RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 PRKCSHP14314 528 aaPredicted RBP9.44□□□□□ -0.9
GABPB1-211ENST00000561010 EIF6P56537 245 aaKnown RBP9.44□□□□□ -0.9
GABPB1-211ENST00000561010 LMOD3Q0VAK6 560 aa9.44□□□□□ -0.9
GABPB1-211ENST00000561010 PARP10Q53GL7 1025 aa9.44□□□□□ -0.9
GABPB1-211ENST00000561010 GPC2Q8N158 579 aa9.44□□□□□ -0.9
GABPB1-211ENST00000561010 ZC3H15Q8WU90 426 aaKnown RBP9.44□□□□□ -0.9
GABPB1-211ENST00000561010 NLRP3Q96P20 1036 aa9.44□□□□□ -0.9
GABPB1-211ENST00000561010 DDX21Q9NR30 783 aaKnown RBP eCLIP9.44□□□□□ -0.9
GABPB1-211ENST00000561010 HCSTQ9UBK5 93 aa9.44□□□□□ -0.9
GABPB1-211ENST00000561010 CNTNAP1P78357 1384 aa9.44□□□□□ -0.9
GABPB1-211ENST00000561010 ZNF646O15015 1829 aaPredicted RBP9.44□□□□□ -0.9
GABPB1-211ENST00000561010 AKAP11Q9UKA4 1901 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 SHTN1A0MZ66 631 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 TRAF5O00463 557 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 ELL2O00472 640 aaPredicted RBP9.43□□□□□ -0.9
GABPB1-211ENST00000561010 VEGFBP49765 207 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 SCNN1DP51172 638 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 TCIRG1Q13488 830 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 SLC10A5Q5PT55 438 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 HDGFL1Q5TGJ6 251 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 NIM1KQ8IY84 436 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 TNS4Q8IZW8 715 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 CNTROBQ8N137 903 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 TRMT112Q9UI30 125 aaKnown RBP9.43□□□□□ -0.9
GABPB1-211ENST00000561010 ATP6V0A2Q9Y487 856 aa9.43□□□□□ -0.9
GABPB1-211ENST00000561010 A0A1B0GUL6 1792 aa9.42□□□□□ -0.9
GABPB1-211ENST00000561010 THSD7BQ9C0I4 1608 aa9.42□□□□□ -0.9
GABPB1-211ENST00000561010 TMEM88BA6NKF7 163 aa9.42□□□□□ -0.9
GABPB1-211ENST00000561010 APAF1O14727 1248 aa9.42□□□□□ -0.9
GABPB1-211ENST00000561010 FOXN1O15353 648 aa9.42□□□□□ -0.9
GABPB1-211ENST00000561010 CCDC184Q52MB2 194 aa9.42□□□□□ -0.9
GABPB1-211ENST00000561010 DUSP27Q5VZP5 1158 aa9.42□□□□□ -0.9
GABPB1-211ENST00000561010 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
GABPB1-211ENST00000561010 JARID2Q92833 1246 aaPredicted RBP9.42□□□□□ -0.9
GABPB1-211ENST00000561010 FAM89AQ96GI7 184 aa9.42□□□□□ -0.9
GABPB1-211ENST00000561010 GPR101Q96P66 508 aaPredicted RBP9.42□□□□□ -0.9
GABPB1-211ENST00000561010 PRKRIP1Q9H875 184 aaPredicted RBP9.42□□□□□ -0.9
GABPB1-211ENST00000561010 BABAM1Q9NWV8 329 aa9.42□□□□□ -0.9
GABPB1-211ENST00000561010 SH3TC1Q8TE82 1336 aa9.41□□□□□ -0.9
GABPB1-211ENST00000561010 RAD17O75943 681 aa9.41□□□□□ -0.9
GABPB1-211ENST00000561010 LMOD1P29536 600 aaPredicted RBP9.41□□□□□ -0.9
GABPB1-211ENST00000561010 CXCL9Q07325 125 aa9.41□□□□□ -0.9
GABPB1-211ENST00000561010 ADAM33Q9BZ11 813 aa9.41□□□□□ -0.9
GABPB1-211ENST00000561010 PHAXQ9H814 394 aaKnown RBP9.41□□□□□ -0.9
GABPB1-211ENST00000561010 YDJCA8MPS7 323 aa9.4□□□□□ -0.9
GABPB1-211ENST00000561010 GMPSP49915 693 aaPredicted RBP9.4□□□□□ -0.9
GABPB1-211ENST00000561010 GRM1Q13255 1194 aa9.4□□□□□ -0.9
GABPB1-211ENST00000561010 GRAPQ13588 217 aa9.4□□□□□ -0.9
GABPB1-211ENST00000561010 TSR1Q2NL82 804 aaKnown RBP9.4□□□□□ -0.9
GABPB1-211ENST00000561010 HSP90AB3PQ58FF7 597 aa9.4□□□□□ -0.9
GABPB1-211ENST00000561010 DLK2Q6UY11 383 aa9.4□□□□□ -0.9
GABPB1-211ENST00000561010 DPP8Q6V1X1 898 aaPredicted RBP9.4□□□□□ -0.9
GABPB1-211ENST00000561010 DDX46Q7L014 1031 aaKnown RBP9.4□□□□□ -0.9
GABPB1-211ENST00000561010 PNMA8AQ86V59 439 aaPredicted RBP9.4□□□□□ -0.9
GABPB1-211ENST00000561010 SP8Q8IXZ3 490 aa9.4□□□□□ -0.9
GABPB1-211ENST00000561010 MPNDQ8N594 471 aa9.4□□□□□ -0.9
GABPB1-211ENST00000561010 PLBD2Q8NHP8 589 aa9.4□□□□□ -0.9
GABPB1-211ENST00000561010 GRAPLQ8TC17 118 aaPredicted RBP9.4□□□□□ -0.9
GABPB1-211ENST00000561010 CELF1Q92879 486 aaKnown RBP9.4□□□□□ -0.9
GABPB1-211ENST00000561010 ISCA1Q9BUE6 129 aa9.4□□□□□ -0.9
GABPB1-211ENST00000561010 ABT1Q9ULW3 272 aaKnown RBP9.4□□□□□ -0.9
GABPB1-211ENST00000561010 TK2O00142 265 aa9.39□□□□□ -0.91
GABPB1-211ENST00000561010 ZNF853P0CG23 659 aa9.39□□□□□ -0.91
GABPB1-211ENST00000561010 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
GABPB1-211ENST00000561010 TRPM4Q8TD43 1214 aa9.39□□□□□ -0.91
GABPB1-211ENST00000561010 CCDC85AQ96PX6 553 aaPredicted RBP9.39□□□□□ -0.91
GABPB1-211ENST00000561010 RTFDC1Q9BY42 306 aaPredicted RBP9.39□□□□□ -0.91
GABPB1-211ENST00000561010 CDHR5Q9HBB8 845 aa9.39□□□□□ -0.91
GABPB1-211ENST00000561010 KCNQ5Q9NR82 932 aa9.39□□□□□ -0.91
GABPB1-211ENST00000561010 GPRC5DQ9NZD1 345 aa9.39□□□□□ -0.91
GABPB1-211ENST00000561010 ZNRF3Q9ULT6 936 aa9.39□□□□□ -0.91
GABPB1-211ENST00000561010 BBOX1O75936 387 aa9.38□□□□□ -0.91
GABPB1-211ENST00000561010 GPSM2P81274 684 aa9.38□□□□□ -0.91
GABPB1-211ENST00000561010 C6orf132Q5T0Z8 1188 aa9.38□□□□□ -0.91
GABPB1-211ENST00000561010 CST9Q5W186 159 aa9.38□□□□□ -0.91
GABPB1-211ENST00000561010 TSPYL6Q8N831 410 aa9.38□□□□□ -0.91
GABPB1-211ENST00000561010 GLIS2Q9BZE0 524 aaPredicted RBP9.38□□□□□ -0.91
GABPB1-211ENST00000561010 TMX4Q9H1E5 349 aaPredicted RBP9.38□□□□□ -0.91
GABPB1-211ENST00000561010 DBNDD1Q9H9R9 158 aa9.38□□□□□ -0.91
GABPB1-211ENST00000561010 SEC31BQ9NQW1 1179 aa9.38□□□□□ -0.91
GABPB1-211ENST00000561010 DBF4Q9UBU7 674 aaPredicted RBP9.38□□□□□ -0.91
GABPB1-211ENST00000561010 WDR33Q9C0J8 1336 aaKnown RBP9.37□□□□□ -0.91
GABPB1-211ENST00000561010 RASSF10A6NK89 507 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 IRS4O14654 1257 aaPredicted RBP9.37□□□□□ -0.91
GABPB1-211ENST00000561010 GPR37O15354 613 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 ZMYND10O75800 440 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 PTPREP23469 700 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 LBX1P52954 281 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 HIRAP54198 1017 aaPredicted RBP9.37□□□□□ -0.91
GABPB1-211ENST00000561010 KIAA2012Q0VF49 1180 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 PTGDRQ13258 359 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 DEFB115Q30KQ5 88 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 GRIPAP1Q4V328 841 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 CIAPIN1Q6FI81 312 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 CYP4F22Q6NT55 531 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 RIC3Q7Z5B4 369 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 SUPT20HQ8NEM7 779 aa9.37□□□□□ -0.91
GABPB1-211ENST00000561010 TSR2Q969E8 191 aaKnown RBP9.37□□□□□ -0.91
GABPB1-211ENST00000561010 MYD88Q99836 296 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms