RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 MTMR3Q13615 1198 aa9.71□□□□□ -0.86
HMBOX1-216ENST00000561377 PRR23CQ6ZRP0 262 aa9.71□□□□□ -0.86
HMBOX1-216ENST00000561377 Q6ZS46 218 aa9.71□□□□□ -0.86
HMBOX1-216ENST00000561377 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.71□□□□□ -0.86
HMBOX1-216ENST00000561377 KLHL23Q8NBE8 558 aa9.71□□□□□ -0.86
HMBOX1-216ENST00000561377 POP1Q99575 1024 aaKnown RBP9.71□□□□□ -0.86
HMBOX1-216ENST00000561377 ADAM19Q9H013 955 aa9.71□□□□□ -0.86
HMBOX1-216ENST00000561377 POLIQ9UNA4 740 aa9.71□□□□□ -0.86
HMBOX1-216ENST00000561377 A6NHS1 94 aa9.7□□□□□ -0.86
HMBOX1-216ENST00000561377 FSCN2O14926 492 aa9.7□□□□□ -0.86
HMBOX1-216ENST00000561377 GLB1P16278 677 aa9.7□□□□□ -0.86
HMBOX1-216ENST00000561377 CDC25BP30305 580 aa9.7□□□□□ -0.86
HMBOX1-216ENST00000561377 CABP4P57796 275 aa9.7□□□□□ -0.86
HMBOX1-216ENST00000561377 EPHA1P21709 976 aa9.69□□□□□ -0.86
HMBOX1-216ENST00000561377 USP5P45974 858 aa9.69□□□□□ -0.86
HMBOX1-216ENST00000561377 EHHADHQ08426 723 aa9.69□□□□□ -0.86
HMBOX1-216ENST00000561377 ARTNQ5T4W7 220 aa9.69□□□□□ -0.86
HMBOX1-216ENST00000561377 ADAMTSL4Q6UY14 1074 aa9.69□□□□□ -0.86
HMBOX1-216ENST00000561377 AGGF1Q8N302 714 aaeCLIP9.69□□□□□ -0.86
HMBOX1-216ENST00000561377 ZFP64Q9NPA5 681 aa9.69□□□□□ -0.86
HMBOX1-216ENST00000561377 SH2B1Q9NRF2 756 aaPredicted RBP9.69□□□□□ -0.86
HMBOX1-216ENST00000561377 ACAD11Q709F0 780 aa9.68□□□□□ -0.86
HMBOX1-216ENST00000561377 WNT8BQ93098 351 aa9.68□□□□□ -0.86
HMBOX1-216ENST00000561377 CARD10Q9BWT7 1032 aa9.68□□□□□ -0.86
HMBOX1-216ENST00000561377 SEC31BQ9NQW1 1179 aa9.68□□□□□ -0.86
HMBOX1-216ENST00000561377 DZANK1Q9NVP4 752 aa9.68□□□□□ -0.86
HMBOX1-216ENST00000561377 USTQ9Y2C2 406 aa9.68□□□□□ -0.86
HMBOX1-216ENST00000561377 H3BRJ5 948 aa9.67□□□□□ -0.86
HMBOX1-216ENST00000561377 FKBP4Q02790 459 aaKnown RBP eCLIP9.67□□□□□ -0.86
HMBOX1-216ENST00000561377 B4GALNT3Q6L9W6 998 aa9.67□□□□□ -0.86
HMBOX1-216ENST00000561377 PHLDB3Q6NSJ2 640 aa9.67□□□□□ -0.86
HMBOX1-216ENST00000561377 SNX29Q8TEQ0 813 aa9.67□□□□□ -0.86
HMBOX1-216ENST00000561377 CEP41Q9BYV8 373 aa9.67□□□□□ -0.86
HMBOX1-216ENST00000561377 CHRDQ9H2X0 955 aa9.67□□□□□ -0.86
HMBOX1-216ENST00000561377 PDE2AO00408 941 aaPredicted RBP9.66□□□□□ -0.86
HMBOX1-216ENST00000561377 PHACTR2O75167 634 aa9.66□□□□□ -0.86
HMBOX1-216ENST00000561377 ABL1P00519 1130 aa9.66□□□□□ -0.86
HMBOX1-216ENST00000561377 ACPPP15309 386 aa9.66□□□□□ -0.86
HMBOX1-216ENST00000561377 PIP4K2BP78356 416 aa9.66□□□□□ -0.86
HMBOX1-216ENST00000561377 LRP8Q14114 963 aa9.66□□□□□ -0.86
HMBOX1-216ENST00000561377 DUOXA2Q1HG44 320 aa9.66□□□□□ -0.86
HMBOX1-216ENST00000561377 SLC51AQ86UW1 340 aa9.66□□□□□ -0.86
HMBOX1-216ENST00000561377 OSGEPQ9NPF4 335 aa9.66□□□□□ -0.86
HMBOX1-216ENST00000561377 KCNK4Q9NYG8 393 aa9.66□□□□□ -0.86
HMBOX1-216ENST00000561377 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.66□□□□□ -0.86
HMBOX1-216ENST00000561377 CARNS1A5YM72 827 aa9.65□□□□□ -0.86
HMBOX1-216ENST00000561377 NFKBIEO00221 500 aa9.65□□□□□ -0.86
HMBOX1-216ENST00000561377 TNFRSF21O75509 655 aa9.65□□□□□ -0.86
HMBOX1-216ENST00000561377 WISP1O95388 367 aa9.65□□□□□ -0.86
HMBOX1-216ENST00000561377 EDN3P14138 238 aa9.65□□□□□ -0.86
HMBOX1-216ENST00000561377 TMEM102Q8N9M5 508 aaPredicted RBP9.65□□□□□ -0.86
HMBOX1-216ENST00000561377 TM4SF5O14894 197 aa9.64□□□□□ -0.87
HMBOX1-216ENST00000561377 KLHDC7BQ96G42 594 aa9.64□□□□□ -0.87
HMBOX1-216ENST00000561377 RNF112Q9ULX5 631 aa9.64□□□□□ -0.87
HMBOX1-216ENST00000561377 EREGO14944 169 aa9.63□□□□□ -0.87
HMBOX1-216ENST00000561377 FZD6O60353 706 aa9.63□□□□□ -0.87
HMBOX1-216ENST00000561377 ARL4DP49703 201 aa9.63□□□□□ -0.87
HMBOX1-216ENST00000561377 UVSSAQ2YD98 709 aa9.63□□□□□ -0.87
HMBOX1-216ENST00000561377 UBL7Q96S82 380 aaPredicted RBP9.63□□□□□ -0.87
HMBOX1-216ENST00000561377 OSMRQ99650 979 aa9.63□□□□□ -0.87
HMBOX1-216ENST00000561377 RAXQ9Y2V3 346 aa9.63□□□□□ -0.87
HMBOX1-216ENST00000561377 DHX15O43143 795 aaKnown RBP9.62□□□□□ -0.87
HMBOX1-216ENST00000561377 TRPA1O75762 1119 aa9.62□□□□□ -0.87
HMBOX1-216ENST00000561377 FSTP19883 344 aa9.62□□□□□ -0.87
HMBOX1-216ENST00000561377 ZNF211Q13398 564 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-216ENST00000561377 KIAA1211Q6ZU35 1233 aa9.62□□□□□ -0.87
HMBOX1-216ENST00000561377 NBPF11Q86T75 865 aa9.62□□□□□ -0.87
HMBOX1-216ENST00000561377 FOXD4L4Q8WXT5 416 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-216ENST00000561377 ANO2Q9NQ90 1003 aa9.62□□□□□ -0.87
HMBOX1-216ENST00000561377 EGFL7Q9UHF1 273 aa9.62□□□□□ -0.87
HMBOX1-216ENST00000561377 SOX13Q9UN79 622 aa9.62□□□□□ -0.87
HMBOX1-216ENST00000561377 GSC2O15499 205 aa9.61□□□□□ -0.87
HMBOX1-216ENST00000561377 DDX3YO15523 660 aaKnown RBP9.61□□□□□ -0.87
HMBOX1-216ENST00000561377 ADAM11O75078 769 aa9.61□□□□□ -0.87
HMBOX1-216ENST00000561377 NXPE3Q969Y0 559 aa9.61□□□□□ -0.87
HMBOX1-216ENST00000561377 HHIPQ96QV1 700 aa9.61□□□□□ -0.87
HMBOX1-216ENST00000561377 FOXD3Q9UJU5 478 aaPredicted RBP9.61□□□□□ -0.87
HMBOX1-216ENST00000561377 AMOTL2Q9Y2J4 779 aa9.61□□□□□ -0.87
HMBOX1-216ENST00000561377 GJD3Q8N144 294 aa9.6□□□□□ -0.87
HMBOX1-216ENST00000561377 UBASH3BQ8TF42 649 aa9.6□□□□□ -0.87
HMBOX1-216ENST00000561377 SLC7A3Q8WY07 619 aa9.6□□□□□ -0.87
HMBOX1-216ENST00000561377 BSNDQ8WZ55 320 aa9.6□□□□□ -0.87
HMBOX1-216ENST00000561377 ZKSCAN3Q9BRR0 538 aa9.6□□□□□ -0.87
HMBOX1-216ENST00000561377 CCDC87Q9NVE4 849 aa9.6□□□□□ -0.87
HMBOX1-216ENST00000561377 HYAL3O43820 417 aaPredicted RBP9.59□□□□□ -0.87
HMBOX1-216ENST00000561377 C19orf57Q0VDD7 668 aa9.59□□□□□ -0.87
HMBOX1-216ENST00000561377 UTP4Q969X6 686 aaKnown RBP9.59□□□□□ -0.87
HMBOX1-216ENST00000561377 STOML1Q9UBI4 398 aa9.59□□□□□ -0.87
HMBOX1-216ENST00000561377 ICMTO60725 284 aa9.58□□□□□ -0.88
HMBOX1-216ENST00000561377 NLRP12P59046 1061 aa9.58□□□□□ -0.88
HMBOX1-216ENST00000561377 ERICH6Q7L0X2 663 aa9.58□□□□□ -0.88
HMBOX1-216ENST00000561377 ARMC10Q8N2F6 343 aa9.58□□□□□ -0.88
HMBOX1-216ENST00000561377 FAM46AQ96IP4 442 aaKnown RBP9.58□□□□□ -0.88
HMBOX1-216ENST00000561377 RNF208Q9H0X6 261 aa9.58□□□□□ -0.88
HMBOX1-216ENST00000561377 SART1O43290 800 aaKnown RBP9.57□□□□□ -0.88
HMBOX1-216ENST00000561377 IKBKEQ14164 716 aa9.57□□□□□ -0.88
HMBOX1-216ENST00000561377 ANKRD34AQ69YU3 496 aa9.57□□□□□ -0.88
HMBOX1-216ENST00000561377 RUSC1Q9BVN2 902 aa9.57□□□□□ -0.88
HMBOX1-216ENST00000561377 BHLHE41Q9C0J9 482 aaPredicted RBP9.57□□□□□ -0.88
HMBOX1-216ENST00000561377 ZFYVE28Q9HCC9 887 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms