RNA–Protein interactions for RNA: ENST00000561405.1

UBE2CP4-201, Transcript of ubiquitin conjugating enzyme E2 C pseudogene 4, humanhuman

BASIC

Gene UBE2CP4, Length 535 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2CP4-201ENST00000561405 ECE2O60344 883 aa9.39□□□□□ -0.91
UBE2CP4-201ENST00000561405 RAD17O75943 681 aa9.39□□□□□ -0.91
UBE2CP4-201ENST00000561405 IGHMBP2P38935 993 aaKnown RBP9.39□□□□□ -0.91
UBE2CP4-201ENST00000561405 GMPSP49915 693 aaPredicted RBP9.39□□□□□ -0.91
UBE2CP4-201ENST00000561405 EPHA10Q5JZY3 1008 aa9.39□□□□□ -0.91
UBE2CP4-201ENST00000561405 ZNF467Q7Z7K2 595 aaPredicted RBP9.39□□□□□ -0.91
UBE2CP4-201ENST00000561405 DPF2Q92785 391 aa9.39□□□□□ -0.91
UBE2CP4-201ENST00000561405 KAZALD1Q96I82 304 aa9.39□□□□□ -0.91
UBE2CP4-201ENST00000561405 GPR101Q96P66 508 aaPredicted RBP9.39□□□□□ -0.91
UBE2CP4-201ENST00000561405 ZC3H12CQ9C0D7 883 aaKnown RBP9.39□□□□□ -0.91
UBE2CP4-201ENST00000561405 ADARB2Q9NS39 739 aaKnown RBP9.39□□□□□ -0.91
UBE2CP4-201ENST00000561405 MED23Q9ULK4 1368 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 ANKRD18BA2A2Z9 1011 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 PSMD14O00487 310 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 RIMBP2O15034 1052 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 VIL1P09327 827 aaKnown RBP9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 RPS12P25398 132 aaKnown RBP9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 CCT4P50991 539 aaKnown RBP9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 HTRA3P83110 453 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 EAPPQ56P03 285 aaPredicted RBP9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 SLC4A10Q6U841 1118 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 JMYQ8N9B5 988 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 KLRG1Q96E93 195 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 DBNDD1Q9H9R9 158 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 KCNQ5Q9NR82 932 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 C9orf78Q9NZ63 289 aaPredicted RBP9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 PGAP2Q9UHJ9 254 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 LEMD3Q9Y2U8 911 aa9.38□□□□□ -0.91
UBE2CP4-201ENST00000561405 A0A1B0GUL6 1792 aa9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 IRS2Q9Y4H2 1338 aa9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 WTIPA6NIX2 430 aaPredicted RBP9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 RIOK3O14730 519 aaKnown RBP9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 NBPF7P0C2Y1 421 aaPredicted RBP9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 HIRAP54198 1017 aaPredicted RBP9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 IFIT5Q13325 482 aaKnown RBP9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 DOK7Q18PE1 504 aa9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 RABL6Q3YEC7 729 aaPredicted RBP9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 MAP1SQ66K74 1059 aaPredicted RBP9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 LMBR1LQ6UX01 489 aa9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 C15orf52Q6ZUT6 534 aaKnown RBP9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 PODNQ7Z5L7 613 aa9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 CNTROBQ8N137 903 aa9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 SUCLG2Q96I99 432 aa9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 MPHOSPH8Q99549 860 aa9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 BCL2L13Q9BXK5 485 aa9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 ANKRD2Q9GZV1 360 aa9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 CNOT7Q9UIV1 285 aaKnown RBP9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 ZNF646O15015 1829 aaPredicted RBP9.37□□□□□ -0.91
UBE2CP4-201ENST00000561405 RARSP54136 660 aaKnown RBP9.36□□□□□ -0.91
UBE2CP4-201ENST00000561405 CHRNDQ07001 517 aa9.36□□□□□ -0.91
UBE2CP4-201ENST00000561405 ZC3H15Q8WU90 426 aaKnown RBP9.36□□□□□ -0.91
UBE2CP4-201ENST00000561405 GMLQ99445 158 aa9.36□□□□□ -0.91
UBE2CP4-201ENST00000561405 USP44Q9H0E7 712 aa9.36□□□□□ -0.91
UBE2CP4-201ENST00000561405 SMC4Q9NTJ3 1288 aa9.36□□□□□ -0.91
UBE2CP4-201ENST00000561405 TRPM7Q96QT4 1865 aa9.36□□□□□ -0.91
UBE2CP4-201ENST00000561405 POLR2AP24928 1970 aaKnown RBP9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 ZNF804BA4D1E1 1349 aa9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 SHTN1A0MZ66 631 aa9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 CCDC57Q2TAC2 916 aa9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 TXNRD3Q86VQ6 643 aa9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 MICALL2Q8IY33 904 aa9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 ANKRD44Q8N8A2 993 aa9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 AGBL3Q8NEM8 1001 aa9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 TRPM4Q8TD43 1214 aa9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 ARHGAP45Q92619 1136 aa9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 COA1Q9GZY4 146 aa9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 BICC1Q9H694 974 aaKnown RBP9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 BMP2KQ9NSY1 1161 aaPredicted RBP9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 NOB1Q9ULX3 412 aaKnown RBP9.35□□□□□ -0.91
UBE2CP4-201ENST00000561405 USP17L3A6NCW0 530 aa9.34□□□□□ -0.91
UBE2CP4-201ENST00000561405 USP17L4A6NCW7 530 aa9.34□□□□□ -0.91
UBE2CP4-201ENST00000561405 TMEM88BA6NKF7 163 aa9.34□□□□□ -0.91
UBE2CP4-201ENST00000561405 H7C1D1 291 aa9.34□□□□□ -0.91
UBE2CP4-201ENST00000561405 KLRK1P26718 216 aa9.34□□□□□ -0.91
UBE2CP4-201ENST00000561405 ZNF280AP59817 542 aaPredicted RBP9.34□□□□□ -0.91
UBE2CP4-201ENST00000561405 RSBN1LQ6PCB5 846 aaPredicted RBP9.34□□□□□ -0.91
UBE2CP4-201ENST00000561405 USP17L1Q7RTZ2 530 aa9.34□□□□□ -0.91
UBE2CP4-201ENST00000561405 API5Q9BZZ5 524 aaKnown RBP9.34□□□□□ -0.91
UBE2CP4-201ENST00000561405 KIF16BQ96L93 1317 aa9.33□□□□□ -0.92
UBE2CP4-201ENST00000561405 G3V3G9 751 aa9.33□□□□□ -0.92
UBE2CP4-201ENST00000561405 EGFRP00533 1210 aa9.33□□□□□ -0.92
UBE2CP4-201ENST00000561405 TIE1P35590 1138 aa9.33□□□□□ -0.92
UBE2CP4-201ENST00000561405 DACT2Q5SW24 774 aa9.33□□□□□ -0.92
UBE2CP4-201ENST00000561405 STRIP1Q5VSL9 837 aa9.33□□□□□ -0.92
UBE2CP4-201ENST00000561405 LDHAL6AQ6ZMR3 332 aa9.33□□□□□ -0.92
UBE2CP4-201ENST00000561405 ZNF594Q96JF6 807 aaPredicted RBP9.33□□□□□ -0.92
UBE2CP4-201ENST00000561405 CHMP3Q9Y3E7 222 aa9.33□□□□□ -0.92
UBE2CP4-201ENST00000561405 RIPOR2Q9Y4F9 1068 aa9.33□□□□□ -0.92
UBE2CP4-201ENST00000561405 CNTNAP1P78357 1384 aa9.33□□□□□ -0.92
UBE2CP4-201ENST00000561405 ZBED9Q6R2W3 1325 aa9.32□□□□□ -0.92
UBE2CP4-201ENST00000561405 PCNTO95613 3336 aa9.32□□□□□ -0.92
UBE2CP4-201ENST00000561405 RASSF10A6NK89 507 aa9.32□□□□□ -0.92
UBE2CP4-201ENST00000561405 TTLL13PA6NNM8 815 aa9.32□□□□□ -0.92
UBE2CP4-201ENST00000561405 SNAP23O00161 211 aa9.32□□□□□ -0.92
UBE2CP4-201ENST00000561405 TAF5LO75529 589 aa9.32□□□□□ -0.92
UBE2CP4-201ENST00000561405 PSEN1P49768 467 aa9.32□□□□□ -0.92
UBE2CP4-201ENST00000561405 MMP14P50281 582 aa9.32□□□□□ -0.92
UBE2CP4-201ENST00000561405 HNRNPUQ00839 825 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBE2CP4-201ENST00000561405 PDAP1Q13442 181 aaKnown RBP9.32□□□□□ -0.92
UBE2CP4-201ENST00000561405 UBE4AQ14139 1066 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms