RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 IGKV5-2P06315 115 aa13.21□□□□□ -0.29
BBS4-205ENST00000562219 KSR2Q6VAB6 950 aa13.21□□□□□ -0.29
BBS4-205ENST00000562219 CTU1Q7Z7A3 348 aaKnown RBP13.21□□□□□ -0.29
BBS4-205ENST00000562219 TTLL11Q8NHH1 800 aa13.21□□□□□ -0.29
BBS4-205ENST00000562219 GREM2Q9H772 168 aa13.21□□□□□ -0.29
BBS4-205ENST00000562219 BSDC1Q9NW68 430 aaPredicted RBP13.21□□□□□ -0.29
BBS4-205ENST00000562219 PI4KAP2A4QPH2 592 aa13.2□□□□□ -0.3
BBS4-205ENST00000562219 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
BBS4-205ENST00000562219 DACT2Q5SW24 774 aa13.2□□□□□ -0.3
BBS4-205ENST00000562219 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
BBS4-205ENST00000562219 PI4KAP1Q8N8J0 262 aa13.2□□□□□ -0.3
BBS4-205ENST00000562219 MINPP1Q9UNW1 487 aa13.2□□□□□ -0.3
BBS4-205ENST00000562219 WTIPA6NIX2 430 aaPredicted RBP13.19□□□□□ -0.3
BBS4-205ENST00000562219 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
BBS4-205ENST00000562219 SOX10P56693 466 aa13.19□□□□□ -0.3
BBS4-205ENST00000562219 CWF19L2Q2TBE0 894 aaKnown RBP13.19□□□□□ -0.3
BBS4-205ENST00000562219 NBPF9Q3BBW0 867 aa13.19□□□□□ -0.3
BBS4-205ENST00000562219 MOB2Q70IA6 237 aa13.19□□□□□ -0.3
BBS4-205ENST00000562219 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
BBS4-205ENST00000562219 STK31Q9BXU1 1019 aa13.19□□□□□ -0.3
BBS4-205ENST00000562219 SCAF8Q9UPN6 1271 aaKnown RBP13.19□□□□□ -0.3
BBS4-205ENST00000562219 NEURL1BA8MQ27 555 aa13.18□□□□□ -0.3
BBS4-205ENST00000562219 WNT10BO00744 389 aa13.18□□□□□ -0.3
BBS4-205ENST00000562219 NF2P35240 595 aa13.18□□□□□ -0.3
BBS4-205ENST00000562219 STRIP1Q5VSL9 837 aa13.18□□□□□ -0.3
BBS4-205ENST00000562219 UBE3BQ7Z3V4 1068 aa13.18□□□□□ -0.3
BBS4-205ENST00000562219 FBXW7Q969H0 707 aa13.18□□□□□ -0.3
BBS4-205ENST00000562219 COA1Q9GZY4 146 aa13.18□□□□□ -0.3
BBS4-205ENST00000562219 COL1A1P02452 1464 aaPredicted RBP13.17□□□□□ -0.3
BBS4-205ENST00000562219 ARAP2Q8WZ64 1704 aa13.17□□□□□ -0.3
BBS4-205ENST00000562219 UBE2Q2LH0YL09 131 aa13.17□□□□□ -0.3
BBS4-205ENST00000562219 IGHMBP2P38935 993 aaKnown RBP13.17□□□□□ -0.3
BBS4-205ENST00000562219 MMP14P50281 582 aa13.17□□□□□ -0.3
BBS4-205ENST00000562219 TTLL12Q14166 644 aaPredicted RBP13.17□□□□□ -0.3
BBS4-205ENST00000562219 PRAMEF18Q5VWM3 479 aa13.17□□□□□ -0.3
BBS4-205ENST00000562219 TSR2Q969E8 191 aaKnown RBP13.17□□□□□ -0.3
BBS4-205ENST00000562219 MXD3Q9BW11 206 aa13.17□□□□□ -0.3
BBS4-205ENST00000562219 LEMD3Q9Y2U8 911 aa13.17□□□□□ -0.3
BBS4-205ENST00000562219 SASH1O94885 1247 aa13.16□□□□□ -0.3
BBS4-205ENST00000562219 PKN2Q16513 984 aaKnown RBP13.16□□□□□ -0.3
BBS4-205ENST00000562219 TXNRD3Q86VQ6 643 aa13.16□□□□□ -0.3
BBS4-205ENST00000562219 OTOFQ9HC10 1997 aa13.16□□□□□ -0.3
BBS4-205ENST00000562219 ZNF804BA4D1E1 1349 aa13.15□□□□□ -0.3
BBS4-205ENST00000562219 H7C1W4 665 aa13.15□□□□□ -0.3
BBS4-205ENST00000562219 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
BBS4-205ENST00000562219 NOM1Q5C9Z4 860 aaKnown RBP13.15□□□□□ -0.3
BBS4-205ENST00000562219 TTLL5Q6EMB2 1281 aa13.15□□□□□ -0.3
BBS4-205ENST00000562219 APOBEC3FQ8IUX4 373 aaKnown RBP13.15□□□□□ -0.3
BBS4-205ENST00000562219 ZNF296Q8WUU4 475 aaPredicted RBP13.15□□□□□ -0.3
BBS4-205ENST00000562219 PLA2G12BQ9BX93 195 aa13.15□□□□□ -0.3
BBS4-205ENST00000562219 ANKRD2Q9GZV1 360 aa13.15□□□□□ -0.3
BBS4-205ENST00000562219 HDAC9Q9UKV0 1011 aa13.15□□□□□ -0.3
BBS4-205ENST00000562219 HPS5Q9UPZ3 1129 aa13.15□□□□□ -0.3
BBS4-205ENST00000562219 RBBP6Q7Z6E9 1792 aaKnown RBP13.15□□□□□ -0.31
BBS4-205ENST00000562219 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
BBS4-205ENST00000562219 ITGA6P23229 1130 aa13.14□□□□□ -0.31
BBS4-205ENST00000562219 KLRK1P26718 216 aa13.14□□□□□ -0.31
BBS4-205ENST00000562219 TM4SF4P48230 202 aa13.14□□□□□ -0.31
BBS4-205ENST00000562219 SREBF2Q12772 1141 aa13.14□□□□□ -0.31
BBS4-205ENST00000562219 GCKRQ14397 625 aa13.14□□□□□ -0.31
BBS4-205ENST00000562219 CCDC27Q2M243 656 aa13.14□□□□□ -0.31
BBS4-205ENST00000562219 G2E3Q7L622 706 aa13.14□□□□□ -0.31
BBS4-205ENST00000562219 KIAA0825Q8IV33 1275 aa13.14□□□□□ -0.31
BBS4-205ENST00000562219 MPHOSPH8Q99549 860 aa13.14□□□□□ -0.31
BBS4-205ENST00000562219 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
BBS4-205ENST00000562219 KCNJ4P48050 445 aa13.13□□□□□ -0.31
BBS4-205ENST00000562219 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
BBS4-205ENST00000562219 ARMC9Q7Z3E5 817 aa13.13□□□□□ -0.31
BBS4-205ENST00000562219 ZBED3Q96IU2 234 aaPredicted RBP13.13□□□□□ -0.31
BBS4-205ENST00000562219 MYH16Q9H6N6 1097 aa13.13□□□□□ -0.31
BBS4-205ENST00000562219 GPR25O00155 361 aa13.12□□□□□ -0.31
BBS4-205ENST00000562219 CASP7P55210 303 aa13.12□□□□□ -0.31
BBS4-205ENST00000562219 GTF2IP78347 998 aa13.12□□□□□ -0.31
BBS4-205ENST00000562219 PTPN12Q05209 780 aaKnown RBP13.12□□□□□ -0.31
BBS4-205ENST00000562219 CHRNDQ07001 517 aa13.12□□□□□ -0.31
BBS4-205ENST00000562219 FLIIQ13045 1269 aa13.12□□□□□ -0.31
BBS4-205ENST00000562219 WWC1Q8IX03 1113 aa13.12□□□□□ -0.31
BBS4-205ENST00000562219 CFHR5Q9BXR6 569 aa13.12□□□□□ -0.31
BBS4-205ENST00000562219 IL16Q14005 1332 aa13.12□□□□□ -0.31
BBS4-205ENST00000562219 SSC5DA1L4H1 1573 aa13.11□□□□□ -0.31
BBS4-205ENST00000562219 CSF1RP07333 972 aa13.11□□□□□ -0.31
BBS4-205ENST00000562219 FKBP5Q13451 457 aaPredicted RBP13.11□□□□□ -0.31
BBS4-205ENST00000562219 LDLRAD1Q5T700 205 aa13.11□□□□□ -0.31
BBS4-205ENST00000562219 LINS1Q8NG48 757 aa13.11□□□□□ -0.31
BBS4-205ENST00000562219 DNAAF4Q8WXU2 420 aa13.11□□□□□ -0.31
BBS4-205ENST00000562219 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
BBS4-205ENST00000562219 ANGEL1Q9UNK9 670 aaKnown RBP13.11□□□□□ -0.31
BBS4-205ENST00000562219 HTTP42858 3142 aa13.11□□□□□ -0.31
BBS4-205ENST00000562219 IRS2Q9Y4H2 1338 aa13.11□□□□□ -0.31
BBS4-205ENST00000562219 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
BBS4-205ENST00000562219 PRKG1Q13976 671 aa13.1□□□□□ -0.31
BBS4-205ENST00000562219 PRPF38BQ5VTL8 546 aaKnown RBP13.1□□□□□ -0.31
BBS4-205ENST00000562219 SPRYD7Q5W111 196 aa13.1□□□□□ -0.31
BBS4-205ENST00000562219 FBXO46Q6PJ61 603 aaPredicted RBP13.1□□□□□ -0.31
BBS4-205ENST00000562219 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
BBS4-205ENST00000562219 CD209Q9NNX6 404 aa13.1□□□□□ -0.31
BBS4-205ENST00000562219 FKTNO75072 461 aa13.09□□□□□ -0.31
BBS4-205ENST00000562219 ALDH1A1P00352 501 aa13.09□□□□□ -0.31
BBS4-205ENST00000562219 DLGAP5Q15398 846 aa13.09□□□□□ -0.31
BBS4-205ENST00000562219 CERS5Q8N5B7 392 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms