RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 MICALL2Q8IY33 904 aa16.93■□□□□ 0.3
SHF-210ENST00000561239 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
SHF-210ENST00000561239 SPEF2Q9C093 1822 aa16.93■□□□□ 0.3
SHF-210ENST00000561239 USP17L3A6NCW0 530 aa16.92■□□□□ 0.3
SHF-210ENST00000561239 USP17L4A6NCW7 530 aa16.92■□□□□ 0.3
SHF-210ENST00000561239 MVPQ14764 893 aaKnown RBP16.92■□□□□ 0.3
SHF-210ENST00000561239 MAP1SQ66K74 1059 aaPredicted RBP16.92■□□□□ 0.3
SHF-210ENST00000561239 USP17L1Q7RTZ2 530 aa16.92■□□□□ 0.3
SHF-210ENST00000561239 ITPRIPQ8IWB1 547 aa16.92■□□□□ 0.3
SHF-210ENST00000561239 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.92■□□□□ 0.3
SHF-210ENST00000561239 AGBL3Q8NEM8 1001 aa16.92■□□□□ 0.3
SHF-210ENST00000561239 ZNF594Q96JF6 807 aaPredicted RBP16.92■□□□□ 0.3
SHF-210ENST00000561239 CREBZFQ9NS37 354 aa16.92■□□□□ 0.3
SHF-210ENST00000561239 PASKQ96RG2 1323 aa16.92■□□□□ 0.3
SHF-210ENST00000561239 ADAMTSL1Q8N6G6 1762 aa16.92■□□□□ 0.3
SHF-210ENST00000561239 ITGBL1O95965 494 aaPredicted RBP16.91■□□□□ 0.3
SHF-210ENST00000561239 GNAI2P04899 355 aa16.91■□□□□ 0.3
SHF-210ENST00000561239 RRP1P56182 461 aaKnown RBP16.91■□□□□ 0.3
SHF-210ENST00000561239 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
SHF-210ENST00000561239 C15orf52Q6ZUT6 534 aaKnown RBP16.91■□□□□ 0.3
SHF-210ENST00000561239 A0A1B0GUL6 1792 aa16.91■□□□□ 0.3
SHF-210ENST00000561239 ZNF609O15014 1411 aa16.9■□□□□ 0.3
SHF-210ENST00000561239 MMP14P50281 582 aa16.9■□□□□ 0.3
SHF-210ENST00000561239 PTPN12Q05209 780 aaKnown RBP16.9■□□□□ 0.3
SHF-210ENST00000561239 DNAJC5GQ8N7S2 189 aa16.9■□□□□ 0.3
SHF-210ENST00000561239 KLRG1Q96E93 195 aa16.9■□□□□ 0.3
SHF-210ENST00000561239 KCNQ5Q9NR82 932 aa16.9■□□□□ 0.3
SHF-210ENST00000561239 RIPOR2Q9Y4F9 1068 aa16.9■□□□□ 0.3
SHF-210ENST00000561239 CEP350Q5VT06 3117 aa16.9■□□□□ 0.3
SHF-210ENST00000561239 MROH5Q6ZUA9 1318 aa16.9■□□□□ 0.3
SHF-210ENST00000561239 MYO3BQ8WXR4 1341 aa16.9■□□□□ 0.3
SHF-210ENST00000561239 TMEM88BA6NKF7 163 aa16.89■□□□□ 0.29
SHF-210ENST00000561239 TAF5LO75529 589 aa16.89■□□□□ 0.29
SHF-210ENST00000561239 STRIP1Q5VSL9 837 aa16.89■□□□□ 0.29
SHF-210ENST00000561239 ZNF804AQ7Z570 1209 aa16.89■□□□□ 0.29
SHF-210ENST00000561239 ZBTB40Q9NUA8 1239 aa16.89■□□□□ 0.29
SHF-210ENST00000561239 PGAP2Q9UHJ9 254 aa16.89■□□□□ 0.29
SHF-210ENST00000561239 DDX19BQ9UMR2 479 aa16.89■□□□□ 0.29
SHF-210ENST00000561239 COG6Q9Y2V7 657 aa16.89■□□□□ 0.29
SHF-210ENST00000561239 IRS2Q9Y4H2 1338 aa16.89■□□□□ 0.29
SHF-210ENST00000561239 WTIPA6NIX2 430 aaPredicted RBP16.88■□□□□ 0.29
SHF-210ENST00000561239 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
SHF-210ENST00000561239 HELBQ8NG08 1087 aaPredicted RBP16.88■□□□□ 0.29
SHF-210ENST00000561239 KLHDC4Q8TBB5 520 aa16.88■□□□□ 0.29
SHF-210ENST00000561239 PUS3Q9BZE2 481 aaKnown RBP16.88■□□□□ 0.29
SHF-210ENST00000561239 COPRSQ9NQ92 184 aa16.88■□□□□ 0.29
SHF-210ENST00000561239 FBXO3Q9UK99 471 aa16.88■□□□□ 0.29
SHF-210ENST00000561239 USP17L8P0C7I0 530 aa16.87■□□□□ 0.29
SHF-210ENST00000561239 HTRA3P83110 453 aa16.87■□□□□ 0.29
SHF-210ENST00000561239 TTLL5Q6EMB2 1281 aa16.87■□□□□ 0.29
SHF-210ENST00000561239 TXNRD3Q86VQ6 643 aa16.87■□□□□ 0.29
SHF-210ENST00000561239 OGFOD1Q8N543 542 aa16.87■□□□□ 0.29
SHF-210ENST00000561239 VGLL2Q8N8G2 317 aa16.87■□□□□ 0.29
SHF-210ENST00000561239 FBXW7Q969H0 707 aa16.87■□□□□ 0.29
SHF-210ENST00000561239 PNMA6EA0A0J9YXQ4 647 aa16.86■□□□□ 0.29
SHF-210ENST00000561239 ZNF280AP59817 542 aaPredicted RBP16.86■□□□□ 0.29
SHF-210ENST00000561239 POLA2Q14181 598 aa16.86■□□□□ 0.29
SHF-210ENST00000561239 LRRC24Q50LG9 513 aa16.86■□□□□ 0.29
SHF-210ENST00000561239 METTL24Q5JXM2 366 aa16.86■□□□□ 0.29
SHF-210ENST00000561239 CDC37L1Q7L3B6 337 aa16.86■□□□□ 0.29
SHF-210ENST00000561239 ATG9AQ7Z3C6 839 aa16.86■□□□□ 0.29
SHF-210ENST00000561239 SAMD7Q7Z3H4 446 aa16.86■□□□□ 0.29
SHF-210ENST00000561239 TRPM4Q8TD43 1214 aa16.86■□□□□ 0.29
SHF-210ENST00000561239 CD209Q9NNX6 404 aa16.86■□□□□ 0.29
SHF-210ENST00000561239 EYA2O00167 538 aa16.85■□□□□ 0.29
SHF-210ENST00000561239 SRGAP3O43295 1099 aa16.85■□□□□ 0.29
SHF-210ENST00000561239 CIAO1O76071 339 aa16.85■□□□□ 0.29
SHF-210ENST00000561239 KLRK1P26718 216 aa16.85■□□□□ 0.29
SHF-210ENST00000561239 HIRAP54198 1017 aaPredicted RBP16.85■□□□□ 0.29
SHF-210ENST00000561239 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
SHF-210ENST00000561239 KIF4BQ2VIQ3 1234 aa16.85■□□□□ 0.29
SHF-210ENST00000561239 TBC1D10BQ4KMP7 808 aaPredicted RBP16.85■□□□□ 0.29
SHF-210ENST00000561239 DACT2Q5SW24 774 aa16.85■□□□□ 0.29
SHF-210ENST00000561239 RBM26Q5T8P6 1007 aaKnown RBP16.85■□□□□ 0.29
SHF-210ENST00000561239 SSH3Q8TE77 659 aa16.85■□□□□ 0.29
SHF-210ENST00000561239 DCPSQ96C86 337 aaKnown RBP16.85■□□□□ 0.29
SHF-210ENST00000561239 GMLQ99445 158 aa16.85■□□□□ 0.29
SHF-210ENST00000561239 HDAC9Q9UKV0 1011 aa16.85■□□□□ 0.29
SHF-210ENST00000561239 SCN9AQ15858 1988 aa16.85■□□□□ 0.29
SHF-210ENST00000561239 IL1R1P14778 569 aa16.84■□□□□ 0.29
SHF-210ENST00000561239 CEP85Q6P2H3 762 aa16.84■□□□□ 0.29
SHF-210ENST00000561239 C1orf115Q9H7X2 142 aa16.84■□□□□ 0.29
SHF-210ENST00000561239 PSME4Q14997 1843 aa16.84■□□□□ 0.29
SHF-210ENST00000561239 SHTN1A0MZ66 631 aa16.83■□□□□ 0.28
SHF-210ENST00000561239 SNAP23O00161 211 aa16.83■□□□□ 0.28
SHF-210ENST00000561239 PDE8BO95263 885 aa16.83■□□□□ 0.28
SHF-210ENST00000561239 GTF2IP78347 998 aa16.83■□□□□ 0.28
SHF-210ENST00000561239 CAVIN4Q5BKX8 364 aa16.83■□□□□ 0.28
SHF-210ENST00000561239 VPS37DQ86XT2 251 aa16.83■□□□□ 0.28
SHF-210ENST00000561239 JMYQ8N9B5 988 aa16.83■□□□□ 0.28
SHF-210ENST00000561239 CHMP4BQ9H444 224 aaKnown RBP16.83■□□□□ 0.28
SHF-210ENST00000561239 MYOZ2Q9NPC6 264 aa16.83■□□□□ 0.28
SHF-210ENST00000561239 PA2G4Q9UQ80 394 aaKnown RBP16.83■□□□□ 0.28
SHF-210ENST00000561239 HIBADHP31937 336 aaKnown RBP16.82■□□□□ 0.28
SHF-210ENST00000561239 FKBP1AP62942 108 aaKnown RBP16.82■□□□□ 0.28
SHF-210ENST00000561239 SASH1O94885 1247 aa16.81■□□□□ 0.28
SHF-210ENST00000561239 FGFR2P21802 821 aa16.81■□□□□ 0.28
SHF-210ENST00000561239 PUM3Q15397 648 aaKnown RBP16.81■□□□□ 0.28
SHF-210ENST00000561239 KRT26Q7Z3Y9 468 aa16.81■□□□□ 0.28
SHF-210ENST00000561239 SULF1Q8IWU6 871 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms