSL3Q9P2N6 904 aa5.84□□□□□ -1.47
SHCBP1-202ENST00000563219 NFKBIEO00221 500 aa5.83□□□□□ -1.48
SHCBP1-202ENST00000563219 WISP1O95388 367 aa5.83□□□□□ -1.48
SHCBP1-202ENST00000563219 GLB1P16278 677 aa5.83□□□□□ -1.48
SHCBP1-202ENST00000563219 MPSTP25325 297 aa5.83□□□□□ -1.48
SHCBP1-202ENST00000563219 C8orf34Q49A92 452 aa5.83□□□□□ -1.48
SHCBP1-202ENST00000563219 ALKBH2Q6NS38 261 aa5.83□□□□□ -1.48
SHCBP1-202ENST00000563219 NBPF11Q86T75 865 aa5.83□□□□□ -1.48
SHCBP1-202ENST00000563219 CARD10Q9BWT7 1032 aa5.83□□□□□ -1.48
SHCBP1-202ENST00000563219 GZF1Q9H116 711 aaPredicted RBP5.83□□□□□ -1.48
SHCBP1-202ENST00000563219 ANO2Q9NQ90 1003 aa5.83□□□□□ -1.48
SHCBP1-202ENST00000563219 DZANK1Q9NVP4 752 aa5.83□□□□□ -1.48
SHCBP1-202ENST00000563219 A6NHS1 94 aa5.82□□□□□ -1.48
SHCBP1-202ENST00000563219 FAM177BA6PVY3 158 aa5.82□□□□□ -1.48
SHCBP1-202ENST00000563219 FSTP19883 344 aa5.82□□□□□ -1.48
SHCBP1-202ENST00000563219 ARHGAP4P98171 946 aa5.82□□□□□ -1.48
SHCBP1-202ENST00000563219 ACAD11Q709F0 780 aa5.82□□□□□ -1.48
SHCBP1-202ENST00000563219 WNT8BQ93098 351 aa5.82□□□□□ -1.48
SHCBP1-202ENST00000563219 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
SHCBP1-202ENST00000563219 CEP41Q9BYV8 373 aa5.82□□□□□ -1.48
SHCBP1-202ENST00000563219 CHRDQ9H2X0 955 aa5.82□□□□□ -1.48
SHCBP1-202ENST00000563219 H3BRJ5 948 aa5.81□□□□□ -1.48
SHCBP1-202ENST00000563219 PDE2AO00408 941 aaPredicted RBP5.81□□□□□ -1.48
SHCBP1-202ENST00000563219 DDX3YO15523 660 aaKnown RBP5.81□□□□□ -1.48
SHCBP1-202ENST00000563219 DUOXA2Q1HG44 320 aa5.81□□□□□ -1.48
SHCBP1-202ENST00000563219 KIAA1211Q6ZU35 1233 aa5.81□□□□□ -1.48
SHCBP1-202ENST00000563219 KLHDC7BQ96G42 594 aa5.81□□□□□ -1.48
SHCBP1-202ENST00000563219 OSGEPQ9NPF4 335 aa5.81□□□□□ -1.48
SHCBP1-202ENST00000563219 SEC31BQ9NQW1 1179 aa5.81□□□□□ -1.48
SHCBP1-202ENST00000563219 STOML1Q9UBI4 398 aa5.81□□□□□ -1.48
SHCBP1-202ENST00000563219 POLIQ9UNA4 740 aa5.81□□□□□ -1.48
SHCBP1-202ENST00000563219 RAXQ9Y2V3 346 aa5.81□□□□□ -1.48
SHCBP1-202ENST00000563219 DHX15O43143 795 aaKnown RBP5.8□□□□□ -1.48
SHCBP1-202ENST00000563219 ACPPP15309 386 aa5.8□□□□□ -1.48
SHCBP1-202ENST00000563219 CABP4P57796 275 aa5.8□□□□□ -1.48
SHCBP1-202ENST00000563219 PIP4K2BP78356 416 aa5.8□□□□□ -1.48
SHCBP1-202ENST00000563219 UVSSAQ2YD98 709 aa5.8□□□□□ -1.48
SHCBP1-202ENST00000563219 ARMC10Q8N2F6 343 aa5.8□□□□□ -1.48
SHCBP1-202ENST00000563219 FOXD4L4Q8WXT5 416 aaPredicted RBP5.8□□□□□ -1.48
SHCBP1-202ENST00000563219 PSMG3-AS1Q96PY0 264 aa5.8□□□□□ -1.48
SHCBP1-202ENST00000563219 FZD6O60353 706 aa5.79□□□□□ -1.48
SHCBP1-202ENST00000563219 ADAM11O75078 769 aa5.79□□□□□ -1.48
SHCBP1-202ENST00000563219 TNFRSF21O75509 655 aa5.79□□□□□ -1.48
SHCBP1-202ENST00000563219 TRPA1O75762 1119 aa5.79□□□□□ -1.48
SHCBP1-202ENST00000563219 USP5P45974 858 aa5.79□□□□□ -1.48
SHCBP1-202ENST00000563219 EHHADHQ08426 723 aa5.79□□□□□ -1.48
SHCBP1-202ENST00000563219 AAMPQ13685 434 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms