RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 ZNF609O15014 1411 aa13.81□□□□□ -0.2
SNRPCP18-201ENST00000560619 COL4A5P29400 1685 aa13.8□□□□□ -0.2
SNRPCP18-201ENST00000560619 C1orf115Q9H7X2 142 aa13.8□□□□□ -0.2
SNRPCP18-201ENST00000560619 WDR90Q96KV7 1748 aa13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 PSME4Q14997 1843 aa13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 G3V3G9 751 aa13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 ECE2O60344 883 aa13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 IFIT1P09914 478 aaKnown RBP13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 IL1R1P14778 569 aa13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 DCAF8Q5TAQ9 597 aa13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 ZNF804AQ7Z570 1209 aa13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 ERC1Q8IUD2 1116 aa13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 HELBQ8NG08 1087 aaPredicted RBP13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 PPP4R2Q9NY27 417 aa13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 PA2G4Q9UQ80 394 aaKnown RBP13.79□□□□□ -0.2
SNRPCP18-201ENST00000560619 SCN4AP35499 1836 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 RIMBP2O15034 1052 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 RAB11FIP3O75154 756 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 SURF6O75683 361 aaKnown RBP13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 SLC5A1P13866 664 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 RPS12P25398 132 aaKnown RBP13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 CXCL9Q07325 125 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 CAVIN4Q5BKX8 364 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 CIAPIN1Q6FI81 312 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 FBXO33Q7Z6M2 555 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 SIRT2Q8IXJ6 389 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 ZNF784Q8NCA9 323 aaPredicted RBP13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 DPF2Q92785 391 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 SIL1Q9H173 461 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 CD209Q9NNX6 404 aa13.78□□□□□ -0.2
SNRPCP18-201ENST00000560619 IQCA1LA6NCM1 817 aa13.77□□□□□ -0.21
SNRPCP18-201ENST00000560619 YDJCA8MPS7 323 aa13.77□□□□□ -0.21
SNRPCP18-201ENST00000560619 SASH1O94885 1247 aa13.77□□□□□ -0.21
SNRPCP18-201ENST00000560619 VIL1P09327 827 aaKnown RBP13.77□□□□□ -0.21
SNRPCP18-201ENST00000560619 HIBADHP31937 336 aaKnown RBP13.77□□□□□ -0.21
SNRPCP18-201ENST00000560619 FKBP1AP62942 108 aaKnown RBP13.77□□□□□ -0.21
SNRPCP18-201ENST00000560619 STRIP1Q5VSL9 837 aa13.77□□□□□ -0.21
SNRPCP18-201ENST00000560619 TXNRD3Q86VQ6 643 aa13.77□□□□□ -0.21
SNRPCP18-201ENST00000560619 FAM84BQ96KN1 310 aaPredicted RBP13.77□□□□□ -0.21
SNRPCP18-201ENST00000560619 DBNDD1Q9H9R9 158 aa13.77□□□□□ -0.21
SNRPCP18-201ENST00000560619 GPBP1L1Q9HC44 474 aaPredicted RBP13.77□□□□□ -0.21
SNRPCP18-201ENST00000560619 MYO3BQ8WXR4 1341 aa13.76□□□□□ -0.21
SNRPCP18-201ENST00000560619 USP17L3A6NCW0 530 aa13.76□□□□□ -0.21
SNRPCP18-201ENST00000560619 USP17L4A6NCW7 530 aa13.76□□□□□ -0.21
SNRPCP18-201ENST00000560619 WTIPA6NIX2 430 aaPredicted RBP13.76□□□□□ -0.21
SNRPCP18-201ENST00000560619 VEGFAP15692 232 aaPredicted RBP13.76□□□□□ -0.21
SNRPCP18-201ENST00000560619 ATP2B3Q16720 1220 aa13.76□□□□□ -0.21
SNRPCP18-201ENST00000560619 DOK7Q18PE1 504 aa13.76□□□□□ -0.21
SNRPCP18-201ENST00000560619 USP17L1Q7RTZ2 530 aa13.76□□□□□ -0.21
SNRPCP18-201ENST00000560619 AGBL3Q8NEM8 1001 aa13.76□□□□□ -0.21
SNRPCP18-201ENST00000560619 TDRD7Q8NHU6 1098 aaKnown RBP13.76□□□□□ -0.21
SNRPCP18-201ENST00000560619 FAM205AQ6ZU69 1335 aa13.75□□□□□ -0.21
SNRPCP18-201ENST00000560619 ZNF541Q9H0D2 1346 aa13.75□□□□□ -0.21
SNRPCP18-201ENST00000560619 SCN9AQ15858 1988 aa13.75□□□□□ -0.21
SNRPCP18-201ENST00000560619 SEMA3EO15041 775 aa13.75□□□□□ -0.21
SNRPCP18-201ENST00000560619 DDNO94850 711 aaPredicted RBP13.75□□□□□ -0.21
SNRPCP18-201ENST00000560619 TFCP2Q12800 502 aa13.75□□□□□ -0.21
SNRPCP18-201ENST00000560619 CCDC136Q96JN2 1154 aa13.75□□□□□ -0.21
SNRPCP18-201ENST00000560619 GPR101Q96P66 508 aaPredicted RBP13.75□□□□□ -0.21
SNRPCP18-201ENST00000560619 DCTPP1Q9H773 170 aa13.75□□□□□ -0.21
SNRPCP18-201ENST00000560619 ARAP2Q8WZ64 1704 aa13.74□□□□□ -0.21
SNRPCP18-201ENST00000560619 SNAP23O00161 211 aa13.74□□□□□ -0.21
SNRPCP18-201ENST00000560619 OS9Q13438 667 aaPredicted RBP13.74□□□□□ -0.21
SNRPCP18-201ENST00000560619 HDAC1Q13547 482 aaPredicted RBP13.74□□□□□ -0.21
SNRPCP18-201ENST00000560619 VPS37DQ86XT2 251 aa13.74□□□□□ -0.21
SNRPCP18-201ENST00000560619 KIF1BPQ96EK5 621 aa13.74□□□□□ -0.21
SNRPCP18-201ENST00000560619 GNL3LQ9NVN8 582 aaKnown RBP13.74□□□□□ -0.21
SNRPCP18-201ENST00000560619 PDS5AQ29RF7 1337 aaKnown RBP13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 POTECB2RU33 542 aa13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 PSMD14O00487 310 aa13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 IGSF3O75054 1194 aa13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 RAD17O75943 681 aa13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 KLRK1P26718 216 aa13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 TTLL5Q6EMB2 1281 aa13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 RSBN1LQ6PCB5 846 aaPredicted RBP13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 PNMA8AQ86V59 439 aaPredicted RBP13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 ZNF512BQ96KM6 892 aaPredicted RBP13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 SUGT1Q9Y2Z0 365 aa13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 PCDHB15Q9Y5E8 787 aa13.73□□□□□ -0.21
SNRPCP18-201ENST00000560619 LMOD1P29536 600 aaPredicted RBP13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 GYG1P46976 350 aa13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 SCNN1DP51172 638 aa13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 TNNI3KQ59H18 835 aa13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 DACT2Q5SW24 774 aa13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 B4GALNT3Q6L9W6 998 aa13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 RHPN1Q8TCX5 695 aa13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 TBC1D22AQ8WUA7 517 aa13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 GMLQ99445 158 aa13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 GPRC5DQ9NZD1 345 aa13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 HACL1Q9UJ83 578 aa13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 FPGT-TNNI3KV9GXZ4 949 aa13.72□□□□□ -0.21
SNRPCP18-201ENST00000560619 ZNF646O15015 1829 aaPredicted RBP13.71□□□□□ -0.21
SNRPCP18-201ENST00000560619 KIF3CO14782 793 aa13.71□□□□□ -0.21
SNRPCP18-201ENST00000560619 BCAMP50895 628 aa13.71□□□□□ -0.21
SNRPCP18-201ENST00000560619 TIMM10P62072 90 aa13.71□□□□□ -0.21
SNRPCP18-201ENST00000560619 XAGE2Q96GT9 111 aa13.71□□□□□ -0.21
SNRPCP18-201ENST00000560619 MRIQ9BWK5 157 aa13.71□□□□□ -0.21
SNRPCP18-201ENST00000560619 RRAGCQ9HB90 399 aa13.71□□□□□ -0.21
SNRPCP18-201ENST00000560619 KCNQ5Q9NR82 932 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms