RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 PNMA8AQ86V59 439 aaPredicted RBP20.46■□□□□ 0.87
PKD1-226ENST00000562425 PUS3Q9BZE2 481 aaKnown RBP20.46■□□□□ 0.87
PKD1-226ENST00000562425 ADAMTSL1Q8N6G6 1762 aa20.45■□□□□ 0.86
PKD1-226ENST00000562425 WTIPA6NIX2 430 aaPredicted RBP20.45■□□□□ 0.86
PKD1-226ENST00000562425 TMEM88BA6NKF7 163 aa20.45■□□□□ 0.86
PKD1-226ENST00000562425 RLBP1P12271 317 aa20.45■□□□□ 0.86
PKD1-226ENST00000562425 RFX5P48382 616 aaPredicted RBP20.45■□□□□ 0.86
PKD1-226ENST00000562425 COA1Q9GZY4 146 aa20.45■□□□□ 0.86
PKD1-226ENST00000562425 EYA2O00167 538 aa20.44■□□□□ 0.86
PKD1-226ENST00000562425 PTPN12Q05209 780 aaKnown RBP20.44■□□□□ 0.86
PKD1-226ENST00000562425 MTX1Q13505 466 aa20.44■□□□□ 0.86
PKD1-226ENST00000562425 UBE4AQ14139 1066 aa20.44■□□□□ 0.86
PKD1-226ENST00000562425 LRRC24Q50LG9 513 aa20.44■□□□□ 0.86
PKD1-226ENST00000562425 METTL24Q5JXM2 366 aa20.44■□□□□ 0.86
PKD1-226ENST00000562425 C15orf52Q6ZUT6 534 aaKnown RBP20.44■□□□□ 0.86
PKD1-226ENST00000562425 PANK1Q8TE04 598 aa20.44■□□□□ 0.86
PKD1-226ENST00000562425 ZBTB7BO15156 539 aaPredicted RBP20.43■□□□□ 0.86
PKD1-226ENST00000562425 SRGAP3O43295 1099 aa20.43■□□□□ 0.86
PKD1-226ENST00000562425 ITGBL1O95965 494 aaPredicted RBP20.43■□□□□ 0.86
PKD1-226ENST00000562425 EPHX2P34913 555 aa20.43■□□□□ 0.86
PKD1-226ENST00000562425 KLHDC4Q8TBB5 520 aa20.43■□□□□ 0.86
PKD1-226ENST00000562425 CHMP4BQ9H444 224 aaKnown RBP20.43■□□□□ 0.86
PKD1-226ENST00000562425 PRDM10Q9NQV6 1147 aa20.43■□□□□ 0.86
PKD1-226ENST00000562425 PSMD14O00487 310 aa20.42■□□□□ 0.86
PKD1-226ENST00000562425 CIAO1O76071 339 aa20.42■□□□□ 0.86
PKD1-226ENST00000562425 RPS12P25398 132 aaKnown RBP20.42■□□□□ 0.86
PKD1-226ENST00000562425 GMPSP49915 693 aaPredicted RBP20.42■□□□□ 0.86
PKD1-226ENST00000562425 ZNF804AQ7Z570 1209 aa20.42■□□□□ 0.86
PKD1-226ENST00000562425 USP17L3A6NCW0 530 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 USP17L4A6NCW7 530 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 PDE8BO95263 885 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 SCNN1DP51172 638 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 PDE3AQ14432 1141 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 EAPPQ56P03 285 aaPredicted RBP20.41■□□□□ 0.86
PKD1-226ENST00000562425 USP17L1Q7RTZ2 530 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 TXNRD3Q86VQ6 643 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 DPF2Q92785 391 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 AIDAQ96BJ3 306 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 COPRSQ9NQ92 184 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 GPRC5DQ9NZD1 345 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 DDX19BQ9UMR2 479 aa20.41■□□□□ 0.86
PKD1-226ENST00000562425 SNAP23O00161 211 aa20.4■□□□□ 0.86
PKD1-226ENST00000562425 VIL1P09327 827 aaKnown RBP20.4■□□□□ 0.86
PKD1-226ENST00000562425 SIL1Q9H173 461 aa20.4■□□□□ 0.86
PKD1-226ENST00000562425 KCNQ5Q9NR82 932 aa20.4■□□□□ 0.86
PKD1-226ENST00000562425 H7C1D1 291 aa20.39■□□□□ 0.85
PKD1-226ENST00000562425 FOXN1O15353 648 aa20.39■□□□□ 0.85
PKD1-226ENST00000562425 IL15P40933 162 aaPredicted RBP20.39■□□□□ 0.85
PKD1-226ENST00000562425 EPS15P42566 896 aa20.39■□□□□ 0.85
PKD1-226ENST00000562425 CTCFP49711 727 aaPredicted RBP20.39■□□□□ 0.85
PKD1-226ENST00000562425 MVPQ14764 893 aaKnown RBP20.39■□□□□ 0.85
PKD1-226ENST00000562425 CEP126Q9P2H0 1117 aa20.39■□□□□ 0.85
PKD1-226ENST00000562425 CLEC11AQ9Y240 323 aa20.39■□□□□ 0.85
PKD1-226ENST00000562425 KLRK1P26718 216 aa20.38■□□□□ 0.85
PKD1-226ENST00000562425 VEGFBP49765 207 aa20.38■□□□□ 0.85
PKD1-226ENST00000562425 PUM3Q15397 648 aaKnown RBP20.38■□□□□ 0.85
PKD1-226ENST00000562425 USP50Q70EL3 339 aaPredicted RBP20.38■□□□□ 0.85
PKD1-226ENST00000562425 ATG9AQ7Z3C6 839 aa20.38■□□□□ 0.85
PKD1-226ENST00000562425 AGBL3Q8NEM8 1001 aa20.38■□□□□ 0.85
PKD1-226ENST00000562425 CD209Q9NNX6 404 aa20.38■□□□□ 0.85
PKD1-226ENST00000562425 ADARB2Q9NS39 739 aaKnown RBP20.38■□□□□ 0.85
PKD1-226ENST00000562425 CNOT7Q9UIV1 285 aaKnown RBP20.38■□□□□ 0.85
PKD1-226ENST00000562425 COG6Q9Y2V7 657 aa20.38■□□□□ 0.85
PKD1-226ENST00000562425 IRS2Q9Y4H2 1338 aa20.37■□□□□ 0.85
PKD1-226ENST00000562425 RASSF10A6NK89 507 aa20.37■□□□□ 0.85
PKD1-226ENST00000562425 IFIT1P09914 478 aaKnown RBP20.37■□□□□ 0.85
PKD1-226ENST00000562425 ATP8B2P98198 1209 aa20.37■□□□□ 0.85
PKD1-226ENST00000562425 CAVIN4Q5BKX8 364 aa20.37■□□□□ 0.85
PKD1-226ENST00000562425 STRIP1Q5VSL9 837 aa20.37■□□□□ 0.85
PKD1-226ENST00000562425 RSBN1LQ6PCB5 846 aaPredicted RBP20.37■□□□□ 0.85
PKD1-226ENST00000562425 CNTROBQ8N137 903 aa20.37■□□□□ 0.85
PKD1-226ENST00000562425 VGLL2Q8N8G2 317 aa20.37■□□□□ 0.85
PKD1-226ENST00000562425 PA2G4Q9UQ80 394 aaKnown RBP20.37■□□□□ 0.85
PKD1-226ENST00000562425 ZBTB12Q9Y330 459 aaPredicted RBP20.37■□□□□ 0.85
PKD1-226ENST00000562425 HIBADHP31937 336 aaKnown RBP20.36■□□□□ 0.85
PKD1-226ENST00000562425 TTLL5Q6EMB2 1281 aa20.36■□□□□ 0.85
PKD1-226ENST00000562425 VPS37DQ86XT2 251 aa20.36■□□□□ 0.85
PKD1-226ENST00000562425 FBXW7Q969H0 707 aa20.36■□□□□ 0.85
PKD1-226ENST00000562425 MYO3BQ8WXR4 1341 aa20.35■□□□□ 0.85
PKD1-226ENST00000562425 PNMA6EA0A0J9YXQ4 647 aa20.35■□□□□ 0.85
PKD1-226ENST00000562425 IL1R1P14778 569 aa20.35■□□□□ 0.85
PKD1-226ENST00000562425 G3BP1Q13283 466 aaKnown RBP eCLIP20.35■□□□□ 0.85
PKD1-226ENST00000562425 MICALL2Q8IY33 904 aa20.35■□□□□ 0.85
PKD1-226ENST00000562425 LPIN2Q92539 896 aa20.35■□□□□ 0.85
PKD1-226ENST00000562425 C1orf115Q9H7X2 142 aa20.35■□□□□ 0.85
PKD1-226ENST00000562425 WBP1LQ9NX94 342 aa20.35■□□□□ 0.85
PKD1-226ENST00000562425 SLC5A1P13866 664 aa20.34■□□□□ 0.85
PKD1-226ENST00000562425 GTF2IP78347 998 aa20.34■□□□□ 0.85
PKD1-226ENST00000562425 FAM84BQ96KN1 310 aaPredicted RBP20.34■□□□□ 0.85
PKD1-226ENST00000562425 FGFR2P21802 821 aa20.33■□□□□ 0.85
PKD1-226ENST00000562425 GYG1P46976 350 aa20.33■□□□□ 0.85
PKD1-226ENST00000562425 MMP14P50281 582 aa20.33■□□□□ 0.85
PKD1-226ENST00000562425 POLA2Q14181 598 aa20.33■□□□□ 0.85
PKD1-226ENST00000562425 DEFB115Q30KQ5 88 aa20.33■□□□□ 0.85
PKD1-226ENST00000562425 DACT2Q5SW24 774 aa20.33■□□□□ 0.85
PKD1-226ENST00000562425 MAP1SQ66K74 1059 aaPredicted RBP20.33■□□□□ 0.85
PKD1-226ENST00000562425 SSH3Q8TE77 659 aa20.33■□□□□ 0.85
PKD1-226ENST00000562425 ZNF609O15014 1411 aa20.33■□□□□ 0.84
PKD1-226ENST00000562425 A0A1B0GUL6 1792 aa20.32■□□□□ 0.84
PKD1-226ENST00000562425 SASH1O94885 1247 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms