RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 PRELPP51888 382 aa12.71□□□□□ -0.37
LRRC28-221ENST00000561276 HDAC1Q13547 482 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-221ENST00000561276 UBE4AQ14139 1066 aa12.71□□□□□ -0.37
LRRC28-221ENST00000561276 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
LRRC28-221ENST00000561276 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-221ENST00000561276 EYA3Q99504 573 aa12.71□□□□□ -0.37
LRRC28-221ENST00000561276 ZC3H12CQ9C0D7 883 aaKnown RBP12.71□□□□□ -0.37
LRRC28-221ENST00000561276 VPS33BQ9H267 617 aa12.71□□□□□ -0.37
LRRC28-221ENST00000561276 RAB11FIP3O75154 756 aa12.7□□□□□ -0.38
LRRC28-221ENST00000561276 LMNB1P20700 586 aa12.7□□□□□ -0.38
LRRC28-221ENST00000561276 IARSP41252 1262 aaKnown RBP12.7□□□□□ -0.38
LRRC28-221ENST00000561276 TIMM10P62072 90 aa12.7□□□□□ -0.38
LRRC28-221ENST00000561276 TXNRD3Q86VQ6 643 aa12.7□□□□□ -0.38
LRRC28-221ENST00000561276 AKAP2Q9Y2D5 859 aa12.7□□□□□ -0.38
LRRC28-221ENST00000561276 PPIP5K2O43314 1243 aa12.69□□□□□ -0.38
LRRC28-221ENST00000561276 FGFR2P21802 821 aa12.69□□□□□ -0.38
LRRC28-221ENST00000561276 KIAA2012Q0VF49 1180 aa12.69□□□□□ -0.38
LRRC28-221ENST00000561276 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
LRRC28-221ENST00000561276 AOC3Q16853 763 aa12.69□□□□□ -0.38
LRRC28-221ENST00000561276 ERC1Q8IUD2 1116 aa12.69□□□□□ -0.38
LRRC28-221ENST00000561276 RHPN1Q8TCX5 695 aa12.69□□□□□ -0.38
LRRC28-221ENST00000561276 NEUROD6Q96NK8 337 aa12.69□□□□□ -0.38
LRRC28-221ENST00000561276 A0A1B0GUL7 405 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 G3V3G9 751 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 KLRK1P26718 216 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 ATP2B3Q16720 1220 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 DCAF8Q5TAQ9 597 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 C15orf52Q6ZUT6 534 aaKnown RBP12.68□□□□□ -0.38
LRRC28-221ENST00000561276 LARGE2Q8N3Y3 721 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 JDP2Q8WYK2 163 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 LPIN2Q92539 896 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 KIF1BPQ96EK5 621 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 BCL11AQ9H165 835 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 MED23Q9ULK4 1368 aa12.68□□□□□ -0.38
LRRC28-221ENST00000561276 IFIT1P09914 478 aaKnown RBP12.67□□□□□ -0.38
LRRC28-221ENST00000561276 SLC5A1P13866 664 aa12.67□□□□□ -0.38
LRRC28-221ENST00000561276 GYG1P46976 350 aa12.67□□□□□ -0.38
LRRC28-221ENST00000561276 DOK7Q18PE1 504 aa12.67□□□□□ -0.38
LRRC28-221ENST00000561276 C9orf131Q5VYM1 1079 aa12.67□□□□□ -0.38
LRRC28-221ENST00000561276 ERICH6BQ5W0A0 696 aa12.67□□□□□ -0.38
LRRC28-221ENST00000561276 FAM84BQ96KN1 310 aaPredicted RBP12.67□□□□□ -0.38
LRRC28-221ENST00000561276 LRRCC1Q9C099 1032 aa12.67□□□□□ -0.38
LRRC28-221ENST00000561276 IL1RAPL2Q9NP60 686 aa12.67□□□□□ -0.38
LRRC28-221ENST00000561276 GPR108Q9NPR9 543 aa12.67□□□□□ -0.38
LRRC28-221ENST00000561276 RNF181Q9P0P0 153 aa12.67□□□□□ -0.38
LRRC28-221ENST00000561276 IRS2Q9Y4H2 1338 aa12.66□□□□□ -0.38
LRRC28-221ENST00000561276 ARAP2Q8WZ64 1704 aa12.66□□□□□ -0.38
LRRC28-221ENST00000561276 SMARCA5O60264 1052 aaPredicted RBP12.66□□□□□ -0.38
LRRC28-221ENST00000561276 TNNI3KQ59H18 835 aa12.66□□□□□ -0.38
LRRC28-221ENST00000561276 CAVIN4Q5BKX8 364 aa12.66□□□□□ -0.38
LRRC28-221ENST00000561276 CLASRPQ8N2M8 674 aaKnown RBP12.66□□□□□ -0.38
LRRC28-221ENST00000561276 EAF2Q96CJ1 260 aaPredicted RBP12.66□□□□□ -0.38
LRRC28-221ENST00000561276 XAGE2Q96GT9 111 aa12.66□□□□□ -0.38
LRRC28-221ENST00000561276 DBNDD1Q9H9R9 158 aa12.66□□□□□ -0.38
LRRC28-221ENST00000561276 FPGT-TNNI3KV9GXZ4 949 aa12.66□□□□□ -0.38
LRRC28-221ENST00000561276 COL4A5P29400 1685 aa12.66□□□□□ -0.38
LRRC28-221ENST00000561276 TIAM2Q8IVF5 1701 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 MYH13Q9UKX3 1938 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 HIBADHP31937 336 aaKnown RBP12.65□□□□□ -0.38
LRRC28-221ENST00000561276 BCAMP50895 628 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 ANKRD45Q5TZF3 282 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 B4GALNT3Q6L9W6 998 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 ZNF804AQ7Z570 1209 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 FBXO33Q7Z6M2 555 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 VPS37DQ86XT2 251 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 SMC5Q8IY18 1101 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 NIM1KQ8IY84 436 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 COA1Q9GZY4 146 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 CCDC8Q9H0W5 538 aaPredicted RBP12.65□□□□□ -0.38
LRRC28-221ENST00000561276 CD209Q9NNX6 404 aa12.65□□□□□ -0.38
LRRC28-221ENST00000561276 ECE2O60344 883 aa12.64□□□□□ -0.39
LRRC28-221ENST00000561276 ADORA1P30542 326 aa12.64□□□□□ -0.39
LRRC28-221ENST00000561276 GORABQ5T7V8 394 aa12.64□□□□□ -0.39
LRRC28-221ENST00000561276 PODNQ7Z5L7 613 aa12.64□□□□□ -0.39
LRRC28-221ENST00000561276 AACSQ86V21 672 aa12.64□□□□□ -0.39
LRRC28-221ENST00000561276 CCDC136Q96JN2 1154 aa12.64□□□□□ -0.39
LRRC28-221ENST00000561276 KCNQ5Q9NR82 932 aa12.64□□□□□ -0.39
LRRC28-221ENST00000561276 ZNRF3Q9ULT6 936 aa12.64□□□□□ -0.39
LRRC28-221ENST00000561276 SCN9AQ15858 1988 aa12.63□□□□□ -0.39
LRRC28-221ENST00000561276 ZNF609O15014 1411 aa12.63□□□□□ -0.39
LRRC28-221ENST00000561276 PSME4Q14997 1843 aa12.63□□□□□ -0.39
LRRC28-221ENST00000561276 YDJCA8MPS7 323 aa12.63□□□□□ -0.39
LRRC28-221ENST00000561276 FZD9O00144 591 aa12.63□□□□□ -0.39
LRRC28-221ENST00000561276 IFIT2P09913 472 aaKnown RBP12.63□□□□□ -0.39
LRRC28-221ENST00000561276 IL1R1P14778 569 aa12.63□□□□□ -0.39
LRRC28-221ENST00000561276 CCDC102BQ68D86 513 aa12.63□□□□□ -0.39
LRRC28-221ENST00000561276 TDRD7Q8NHU6 1098 aaKnown RBP12.63□□□□□ -0.39
LRRC28-221ENST00000561276 DBNDD2Q9BQY9 259 aa12.63□□□□□ -0.39
LRRC28-221ENST00000561276 PPP4R2Q9NY27 417 aa12.63□□□□□ -0.39
LRRC28-221ENST00000561276 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
LRRC28-221ENST00000561276 FRAT2O75474 233 aaPredicted RBP12.62□□□□□ -0.39
LRRC28-221ENST00000561276 PHKA1P46020 1223 aa12.62□□□□□ -0.39
LRRC28-221ENST00000561276 EIF6P56537 245 aaKnown RBP12.62□□□□□ -0.39
LRRC28-221ENST00000561276 CXCL9Q07325 125 aa12.62□□□□□ -0.39
LRRC28-221ENST00000561276 C16orf71Q8IYS4 520 aaPredicted RBP12.62□□□□□ -0.39
LRRC28-221ENST00000561276 TLR7Q9NYK1 1049 aaKnown RBP12.62□□□□□ -0.39
LRRC28-221ENST00000561276 DBNLQ9UJU6 430 aaKnown RBP12.62□□□□□ -0.39
LRRC28-221ENST00000561276 IQSEC3Q9UPP2 1182 aaPredicted RBP12.62□□□□□ -0.39
LRRC28-221ENST00000561276 ZNF646O15015 1829 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms