RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 FKBP4Q02790 459 aaKnown RBP eCLIP17■□□□□ 0.31
SPG7-206ENST00000562775 UPF1Q92900 1129 aaKnown RBP eCLIP17■□□□□ 0.31
SPG7-206ENST00000562775 KCNJ4P48050 445 aa16.99■□□□□ 0.31
SPG7-206ENST00000562775 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
SPG7-206ENST00000562775 AKAP11Q9UKA4 1901 aa16.99■□□□□ 0.31
SPG7-206ENST00000562775 ALDH1B1P30837 517 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 ZAP70P43403 619 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 BCAMP50895 628 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 NMIQ13287 307 aaPredicted RBP16.98■□□□□ 0.31
SPG7-206ENST00000562775 MASTLQ96GX5 879 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 IL25Q9H293 177 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 ANTXR1Q9H6X2 564 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 LEMD3Q9Y2U8 911 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 ZNF804BA4D1E1 1349 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 XDHP47989 1333 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 RAD50Q92878 1312 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 LRRFIP1Q32MZ4 808 aaKnown RBP16.98■□□□□ 0.31
SPG7-206ENST00000562775 CAVIN4Q5BKX8 364 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 ANO2Q9NQ90 1003 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 HMG20BQ9P0W2 317 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 ANKIB1Q9P2G1 1089 aa16.98■□□□□ 0.31
SPG7-206ENST00000562775 WTIPA6NIX2 430 aaPredicted RBP16.97■□□□□ 0.31
SPG7-206ENST00000562775 TTF1Q15361 905 aaPredicted RBP16.97■□□□□ 0.31
SPG7-206ENST00000562775 PI16Q6UXB8 463 aa16.97■□□□□ 0.31
SPG7-206ENST00000562775 SPATA5Q8NB90 893 aa16.97■□□□□ 0.31
SPG7-206ENST00000562775 FAM227BQ96M60 508 aa16.97■□□□□ 0.31
SPG7-206ENST00000562775 GNL3LQ9NVN8 582 aaKnown RBP16.97■□□□□ 0.31
SPG7-206ENST00000562775 PPEF1O14829 653 aaPredicted RBP16.96■□□□□ 0.31
SPG7-206ENST00000562775 GYG1P46976 350 aa16.96■□□□□ 0.31
SPG7-206ENST00000562775 RASGRF1Q13972 1273 aa16.96■□□□□ 0.31
SPG7-206ENST00000562775 KIAA1211Q6ZU35 1233 aa16.96■□□□□ 0.31
SPG7-206ENST00000562775 FBXO33Q7Z6M2 555 aa16.96■□□□□ 0.31
SPG7-206ENST00000562775 C2CD5Q86YS7 1000 aa16.96■□□□□ 0.31
SPG7-206ENST00000562775 SP8Q8IXZ3 490 aa16.96■□□□□ 0.31
SPG7-206ENST00000562775 DDRGK1Q96HY6 314 aa16.96■□□□□ 0.31
SPG7-206ENST00000562775 FAM84BQ96KN1 310 aaPredicted RBP16.96■□□□□ 0.31
SPG7-206ENST00000562775 COL11A2P13942 1736 aaPredicted RBP16.96■□□□□ 0.31
SPG7-206ENST00000562775 A0A0D9SFI3 127 aa16.95■□□□□ 0.3
SPG7-206ENST00000562775 H0YIN7 160 aa16.95■□□□□ 0.3
SPG7-206ENST00000562775 CYP2E1P05181 493 aaPredicted RBP16.95■□□□□ 0.3
SPG7-206ENST00000562775 ZFYP08048 801 aaPredicted RBP16.95■□□□□ 0.3
SPG7-206ENST00000562775 PODXL2Q9NZ53 605 aa16.95■□□□□ 0.3
SPG7-206ENST00000562775 LRRC37AA6NMS7 1700 aa16.95■□□□□ 0.3
SPG7-206ENST00000562775 ZBTB22O15209 634 aa16.94■□□□□ 0.3
SPG7-206ENST00000562775 RNF113AO15541 343 aaKnown RBP16.94■□□□□ 0.3
SPG7-206ENST00000562775 ATP2B4P23634 1241 aa16.94■□□□□ 0.3
SPG7-206ENST00000562775 GPSM2P81274 684 aa16.94■□□□□ 0.3
SPG7-206ENST00000562775 STYK1Q6J9G0 422 aa16.94■□□□□ 0.3
SPG7-206ENST00000562775 C15orf52Q6ZUT6 534 aaKnown RBP16.94■□□□□ 0.3
SPG7-206ENST00000562775 VPS37DQ86XT2 251 aa16.94■□□□□ 0.3
SPG7-206ENST00000562775 NSFL1CQ9UNZ2 370 aaKnown RBP16.94■□□□□ 0.3
SPG7-206ENST00000562775 ATP6V0A2Q9Y487 856 aa16.94■□□□□ 0.3
SPG7-206ENST00000562775 IRS2Q9Y4H2 1338 aa16.94■□□□□ 0.3
SPG7-206ENST00000562775 SEMA3EO15041 775 aa16.94■□□□□ 0.3
SPG7-206ENST00000562775 KLRK1P26718 216 aa16.94■□□□□ 0.3
SPG7-206ENST00000562775 HIBADHP31937 336 aaKnown RBP16.94■□□□□ 0.3
SPG7-206ENST00000562775 IPO9Q96P70 1041 aaKnown RBP16.94■□□□□ 0.3
SPG7-206ENST00000562775 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.94■□□□□ 0.31e-16■■□□□ 12.4
SPG7-206ENST00000562775 LSG1Q9H089 658 aaKnown RBP16.94■□□□□ 0.3
SPG7-206ENST00000562775 HELLSQ9NRZ9 838 aa16.94■□□□□ 0.3
SPG7-206ENST00000562775 MED23Q9ULK4 1368 aa16.93■□□□□ 0.3
SPG7-206ENST00000562775 MCCP23508 829 aa16.93■□□□□ 0.3
SPG7-206ENST00000562775 MCMDC2Q4G0Z9 681 aa16.93■□□□□ 0.3
SPG7-206ENST00000562775 ZMYM1Q5SVZ6 1142 aa16.93■□□□□ 0.3
SPG7-206ENST00000562775 ZSCAN25Q6NSZ9 544 aa16.93■□□□□ 0.3
SPG7-206ENST00000562775 C10orf71Q711Q0 1435 aa16.93■□□□□ 0.3
SPG7-206ENST00000562775 SLC51AQ86UW1 340 aa16.93■□□□□ 0.3
SPG7-206ENST00000562775 ZNF622Q969S3 477 aaKnown RBP eCLIP16.93■□□□□ 0.32e-6■■■□□ 15.4
SPG7-206ENST00000562775 GGA1Q9UJY5 639 aa16.93■□□□□ 0.3
SPG7-206ENST00000562775 KIF2CQ99661 725 aa16.92■□□□□ 0.3
SPG7-206ENST00000562775 PIH1D3Q9NQM4 214 aaKnown RBP16.92■□□□□ 0.3
SPG7-206ENST00000562775 DENND2AQ9ULE3 1009 aa16.92■□□□□ 0.3
SPG7-206ENST00000562775 PDS5AQ29RF7 1337 aaKnown RBP16.91■□□□□ 0.3
SPG7-206ENST00000562775 CCDC171Q6TFL3 1326 aa16.91■□□□□ 0.3
SPG7-206ENST00000562775 UFL1O94874 794 aa16.91■□□□□ 0.3
SPG7-206ENST00000562775 CHGBP05060 677 aa16.91■□□□□ 0.3
SPG7-206ENST00000562775 TXNRD3Q86VQ6 643 aa16.91■□□□□ 0.3
SPG7-206ENST00000562775 CNKSR1Q969H4 720 aa16.91■□□□□ 0.3
SPG7-206ENST00000562775 MTFR1LQ9H019 292 aa16.91■□□□□ 0.3
SPG7-206ENST00000562775 TMX4Q9H1E5 349 aaPredicted RBP16.91■□□□□ 0.3
SPG7-206ENST00000562775 MYH7P12883 1935 aa16.91■□□□□ 0.3
SPG7-206ENST00000562775 R3HDM1Q15032 1099 aaKnown RBP16.9■□□□□ 0.3
SPG7-206ENST00000562775 ZNF589Q86UQ0 364 aaPredicted RBP16.9■□□□□ 0.3
SPG7-206ENST00000562775 TBC1D16Q8TBP0 767 aa16.9■□□□□ 0.3
SPG7-206ENST00000562775 SEC62Q99442 399 aaKnown RBP16.9■□□□□ 0.3
SPG7-206ENST00000562775 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
SPG7-206ENST00000562775 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
SPG7-206ENST00000562775 IDH1O75874 414 aaKnown RBP16.89■□□□□ 0.3
SPG7-206ENST00000562775 ZBTB7AO95365 584 aa16.89■□□□□ 0.3
SPG7-206ENST00000562775 CHRNA5P30532 468 aa16.89■□□□□ 0.3
SPG7-206ENST00000562775 HSPA4P34932 840 aa16.89■□□□□ 0.3
SPG7-206ENST00000562775 ADD2P35612 726 aa16.89■□□□□ 0.3
SPG7-206ENST00000562775 ANAPC15P60006 121 aa16.89■□□□□ 0.3
SPG7-206ENST00000562775 PTH1RQ03431 593 aa16.89■□□□□ 0.3
SPG7-206ENST00000562775 MAP3K12Q12852 859 aa16.89■□□□□ 0.3
SPG7-206ENST00000562775 APPBP2Q92624 585 aa16.89■□□□□ 0.3
SPG7-206ENST00000562775 MAP4K1Q92918 833 aa16.89■□□□□ 0.3
SPG7-206ENST00000562775 DOCK2Q92608 1830 aa16.89■□□□□ 0.29
SPG7-206ENST00000562775 FRAT2O75474 233 aaPredicted RBP16.89■□□□□ 0.29
SPG7-206ENST00000562775 POLD1P28340 1107 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms