RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 GNAI2P04899 355 aa19.09■□□□□ 0.65
SNRPA1-213ENST00000560856 KCNJ4P48050 445 aa19.09■□□□□ 0.65
SNRPA1-213ENST00000560856 UBE4AQ14139 1066 aa19.09■□□□□ 0.65
SNRPA1-213ENST00000560856 SMC1BQ8NDV3 1235 aa19.09■□□□□ 0.65
SNRPA1-213ENST00000560856 DPF2Q92785 391 aa19.09■□□□□ 0.65
SNRPA1-213ENST00000560856 GMLQ99445 158 aa19.09■□□□□ 0.65
SNRPA1-213ENST00000560856 G3V3G9 751 aa19.08■□□□□ 0.64
SNRPA1-213ENST00000560856 LMOD1P29536 600 aaPredicted RBP19.08■□□□□ 0.64
SNRPA1-213ENST00000560856 DCAF8Q5TAQ9 597 aa19.08■□□□□ 0.64
SNRPA1-213ENST00000560856 YTHDC1Q96MU7 727 aaKnown RBP19.08■□□□□ 0.64
SNRPA1-213ENST00000560856 COPRSQ9NQ92 184 aa19.08■□□□□ 0.64
SNRPA1-213ENST00000560856 PA2G4Q9UQ80 394 aaKnown RBP19.08■□□□□ 0.64
SNRPA1-213ENST00000560856 ADAMTSL1Q8N6G6 1762 aa19.08■□□□□ 0.64
SNRPA1-213ENST00000560856 METTL24Q5JXM2 366 aa19.07■□□□□ 0.64
SNRPA1-213ENST00000560856 PNMA8AQ86V59 439 aaPredicted RBP19.07■□□□□ 0.64
SNRPA1-213ENST00000560856 LDHDQ86WU2 507 aa19.07■□□□□ 0.64
SNRPA1-213ENST00000560856 ITPRIPQ8IWB1 547 aa19.07■□□□□ 0.64
SNRPA1-213ENST00000560856 CD209Q9NNX6 404 aa19.07■□□□□ 0.64
SNRPA1-213ENST00000560856 CNOT7Q9UIV1 285 aaKnown RBP19.07■□□□□ 0.64
SNRPA1-213ENST00000560856 FBXO3Q9UK99 471 aa19.07■□□□□ 0.64
SNRPA1-213ENST00000560856 ZNF609O15014 1411 aa19.07■□□□□ 0.64
SNRPA1-213ENST00000560856 PSME4Q14997 1843 aa19.07■□□□□ 0.64
SNRPA1-213ENST00000560856 USP17L3A6NCW0 530 aa19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 USP17L4A6NCW7 530 aa19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 CIAO1O76071 339 aa19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 PDE8BO95263 885 aa19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 HSPA6P17066 643 aa19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 FGFR2P21802 821 aa19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 RPS12P25398 132 aaKnown RBP19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 EAPPQ56P03 285 aaPredicted RBP19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 DACT2Q5SW24 774 aa19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 CHADLQ6NUI6 762 aa19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 RSBN1LQ6PCB5 846 aaPredicted RBP19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 USP17L1Q7RTZ2 530 aa19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 ADARB2Q9NS39 739 aaKnown RBP19.06■□□□□ 0.64
SNRPA1-213ENST00000560856 ZNF646O15015 1829 aaPredicted RBP19.05■□□□□ 0.64
SNRPA1-213ENST00000560856 PNMA6EA0A0J9YXQ4 647 aa19.05■□□□□ 0.64
SNRPA1-213ENST00000560856 SRGAP3O43295 1099 aa19.05■□□□□ 0.64
SNRPA1-213ENST00000560856 IL1R1P14778 569 aa19.05■□□□□ 0.64
SNRPA1-213ENST00000560856 HIRAP54198 1017 aaPredicted RBP19.05■□□□□ 0.64
SNRPA1-213ENST00000560856 USP50Q70EL3 339 aaPredicted RBP19.05■□□□□ 0.64
SNRPA1-213ENST00000560856 MICALL2Q8IY33 904 aa19.05■□□□□ 0.64
SNRPA1-213ENST00000560856 FAM84BQ96KN1 310 aaPredicted RBP19.05■□□□□ 0.64
SNRPA1-213ENST00000560856 MS4A1P11836 297 aa19.04■□□□□ 0.64
SNRPA1-213ENST00000560856 STRIP1Q5VSL9 837 aa19.04■□□□□ 0.64
SNRPA1-213ENST00000560856 AGBL3Q8NEM8 1001 aa19.04■□□□□ 0.64
SNRPA1-213ENST00000560856 TRPM4Q8TD43 1214 aa19.04■□□□□ 0.64
SNRPA1-213ENST00000560856 SIL1Q9H173 461 aa19.04■□□□□ 0.64
SNRPA1-213ENST00000560856 ITGBL1O95965 494 aaPredicted RBP19.03■□□□□ 0.64
SNRPA1-213ENST00000560856 EGFRP00533 1210 aa19.03■□□□□ 0.64
SNRPA1-213ENST00000560856 ATP8B2P98198 1209 aa19.03■□□□□ 0.64
SNRPA1-213ENST00000560856 POLA2Q14181 598 aa19.03■□□□□ 0.64
SNRPA1-213ENST00000560856 FBXO33Q7Z6M2 555 aa19.03■□□□□ 0.64
SNRPA1-213ENST00000560856 MXD3Q9BW11 206 aa19.03■□□□□ 0.64
SNRPA1-213ENST00000560856 C1orf115Q9H7X2 142 aa19.03■□□□□ 0.64
SNRPA1-213ENST00000560856 PGAP2Q9UHJ9 254 aa19.03■□□□□ 0.64
SNRPA1-213ENST00000560856 H7C1D1 291 aa19.02■□□□□ 0.64
SNRPA1-213ENST00000560856 IL15P40933 162 aaPredicted RBP19.02■□□□□ 0.64
SNRPA1-213ENST00000560856 GYG1P46976 350 aa19.02■□□□□ 0.64
SNRPA1-213ENST00000560856 ZNF280AP59817 542 aaPredicted RBP19.02■□□□□ 0.64
SNRPA1-213ENST00000560856 MVPQ14764 893 aaKnown RBP19.02■□□□□ 0.64
SNRPA1-213ENST00000560856 C20orf194Q5TEA3 1177 aa19.02■□□□□ 0.64
SNRPA1-213ENST00000560856 TTLL5Q6EMB2 1281 aa19.02■□□□□ 0.64
SNRPA1-213ENST00000560856 SAMD7Q7Z3H4 446 aa19.02■□□□□ 0.64
SNRPA1-213ENST00000560856 ZNF804AQ7Z570 1209 aa19.02■□□□□ 0.64
SNRPA1-213ENST00000560856 TDRD7Q8NHU6 1098 aaKnown RBP19.02■□□□□ 0.64
SNRPA1-213ENST00000560856 GTF2IP78347 998 aa19.01■□□□□ 0.63
SNRPA1-213ENST00000560856 PUM3Q15397 648 aaKnown RBP19.01■□□□□ 0.63
SNRPA1-213ENST00000560856 MAP1SQ66K74 1059 aaPredicted RBP19.01■□□□□ 0.63
SNRPA1-213ENST00000560856 SSH3Q8TE77 659 aa19.01■□□□□ 0.63
SNRPA1-213ENST00000560856 CLEC11AQ9Y240 323 aa19.01■□□□□ 0.63
SNRPA1-213ENST00000560856 COG6Q9Y2V7 657 aa19.01■□□□□ 0.63
SNRPA1-213ENST00000560856 HIBADHP31937 336 aaKnown RBP19■□□□□ 0.63
SNRPA1-213ENST00000560856 PDE3AQ14432 1141 aa19■□□□□ 0.63
SNRPA1-213ENST00000560856 CERS5Q8N5B7 392 aa19■□□□□ 0.63
SNRPA1-213ENST00000560856 CEP126Q9P2H0 1117 aa19■□□□□ 0.63
SNRPA1-213ENST00000560856 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19■□□□□ 0.63
SNRPA1-213ENST00000560856 PASKQ96RG2 1323 aa19■□□□□ 0.63
SNRPA1-213ENST00000560856 SASH1O94885 1247 aa18.99■□□□□ 0.63
SNRPA1-213ENST00000560856 TBC1D10BQ4KMP7 808 aaPredicted RBP18.99■□□□□ 0.63
SNRPA1-213ENST00000560856 CNTROBQ8N137 903 aa18.99■□□□□ 0.63
SNRPA1-213ENST00000560856 LPIN2Q92539 896 aa18.99■□□□□ 0.63
SNRPA1-213ENST00000560856 ZBTB40Q9NUA8 1239 aa18.99■□□□□ 0.63
SNRPA1-213ENST00000560856 FAM205AQ6ZU69 1335 aa18.99■□□□□ 0.63
SNRPA1-213ENST00000560856 CEP350Q5VT06 3117 aa18.98■□□□□ 0.63
SNRPA1-213ENST00000560856 IFIT1P09914 478 aaKnown RBP18.98■□□□□ 0.63
SNRPA1-213ENST00000560856 USP17L8P0C7I0 530 aa18.98■□□□□ 0.63
SNRPA1-213ENST00000560856 BCAMP50895 628 aa18.98■□□□□ 0.63
SNRPA1-213ENST00000560856 CEP85Q6P2H3 762 aa18.98■□□□□ 0.63
SNRPA1-213ENST00000560856 ZC3H15Q8WU90 426 aaKnown RBP18.98■□□□□ 0.63
SNRPA1-213ENST00000560856 MYO3BQ8WXR4 1341 aa18.98■□□□□ 0.63
SNRPA1-213ENST00000560856 APLP1P51693 650 aa18.97■□□□□ 0.63
SNRPA1-213ENST00000560856 FKBP1AP62942 108 aaKnown RBP18.97■□□□□ 0.63
SNRPA1-213ENST00000560856 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.97■□□□□ 0.63
SNRPA1-213ENST00000560856 FBXW7Q969H0 707 aa18.97■□□□□ 0.63
SNRPA1-213ENST00000560856 DDX19BQ9UMR2 479 aa18.97■□□□□ 0.63
SNRPA1-213ENST00000560856 SLC5A1P13866 664 aa18.96■□□□□ 0.63
SNRPA1-213ENST00000560856 TFCP2Q12800 502 aa18.96■□□□□ 0.63
SNRPA1-213ENST00000560856 ATP2B3Q16720 1220 aa18.96■□□□□ 0.63
SNRPA1-213ENST00000560856 JAG2Q9Y219 1238 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms