RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 ZNF142P52746 1687 aaPredicted RBP8.91□□□□□ -0.98
CFDP1-202ENST00000562602 NPHP4O75161 1426 aaPredicted RBP8.9□□□□□ -0.98
CFDP1-202ENST00000562602 ELP1O95163 1332 aa8.9□□□□□ -0.98
CFDP1-202ENST00000562602 GOLGA6L6A8MZA4 724 aa8.9□□□□□ -0.98
CFDP1-202ENST00000562602 PTMAP06454 111 aaKnown RBP8.9□□□□□ -0.98
CFDP1-202ENST00000562602 HMGB1P09429 215 aaKnown RBP8.9□□□□□ -0.98
CFDP1-202ENST00000562602 SNRPA1P09661 255 aaKnown RBP8.9□□□□□ -0.98
CFDP1-202ENST00000562602 LRRFIP1Q32MZ4 808 aaKnown RBP8.9□□□□□ -0.98
CFDP1-202ENST00000562602 BLOC1S3Q6QNY0 202 aa8.9□□□□□ -0.98
CFDP1-202ENST00000562602 BLOC1S2Q6QNY1 142 aa8.9□□□□□ -0.98
CFDP1-202ENST00000562602 METTL22Q9BUU2 404 aaPredicted RBP8.9□□□□□ -0.98
CFDP1-202ENST00000562602 COPRSQ9NQ92 184 aa8.9□□□□□ -0.98
CFDP1-202ENST00000562602 LTN1O94822 1766 aa8.9□□□□□ -0.98
CFDP1-202ENST00000562602 KIF1AQ12756 1690 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 CAMTA1Q9Y6Y1 1673 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 ATP5JP18859 108 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 KRT85P78386 507 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 HSP90AA2PQ14568 343 aaPredicted RBP8.89□□□□□ -0.99
CFDP1-202ENST00000562602 CREB3L3Q68CJ9 461 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 PRPF40BQ6NWY9 871 aaKnown RBP8.89□□□□□ -0.99
CFDP1-202ENST00000562602 ZNF790Q6PG37 636 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 KRT28Q7Z3Y7 464 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 IFNL2Q8IZJ0 200 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 DCAF5Q96JK2 942 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 C19orf44Q9H6X5 657 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 SLC52A2Q9HAB3 445 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 LTBP4Q8N2S1 1624 aa8.89□□□□□ -0.99
CFDP1-202ENST00000562602 KCNQ3O43525 872 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 MAP4K4O95819 1239 aaPredicted RBP8.88□□□□□ -0.99
CFDP1-202ENST00000562602 CCDC192P0DO97 292 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 GJB2P29033 226 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 HMGN5P82970 282 aaKnown RBP8.88□□□□□ -0.99
CFDP1-202ENST00000562602 GCKRQ14397 625 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 ATL3Q6DD88 541 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 NOL8Q76FK4 1167 aaKnown RBP8.88□□□□□ -0.99
CFDP1-202ENST00000562602 TTC5Q8N0Z6 440 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 EMID1Q96A84 441 aaPredicted RBP8.88□□□□□ -0.99
CFDP1-202ENST00000562602 FMNL2Q96PY5 1086 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 FSD1Q9BTV5 496 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 GPR108Q9NPR9 543 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 USP25Q9UHP3 1055 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 PCDHB3Q9Y5E6 796 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 RBM8AQ9Y5S9 174 aaKnown RBP8.88□□□□□ -0.99
CFDP1-202ENST00000562602 V9GY48 417 aaPredicted RBP8.88□□□□□ -0.99
CFDP1-202ENST00000562602 MRC1P22897 1456 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 ADAMTS7Q9UKP4 1686 aa8.88□□□□□ -0.99
CFDP1-202ENST00000562602 JCADQ9P266 1359 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 ZBTB7CA1YPR0 619 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 GOLGA6L4A6NEF3 574 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 NEURL1BA8MQ27 555 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 SLC27A2O14975 620 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 ACTN4O43707 911 aaKnown RBP8.87□□□□□ -0.99
CFDP1-202ENST00000562602 RPS6KB1P23443 525 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 HIC1Q14526 733 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 FOXD4L5Q5VV16 416 aaPredicted RBP8.87□□□□□ -0.99
CFDP1-202ENST00000562602 USPL1Q5W0Q7 1092 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 LARP1BQ659C4 914 aaKnown RBP8.87□□□□□ -0.99
CFDP1-202ENST00000562602 RGS22Q8NE09 1264 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 FOXD4L4Q8WXT5 416 aaPredicted RBP8.87□□□□□ -0.99
CFDP1-202ENST00000562602 LRRC59Q96AG4 307 aaKnown RBP8.87□□□□□ -0.99
CFDP1-202ENST00000562602 SUCLG2Q96I99 432 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 LLPHQ9BRT6 129 aaKnown RBP8.87□□□□□ -0.99
CFDP1-202ENST00000562602 PDCL3Q9H2J4 239 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 ZSCAN16Q9H4T2 348 aaPredicted RBP8.87□□□□□ -0.99
CFDP1-202ENST00000562602 BICC1Q9H694 974 aaKnown RBP8.87□□□□□ -0.99
CFDP1-202ENST00000562602 DDX19AQ9NUU7 478 aaKnown RBP8.87□□□□□ -0.99
CFDP1-202ENST00000562602 MTMR6Q9Y217 621 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 DCCP43146 1447 aa8.87□□□□□ -0.99
CFDP1-202ENST00000562602 NPHP3Q7Z494 1330 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 ZNF335Q9H4Z2 1342 aaPredicted RBP8.86□□□□□ -0.99
CFDP1-202ENST00000562602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.86□□□□□ -0.99
CFDP1-202ENST00000562602 DYNC1I1O14576 645 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 GFRA3O60609 400 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 KDM4AO75164 1064 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 SASH1O94885 1247 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 PHKG2P15735 406 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 PTH1RQ03431 593 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 NMIQ13287 307 aaPredicted RBP8.86□□□□□ -0.99
CFDP1-202ENST00000562602 RABL6Q3YEC7 729 aaPredicted RBP8.86□□□□□ -0.99
CFDP1-202ENST00000562602 SASS6Q6UVJ0 657 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 Q6ZNB5 142 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 METTL3Q86U44 580 aaKnown RBP8.86□□□□□ -0.99
CFDP1-202ENST00000562602 PROSER2Q86WR7 435 aaPredicted RBP8.86□□□□□ -0.99
CFDP1-202ENST00000562602 CCDC83Q8IWF9 413 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 UBE2Q2Q8WVN8 375 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 EAF2Q96CJ1 260 aaPredicted RBP8.86□□□□□ -0.99
CFDP1-202ENST00000562602 PRIMPOLQ96LW4 560 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 IL25Q9H293 177 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 ATG3Q9NT62 314 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 CFAP45Q9UL16 551 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 CNPY2Q9Y2B0 182 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 MED23Q9ULK4 1368 aa8.86□□□□□ -0.99
CFDP1-202ENST00000562602 GADD45BO75293 160 aaPredicted RBP8.85□□□□□ -0.99
CFDP1-202ENST00000562602 OATP04181 439 aa8.85□□□□□ -0.99
CFDP1-202ENST00000562602 IGKV5-2P06315 115 aa8.85□□□□□ -0.99
CFDP1-202ENST00000562602 CWF19L2Q2TBE0 894 aaKnown RBP8.85□□□□□ -0.99
CFDP1-202ENST00000562602 PLBD2Q8NHP8 589 aa8.85□□□□□ -0.99
CFDP1-202ENST00000562602 PRR14Q9BWN1 585 aa8.85□□□□□ -0.99
CFDP1-202ENST00000562602 HELLSQ9NRZ9 838 aa8.85□□□□□ -0.99
CFDP1-202ENST00000562602 NSFL1CQ9UNZ2 370 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms