RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 KIF1BPQ96EK5 621 aa13.16□□□□□ -0.3
TPM1-229ENST00000561242 ANKRD36CQ5JPF3 1778 aa13.16□□□□□ -0.3
TPM1-229ENST00000561242 RPS12P25398 132 aaKnown RBP13.15□□□□□ -0.3
TPM1-229ENST00000561242 TFCP2Q12800 502 aa13.15□□□□□ -0.3
TPM1-229ENST00000561242 TBC1D22AQ8WUA7 517 aa13.15□□□□□ -0.3
TPM1-229ENST00000561242 RRAGCQ9HB90 399 aa13.15□□□□□ -0.3
TPM1-229ENST00000561242 HACL1Q9UJ83 578 aa13.15□□□□□ -0.3
TPM1-229ENST00000561242 MED23Q9ULK4 1368 aa13.15□□□□□ -0.3
TPM1-229ENST00000561242 MYO3BQ8WXR4 1341 aa13.14□□□□□ -0.31
TPM1-229ENST00000561242 FZD9O00144 591 aa13.14□□□□□ -0.31
TPM1-229ENST00000561242 DDNO94850 711 aaPredicted RBP13.14□□□□□ -0.31
TPM1-229ENST00000561242 UQCRFS1P1P0C7P4 283 aa13.14□□□□□ -0.31
TPM1-229ENST00000561242 RFX5P48382 616 aaPredicted RBP13.14□□□□□ -0.31
TPM1-229ENST00000561242 MMP14P50281 582 aa13.14□□□□□ -0.31
TPM1-229ENST00000561242 RBM5P52756 815 aaKnown RBP eCLIP13.14□□□□□ -0.31
TPM1-229ENST00000561242 GTF2IP78347 998 aa13.14□□□□□ -0.31
TPM1-229ENST00000561242 CHAF1AQ13111 956 aaPredicted RBP13.14□□□□□ -0.31
TPM1-229ENST00000561242 POLA2Q14181 598 aa13.14□□□□□ -0.31
TPM1-229ENST00000561242 EAPPQ56P03 285 aaPredicted RBP13.14□□□□□ -0.31
TPM1-229ENST00000561242 PNMA8AQ86V59 439 aaPredicted RBP13.14□□□□□ -0.31
TPM1-229ENST00000561242 ZGPATQ8N5A5 531 aaKnown RBP13.14□□□□□ -0.31
TPM1-229ENST00000561242 GPR101Q96P66 508 aaPredicted RBP13.14□□□□□ -0.31
TPM1-229ENST00000561242 LRRCC1Q9C099 1032 aa13.14□□□□□ -0.31
TPM1-229ENST00000561242 CD209Q9NNX6 404 aa13.14□□□□□ -0.31
TPM1-229ENST00000561242 EXOC6BQ9Y2D4 811 aa13.14□□□□□ -0.31
TPM1-229ENST00000561242 N4BP2Q86UW6 1770 aaPredicted RBP13.14□□□□□ -0.31
TPM1-229ENST00000561242 IRX6P78412 446 aaPredicted RBP13.13□□□□□ -0.31
TPM1-229ENST00000561242 STRIP1Q5VSL9 837 aa13.13□□□□□ -0.31
TPM1-229ENST00000561242 SPTY2D1Q68D10 685 aaPredicted RBP13.13□□□□□ -0.31
TPM1-229ENST00000561242 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
TPM1-229ENST00000561242 SLF2Q8IX21 1173 aa13.13□□□□□ -0.31
TPM1-229ENST00000561242 DENND2AQ9ULE3 1009 aa13.13□□□□□ -0.31
TPM1-229ENST00000561242 A0A1B0GUL7 405 aa13.12□□□□□ -0.31
TPM1-229ENST00000561242 MYO1BO43795 1136 aa13.12□□□□□ -0.31
TPM1-229ENST00000561242 SASH1O94885 1247 aa13.12□□□□□ -0.31
TPM1-229ENST00000561242 GYG1P46976 350 aa13.12□□□□□ -0.31
TPM1-229ENST00000561242 TIMM10P62072 90 aa13.12□□□□□ -0.31
TPM1-229ENST00000561242 CXCL9Q07325 125 aa13.12□□□□□ -0.31
TPM1-229ENST00000561242 AACSQ86V21 672 aa13.12□□□□□ -0.31
TPM1-229ENST00000561242 AGBL3Q8NEM8 1001 aa13.12□□□□□ -0.31
TPM1-229ENST00000561242 WDR66Q8TBY9 1149 aa13.12□□□□□ -0.31
TPM1-229ENST00000561242 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
TPM1-229ENST00000561242 NOL10Q9BSC4 688 aaKnown RBP13.12□□□□□ -0.31
TPM1-229ENST00000561242 GPR108Q9NPR9 543 aa13.12□□□□□ -0.31
TPM1-229ENST00000561242 NOP58Q9Y2X3 529 aaKnown RBP13.12□□□□□ -0.31
TPM1-229ENST00000561242 KIF13BQ9NQT8 1826 aa13.11□□□□□ -0.31
TPM1-229ENST00000561242 SEMA3EO15041 775 aa13.11□□□□□ -0.31
TPM1-229ENST00000561242 BCAMP50895 628 aa13.11□□□□□ -0.31
TPM1-229ENST00000561242 RBM26Q5T8P6 1007 aaKnown RBP13.11□□□□□ -0.31
TPM1-229ENST00000561242 ATG9AQ7Z3C6 839 aa13.11□□□□□ -0.31
TPM1-229ENST00000561242 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
TPM1-229ENST00000561242 RHPN1Q8TCX5 695 aa13.11□□□□□ -0.31
TPM1-229ENST00000561242 CNOT7Q9UIV1 285 aaKnown RBP13.11□□□□□ -0.31
TPM1-229ENST00000561242 PSMD14O00487 310 aa13.1□□□□□ -0.31
TPM1-229ENST00000561242 USP17L8P0C7I0 530 aa13.1□□□□□ -0.31
TPM1-229ENST00000561242 GMPSP49915 693 aaPredicted RBP13.1□□□□□ -0.31
TPM1-229ENST00000561242 TNNI3KQ59H18 835 aa13.1□□□□□ -0.31
TPM1-229ENST00000561242 ANKRD45Q5TZF3 282 aa13.1□□□□□ -0.31
TPM1-229ENST00000561242 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
TPM1-229ENST00000561242 ZNF784Q8NCA9 323 aaPredicted RBP13.1□□□□□ -0.31
TPM1-229ENST00000561242 DPF2Q92785 391 aa13.1□□□□□ -0.31
TPM1-229ENST00000561242 XAGE2Q96GT9 111 aa13.1□□□□□ -0.31
TPM1-229ENST00000561242 FAM84BQ96KN1 310 aaPredicted RBP13.1□□□□□ -0.31
TPM1-229ENST00000561242 FPGT-TNNI3KV9GXZ4 949 aa13.1□□□□□ -0.31
TPM1-229ENST00000561242 MAST3O60307 1309 aa13.1□□□□□ -0.31
TPM1-229ENST00000561242 TNRC6CQ9HCJ0 1690 aaKnown RBP13.09□□□□□ -0.31
TPM1-229ENST00000561242 EPHX2P34913 555 aa13.09□□□□□ -0.31
TPM1-229ENST00000561242 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
TPM1-229ENST00000561242 MFSD14BQ5SR56 506 aa13.09□□□□□ -0.31
TPM1-229ENST00000561242 DCPSQ96C86 337 aaKnown RBP13.09□□□□□ -0.31
TPM1-229ENST00000561242 IL1RAPL2Q9NP60 686 aa13.09□□□□□ -0.31
TPM1-229ENST00000561242 ADARB2Q9NS39 739 aaKnown RBP13.09□□□□□ -0.31
TPM1-229ENST00000561242 TMOD2Q9NZR1 351 aa13.09□□□□□ -0.31
TPM1-229ENST00000561242 LRP2BPQ9P2M1 347 aa13.09□□□□□ -0.31
TPM1-229ENST00000561242 IQSEC3Q9UPP2 1182 aaPredicted RBP13.09□□□□□ -0.31
TPM1-229ENST00000561242 F8W031 263 aaPredicted RBP13.08□□□□□ -0.32
TPM1-229ENST00000561242 SNAP23O00161 211 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 ERC2O15083 957 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 VIL1P09327 827 aaKnown RBP13.08□□□□□ -0.32
TPM1-229ENST00000561242 IL1R1P14778 569 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 GSTO1P78417 241 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 DLGAP5Q15398 846 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 CCDC102BQ68D86 513 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 USP50Q70EL3 339 aaPredicted RBP13.08□□□□□ -0.32
TPM1-229ENST00000561242 FBXO33Q7Z6M2 555 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 DZIP1Q86YF9 867 aaKnown RBP13.08□□□□□ -0.32
TPM1-229ENST00000561242 MICALL2Q8IY33 904 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.32
TPM1-229ENST00000561242 ABCF2Q9UG63 623 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 SLX4Q8IY92 1834 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 ZNF541Q9H0D2 1346 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
TPM1-229ENST00000561242 LDHBP07195 334 aaKnown RBP13.07□□□□□ -0.32
TPM1-229ENST00000561242 LDHCP07864 332 aa13.07□□□□□ -0.32
TPM1-229ENST00000561242 FKBP1AP62942 108 aaKnown RBP13.07□□□□□ -0.32
TPM1-229ENST00000561242 TTF1Q15361 905 aaPredicted RBP13.07□□□□□ -0.32
TPM1-229ENST00000561242 ERICH6Q7L0X2 663 aa13.07□□□□□ -0.32
TPM1-229ENST00000561242 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
TPM1-229ENST00000561242 SMC1BQ8NDV3 1235 aa13.07□□□□□ -0.32
TPM1-229ENST00000561242 TDRD7Q8NHU6 1098 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms