RNA–Protein interactions for RNA: ENST00000562100.5

PDPR-204, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, human

TSL 5

Gene PDPR, Length 1,643 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDPR-204	ENST00000562100	RPS6KB1	P23443	525 aa		10.87	□□□□□ -0.67
PDPR-204	ENST00000562100	EN1	Q05925	392 aa	Predicted RBP	10.87	□□□□□ -0.67
PDPR-204	ENST00000562100	PKP1	Q13835	747 aa		10.87	□□□□□ -0.67
PDPR-204	ENST00000562100	METTL24	Q5JXM2	366 aa		10.87	□□□□□ -0.67
PDPR-204	ENST00000562100	MCTP1	Q6DN14	999 aa		10.87	□□□□□ -0.67
PDPR-204	ENST00000562100	LDHAL6A	Q6ZMR3	332 aa		10.87	□□□□□ -0.67
PDPR-204	ENST00000562100	NOL8	Q76FK4	1167 aa	Known RBP	10.87	□□□□□ -0.67
PDPR-204	ENST00000562100	ACSBG1	Q96GR2	724 aa		10.87	□□□□□ -0.67
PDPR-204	ENST00000562100	GREM2	Q9H772	168 aa		10.87	□□□□□ -0.67
PDPR-204	ENST00000562100	CNNM1	Q9NRU3	951 aa		10.87	□□□□□ -0.67
PDPR-204	ENST00000562100	TBC1D2B	Q9UPU7	963 aa		10.87	□□□□□ -0.67
PDPR-204	ENST00000562100	QSER1	Q2KHR3	1735 aa		10.86	□□□□□ -0.67
PDPR-204	ENST00000562100	HMGB1	P09429	215 aa	Known RBP	10.86	□□□□□ -0.67
PDPR-204	ENST00000562100	ITPK1	Q13572	414 aa		10.86	□□□□□ -0.67
PDPR-204	ENST00000562100	UTP14A	Q9BVJ6	771 aa	Known RBP	10.86	□□□□□ -0.67
PDPR-204	ENST00000562100	SMC3	Q9UQE7	1217 aa		10.86	□□□□□ -0.67
PDPR-204	ENST00000562100	CNTNAP4	Q9C0A0	1308 aa		10.86	□□□□□ -0.67
PDPR-204	ENST00000562100	TTF1	Q15361	905 aa	Predicted RBP	10.85	□□□□□ -0.67
PDPR-204	ENST00000562100	EZH2	Q15910	746 aa	Known RBP	10.85	□□□□□ -0.67
PDPR-204	ENST00000562100	ZSCAN25	Q6NSZ9	544 aa		10.85	□□□□□ -0.67
PDPR-204	ENST00000562100	CLEC4G	Q6UXB4	293 aa		10.85	□□□□□ -0.67
PDPR-204	ENST00000562100	VGLL2	Q8N8G2	317 aa		10.85	□□□□□ -0.67
PDPR-204	ENST00000562100	LMBRD1	Q9NUN5	540 aa		10.85	□□□□□ -0.67
PDPR-204	ENST00000562100	DDX49	Q9Y6V7	483 aa	Known RBP	10.85	□□□□□ -0.67
PDPR-204	ENST00000562100	CCDC88A	Q3V6T2	1871 aa		10.85	□□□□□ -0.67
PDPR-204	ENST00000562100	PDE8B	O95263	885 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	MBD3	O95983	291 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	UQCRFS1P1	P0C7P4	283 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	NEK1	Q96PY6	1258 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.84	□□□□□ -0.67	4e-6	■■■□□ 15.9
PDPR-204	ENST00000562100	ATP6V1D	Q9Y5K8	247 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	NDUFB9	Q9Y6M9	179 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	MAST3	O60307	1309 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	TAF1	P21675	1872 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	KIAA1551	Q9HCM1	1747 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	NTSR2	O95665	410 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	ADORA1	P30542	326 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	MRE11	P49959	708 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	PUM3	Q15397	648 aa	Known RBP	10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	CCDC152	Q4G0S7	254 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	SUSD4	Q5VX71	490 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	SYNE4	Q8N205	404 aa		10.84	□□□□□ -0.67
PDPR-204	ENST00000562100	ZSCAN22	P10073	491 aa	Predicted RBP	10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	CPA1	P15085	419 aa		10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	PDC	P20941	246 aa		10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	ARID4A	P29374	1257 aa	Predicted RBP	10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	RC3H1	Q5TC82	1133 aa	Known RBP	10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	CCDC129	Q6ZRS4	1044 aa		10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	PROM2	Q8N271	834 aa		10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	LPIN2	Q92539	896 aa		10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	APPBP2	Q92624	585 aa		10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	CHMP4C	Q96CF2	233 aa		10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	SEC62	Q99442	399 aa	Known RBP	10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	GZF1	Q9H116	711 aa	Predicted RBP	10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	CTNNA3	Q9UI47	895 aa		10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	MAST2	Q6P0Q8	1798 aa		10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	UBR3	Q6ZT12	1888 aa		10.83	□□□□□ -0.68
PDPR-204	ENST00000562100	TIAM2	Q8IVF5	1701 aa		10.82	□□□□□ -0.68
PDPR-204	ENST00000562100	STX6	O43752	255 aa		10.82	□□□□□ -0.68
PDPR-204	ENST00000562100	LARGE1	O95461	756 aa		10.82	□□□□□ -0.68
PDPR-204	ENST00000562100	CYP21A2	P08686	494 aa		10.82	□□□□□ -0.68
PDPR-204	ENST00000562100	SLC5A1	P13866	664 aa		10.82	□□□□□ -0.68
PDPR-204	ENST00000562100	FGFR2	P21802	821 aa		10.82	□□□□□ -0.68
PDPR-204	ENST00000562100	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
PDPR-204	ENST00000562100	ME3	Q16798	604 aa		10.82	□□□□□ -0.68
PDPR-204	ENST00000562100	CCDC83	Q8IWF9	413 aa		10.82	□□□□□ -0.68
PDPR-204	ENST00000562100	TMEM87A	Q8NBN3	555 aa		10.82	□□□□□ -0.68
PDPR-204	ENST00000562100	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
PDPR-204	ENST00000562100	HSPD1	P10809	573 aa	Known RBP	10.81	□□□□□ -0.68
PDPR-204	ENST00000562100	SYT1	P21579	422 aa		10.81	□□□□□ -0.68
PDPR-204	ENST00000562100	GJB2	P29033	226 aa		10.81	□□□□□ -0.68
PDPR-204	ENST00000562100	IGHMBP2	P38935	993 aa	Known RBP	10.81	□□□□□ -0.68
PDPR-204	ENST00000562100	TOB2	Q14106	344 aa	Predicted RBP	10.81	□□□□□ -0.68
PDPR-204	ENST00000562100	CSPP1	Q1MSJ5	1256 aa		10.81	□□□□□ -0.68
PDPR-204	ENST00000562100	TPCN1	Q9ULQ1	816 aa		10.81	□□□□□ -0.68
PDPR-204	ENST00000562100		M0R2C6	588 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	F13A1	P00488	732 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	MCAM	P43121	646 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	ZAP70	P43403	619 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	ZNF445	P59923	1031 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	TXNRD1	Q16881	649 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	DHX32	Q7L7V1	743 aa	Known RBP	10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	LINC00116	Q8NCU8	138 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	CDC5L	Q99459	802 aa	Known RBP	10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	MPHOSPH8	Q99549	860 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	ECM29	Q5VYK3	1845 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	PRPF40A	O75400	957 aa	Known RBP	10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	HCLS1	P14317	486 aa	Predicted RBP	10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	NCL	P19338	710 aa	Known RBP	10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	ST3GAL1	Q11201	340 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	SCARF1	Q14162	830 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	UBE3C	Q15386	1083 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	FBXL16	Q8N461	479 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	OSBP2	Q969R2	916 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	SYAP1	Q96A49	352 aa	Predicted RBP	10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	AGXT2	Q9BYV1	514 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	TAF6L	Q9Y6J9	622 aa		10.8	□□□□□ -0.68
PDPR-204	ENST00000562100	ZMYM6	O95789	1325 aa		10.79	□□□□□ -0.68
PDPR-204	ENST00000562100	WDR19	Q8NEZ3	1342 aa		10.79	□□□□□ -0.68

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