RNA–Protein interactions for RNA: ENST00000561442.5

USP3-221, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-221ENST00000561442 IRS2Q9Y4H2 1338 aa17.78■□□□□ 0.44
USP3-221ENST00000561442 CCDC88AQ3V6T2 1871 aa17.78■□□□□ 0.44
USP3-221ENST00000561442 SURF6O75683 361 aaKnown RBP17.78■□□□□ 0.44
USP3-221ENST00000561442 OS9Q13438 667 aaPredicted RBP17.78■□□□□ 0.44
USP3-221ENST00000561442 PUM3Q15397 648 aaKnown RBP17.78■□□□□ 0.44
USP3-221ENST00000561442 CIAPIN1Q6FI81 312 aa17.78■□□□□ 0.44
USP3-221ENST00000561442 SIRT2Q8IXJ6 389 aa17.78■□□□□ 0.44
USP3-221ENST00000561442 RRAGCQ9HB90 399 aa17.78■□□□□ 0.44
USP3-221ENST00000561442 GYG1P46976 350 aa17.77■□□□□ 0.44
USP3-221ENST00000561442 TFCP2Q12800 502 aa17.77■□□□□ 0.44
USP3-221ENST00000561442 C15orf52Q6ZUT6 534 aaKnown RBP17.77■□□□□ 0.44
USP3-221ENST00000561442 RPAP2Q8IXW5 612 aaPredicted RBP17.77■□□□□ 0.44
USP3-221ENST00000561442 GPC2Q8N158 579 aa17.77■□□□□ 0.44
USP3-221ENST00000561442 FBXW7Q969H0 707 aa17.77■□□□□ 0.44
USP3-221ENST00000561442 COA1Q9GZY4 146 aa17.77■□□□□ 0.44
USP3-221ENST00000561442 PSMD14O00487 310 aa17.76■□□□□ 0.43
USP3-221ENST00000561442 IFIT1P09914 478 aaKnown RBP17.76■□□□□ 0.43
USP3-221ENST00000561442 FGFR2P21802 821 aa17.76■□□□□ 0.43
USP3-221ENST00000561442 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
USP3-221ENST00000561442 ATP2B3Q16720 1220 aa17.76■□□□□ 0.43
USP3-221ENST00000561442 ZNF804AQ7Z570 1209 aa17.76■□□□□ 0.43
USP3-221ENST00000561442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.76■□□□□ 0.43
USP3-221ENST00000561442 DICER1Q9UPY3 1922 aaKnown RBP17.75■□□□□ 0.43
USP3-221ENST00000561442 HMMRO75330 724 aa17.75■□□□□ 0.43
USP3-221ENST00000561442 SLC5A1P13866 664 aa17.75■□□□□ 0.43
USP3-221ENST00000561442 GMPSP49915 693 aaPredicted RBP17.75■□□□□ 0.43
USP3-221ENST00000561442 TNIP1Q15025 636 aa17.75■□□□□ 0.43
USP3-221ENST00000561442 PODNQ7Z5L7 613 aa17.75■□□□□ 0.43
USP3-221ENST00000561442 LPIN2Q92539 896 aa17.75■□□□□ 0.43
USP3-221ENST00000561442 CD209Q9NNX6 404 aa17.75■□□□□ 0.43
USP3-221ENST00000561442 EXOC6BQ9Y2D4 811 aa17.75■□□□□ 0.43
USP3-221ENST00000561442 POTECB2RU33 542 aa17.74■□□□□ 0.43
USP3-221ENST00000561442 SASH1O94885 1247 aa17.74■□□□□ 0.43
USP3-221ENST00000561442 HIBADHP31937 336 aaKnown RBP17.74■□□□□ 0.43
USP3-221ENST00000561442 VPS37DQ86XT2 251 aa17.74■□□□□ 0.43
USP3-221ENST00000561442 EXOC6Q8TAG9 804 aa17.74■□□□□ 0.43
USP3-221ENST00000561442 FAM84BQ96KN1 310 aaPredicted RBP17.74■□□□□ 0.43
USP3-221ENST00000561442 JAG2Q9Y219 1238 aa17.74■□□□□ 0.43
USP3-221ENST00000561442 NOP58Q9Y2X3 529 aaKnown RBP17.74■□□□□ 0.43
USP3-221ENST00000561442 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
USP3-221ENST00000561442 A0A1B0GUL6 1792 aa17.74■□□□□ 0.43
USP3-221ENST00000561442 ADORA1P30542 326 aa17.73■□□□□ 0.43
USP3-221ENST00000561442 BCAMP50895 628 aa17.73■□□□□ 0.43
USP3-221ENST00000561442 FBXO33Q7Z6M2 555 aa17.73■□□□□ 0.43
USP3-221ENST00000561442 L3MBTL3Q96JM7 780 aaPredicted RBP17.73■□□□□ 0.43
USP3-221ENST00000561442 MXD3Q9BW11 206 aa17.73■□□□□ 0.43
USP3-221ENST00000561442 IQSEC3Q9UPP2 1182 aaPredicted RBP17.73■□□□□ 0.43
USP3-221ENST00000561442 PCDHB15Q9Y5E8 787 aa17.73■□□□□ 0.43
USP3-221ENST00000561442 USP17L3A6NCW0 530 aa17.72■□□□□ 0.43
USP3-221ENST00000561442 USP17L4A6NCW7 530 aa17.72■□□□□ 0.43
USP3-221ENST00000561442 APBB1O00213 710 aa17.72■□□□□ 0.43
USP3-221ENST00000561442 KIF3CO14782 793 aa17.72■□□□□ 0.43
USP3-221ENST00000561442 VEGFAP15692 232 aaPredicted RBP17.72■□□□□ 0.43
USP3-221ENST00000561442 SCNN1DP51172 638 aa17.72■□□□□ 0.43
USP3-221ENST00000561442 TIMM10P62072 90 aa17.72■□□□□ 0.43
USP3-221ENST00000561442 GTF2IP78347 998 aa17.72■□□□□ 0.43
USP3-221ENST00000561442 CAVIN4Q5BKX8 364 aa17.72■□□□□ 0.43
USP3-221ENST00000561442 USP17L1Q7RTZ2 530 aa17.72■□□□□ 0.43
USP3-221ENST00000561442 A0A1B0GUL7 405 aa17.71■□□□□ 0.43
USP3-221ENST00000561442 SHTN1A0MZ66 631 aa17.71■□□□□ 0.43
USP3-221ENST00000561442 VIL1P09327 827 aaKnown RBP17.71■□□□□ 0.43
USP3-221ENST00000561442 IL1R1P14778 569 aa17.71■□□□□ 0.43
USP3-221ENST00000561442 LMOD1P29536 600 aaPredicted RBP17.71■□□□□ 0.43
USP3-221ENST00000561442 NEUROD6Q96NK8 337 aa17.71■□□□□ 0.43
USP3-221ENST00000561442 HACL1Q9UJ83 578 aa17.71■□□□□ 0.43
USP3-221ENST00000561442 AKAP2Q9Y2D5 859 aa17.71■□□□□ 0.43
USP3-221ENST00000561442 IQCA1LA6NCM1 817 aa17.7■□□□□ 0.42
USP3-221ENST00000561442 EPS15P42566 896 aa17.7■□□□□ 0.42
USP3-221ENST00000561442 DACT2Q5SW24 774 aa17.7■□□□□ 0.42
USP3-221ENST00000561442 TTLL5Q6EMB2 1281 aa17.7■□□□□ 0.42
USP3-221ENST00000561442 RSBN1LQ6PCB5 846 aaPredicted RBP17.7■□□□□ 0.42
USP3-221ENST00000561442 BCL11AQ9H165 835 aa17.7■□□□□ 0.42
USP3-221ENST00000561442 FRAT2O75474 233 aaPredicted RBP17.69■□□□□ 0.42
USP3-221ENST00000561442 CHAF1AQ13111 956 aaPredicted RBP17.69■□□□□ 0.42
USP3-221ENST00000561442 STRIP1Q5VSL9 837 aa17.69■□□□□ 0.42
USP3-221ENST00000561442 C16orf71Q8IYS4 520 aaPredicted RBP17.69■□□□□ 0.42
USP3-221ENST00000561442 TDRD7Q8NHU6 1098 aaKnown RBP17.69■□□□□ 0.42
USP3-221ENST00000561442 XAGE2Q96GT9 111 aa17.69■□□□□ 0.42
USP3-221ENST00000561442 TAF1DQ9H5J8 278 aaPredicted RBP17.69■□□□□ 0.42
USP3-221ENST00000561442 GPRC5DQ9NZD1 345 aa17.69■□□□□ 0.42
USP3-221ENST00000561442 ZNF609O15014 1411 aa17.69■□□□□ 0.42
USP3-221ENST00000561442 EPHX2P34913 555 aa17.68■□□□□ 0.42
USP3-221ENST00000561442 PHKA1P46020 1223 aa17.68■□□□□ 0.42
USP3-221ENST00000561442 HSP90AB4PQ58FF6 505 aa17.68■□□□□ 0.42
USP3-221ENST00000561442 TNNI3KQ59H18 835 aa17.68■□□□□ 0.42
USP3-221ENST00000561442 ERC1Q8IUD2 1116 aa17.68■□□□□ 0.42
USP3-221ENST00000561442 MICALL2Q8IY33 904 aa17.68■□□□□ 0.42
USP3-221ENST00000561442 WDR90Q96KV7 1748 aa17.68■□□□□ 0.42
USP3-221ENST00000561442 CNOT7Q9UIV1 285 aaKnown RBP17.68■□□□□ 0.42
USP3-221ENST00000561442 FPGT-TNNI3KV9GXZ4 949 aa17.68■□□□□ 0.42
USP3-221ENST00000561442 RPS12P25398 132 aaKnown RBP17.67■□□□□ 0.42
USP3-221ENST00000561442 EAPPQ56P03 285 aaPredicted RBP17.67■□□□□ 0.42
USP3-221ENST00000561442 GORABQ5T7V8 394 aa17.67■□□□□ 0.42
USP3-221ENST00000561442 RHPN1Q8TCX5 695 aa17.67■□□□□ 0.42
USP3-221ENST00000561442 IL1RAPL2Q9NP60 686 aa17.67■□□□□ 0.42
USP3-221ENST00000561442 SCN9AQ15858 1988 aa17.67■□□□□ 0.42
USP3-221ENST00000561442 H7C1D1 291 aa17.66■□□□□ 0.42
USP3-221ENST00000561442 POTEIP0CG38 1075 aa17.66■□□□□ 0.42
USP3-221ENST00000561442 POTEJP0CG39 1038 aa17.66■□□□□ 0.42
USP3-221ENST00000561442 CCDC102BQ68D86 513 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms