RNA–Protein interactions for RNA: ENST00000560563.1

ACTC1-203, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 2

Gene ACTC1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-203ENST00000560563 PDGFDQ9GZP0 370 aaPredicted RBP10.42□□□□□ -0.74
ACTC1-203ENST00000560563 TRMT112Q9UI30 125 aaKnown RBP10.42□□□□□ -0.74
ACTC1-203ENST00000560563 FAM177BA6PVY3 158 aa10.41□□□□□ -0.74
ACTC1-203ENST00000560563 RNF40O75150 1001 aa10.41□□□□□ -0.74
ACTC1-203ENST00000560563 R3HDM1Q15032 1099 aaKnown RBP10.41□□□□□ -0.74
ACTC1-203ENST00000560563 NYAP1Q6ZVC0 841 aa10.41□□□□□ -0.74
ACTC1-203ENST00000560563 FAM89AQ96GI7 184 aa10.41□□□□□ -0.74
ACTC1-203ENST00000560563 SUCLG2Q96I99 432 aa10.41□□□□□ -0.74
ACTC1-203ENST00000560563 NYXQ9GZU5 481 aa10.41□□□□□ -0.74
ACTC1-203ENST00000560563 C1orf115Q9H7X2 142 aa10.41□□□□□ -0.74
ACTC1-203ENST00000560563 HDAC5Q9UQL6 1122 aa10.41□□□□□ -0.74
ACTC1-203ENST00000560563 GTF3C3Q9Y5Q9 886 aa10.41□□□□□ -0.74
ACTC1-203ENST00000560563 LRRFIP2Q9Y608 721 aaKnown RBP10.41□□□□□ -0.74
ACTC1-203ENST00000560563 CARMIL3Q8ND23 1372 aa10.4□□□□□ -0.74
ACTC1-203ENST00000560563 AFDNP55196 1824 aaKnown RBP10.4□□□□□ -0.74
ACTC1-203ENST00000560563 SH3TC1Q8TE82 1336 aa10.4□□□□□ -0.74
ACTC1-203ENST00000560563 CDHR2Q9BYE9 1310 aa10.4□□□□□ -0.74
ACTC1-203ENST00000560563 IRS4O14654 1257 aaPredicted RBP10.4□□□□□ -0.74
ACTC1-203ENST00000560563 DDR1Q08345 913 aa10.4□□□□□ -0.74
ACTC1-203ENST00000560563 RTL5Q5HYW3 569 aaPredicted RBP10.4□□□□□ -0.74
ACTC1-203ENST00000560563 TPTE2Q6XPS3 522 aa10.4□□□□□ -0.74
ACTC1-203ENST00000560563 NBPF5PQ86XG9 351 aaPredicted RBP10.4□□□□□ -0.74
ACTC1-203ENST00000560563 SYNE4Q8N205 404 aa10.4□□□□□ -0.74
ACTC1-203ENST00000560563 KAZALD1Q96I82 304 aa10.4□□□□□ -0.74
ACTC1-203ENST00000560563 PCDHB15Q9Y5E8 787 aa10.4□□□□□ -0.74
ACTC1-203ENST00000560563 COL24A1Q17RW2 1714 aa10.39□□□□□ -0.75
ACTC1-203ENST00000560563 POLRMTO00411 1230 aaKnown RBP10.39□□□□□ -0.75
ACTC1-203ENST00000560563 SERPINB2P05120 415 aa10.39□□□□□ -0.75
ACTC1-203ENST00000560563 ERFEQ4G0M1 354 aa10.39□□□□□ -0.75
ACTC1-203ENST00000560563 EPHA10Q5JZY3 1008 aa10.39□□□□□ -0.75
ACTC1-203ENST00000560563 SLC10A5Q5PT55 438 aa10.39□□□□□ -0.75
ACTC1-203ENST00000560563 MSL1Q68DK7 614 aa10.39□□□□□ -0.75
ACTC1-203ENST00000560563 CEP85Q6P2H3 762 aa10.39□□□□□ -0.75
ACTC1-203ENST00000560563 PADI6Q6TGC4 694 aa10.39□□□□□ -0.75
ACTC1-203ENST00000560563 NUTM1Q86Y26 1132 aa10.39□□□□□ -0.75
ACTC1-203ENST00000560563 RPAP2Q8IXW5 612 aaPredicted RBP10.39□□□□□ -0.75
ACTC1-203ENST00000560563 PLA2G12BQ9BX93 195 aa10.39□□□□□ -0.75
ACTC1-203ENST00000560563 PDE8AO60658 829 aa10.38□□□□□ -0.75
ACTC1-203ENST00000560563 ITGBL1O95965 494 aaPredicted RBP10.38□□□□□ -0.75
ACTC1-203ENST00000560563 MMP10P09238 476 aa10.38□□□□□ -0.75
ACTC1-203ENST00000560563 HSP90B1P14625 803 aaKnown RBP10.38□□□□□ -0.75
ACTC1-203ENST00000560563 GTF2E1P29083 439 aaPredicted RBP10.38□□□□□ -0.75
ACTC1-203ENST00000560563 FOXO4P98177 505 aa10.38□□□□□ -0.75
ACTC1-203ENST00000560563 RABL6Q3YEC7 729 aaPredicted RBP10.38□□□□□ -0.75
ACTC1-203ENST00000560563 ANKRD44Q8N8A2 993 aa10.38□□□□□ -0.75
ACTC1-203ENST00000560563 BICC1Q9H694 974 aaKnown RBP10.38□□□□□ -0.75
ACTC1-203ENST00000560563 NPDC1Q9NQX5 325 aaPredicted RBP10.38□□□□□ -0.75
ACTC1-203ENST00000560563 PPP4R2Q9NY27 417 aa10.38□□□□□ -0.75
ACTC1-203ENST00000560563 PARP3Q9Y6F1 533 aa10.38□□□□□ -0.75
ACTC1-203ENST00000560563 HCLS1P14317 486 aaPredicted RBP10.37□□□□□ -0.75
ACTC1-203ENST00000560563 ATP8B2P98198 1209 aa10.37□□□□□ -0.75
ACTC1-203ENST00000560563 KCNC4Q03721 635 aa10.37□□□□□ -0.75
ACTC1-203ENST00000560563 MTX1Q13505 466 aa10.37□□□□□ -0.75
ACTC1-203ENST00000560563 PRR5LQ6MZQ0 368 aa10.37□□□□□ -0.75
ACTC1-203ENST00000560563 SIRT2Q8IXJ6 389 aa10.37□□□□□ -0.75
ACTC1-203ENST00000560563 CNBD1Q8NA66 436 aa10.37□□□□□ -0.75
ACTC1-203ENST00000560563 CASZ1Q86V15 1759 aa10.37□□□□□ -0.75
ACTC1-203ENST00000560563 SOCS7O14512 581 aa10.36□□□□□ -0.75
ACTC1-203ENST00000560563 NPHP1O15259 732 aa10.36□□□□□ -0.75
ACTC1-203ENST00000560563 ZBTB7AO95365 584 aa10.36□□□□□ -0.75
ACTC1-203ENST00000560563 CSF1RP07333 972 aa10.36□□□□□ -0.75
ACTC1-203ENST00000560563 CTSWP56202 376 aa10.36□□□□□ -0.75
ACTC1-203ENST00000560563 LMBR1LQ6UX01 489 aa10.36□□□□□ -0.75
ACTC1-203ENST00000560563 CCDC24Q8N4L8 307 aa10.36□□□□□ -0.75
ACTC1-203ENST00000560563 TTLL11Q8NHH1 800 aa10.36□□□□□ -0.75
ACTC1-203ENST00000560563 MTFR1LQ9H019 292 aa10.36□□□□□ -0.75
ACTC1-203ENST00000560563 ABCC12Q96J65 1359 aa10.36□□□□□ -0.75
ACTC1-203ENST00000560563 PNMA6EA0A0J9YXQ4 647 aa10.35□□□□□ -0.75
ACTC1-203ENST00000560563 HMMRO75330 724 aa10.35□□□□□ -0.75
ACTC1-203ENST00000560563 ST5P78524 1137 aa10.35□□□□□ -0.75
ACTC1-203ENST00000560563 HDAC1Q13547 482 aaPredicted RBP10.35□□□□□ -0.75
ACTC1-203ENST00000560563 SF3B3Q15393 1217 aaKnown RBP10.35□□□□□ -0.75
ACTC1-203ENST00000560563 SSH3Q8TE77 659 aa10.35□□□□□ -0.75
ACTC1-203ENST00000560563 CCDC136Q96JN2 1154 aa10.35□□□□□ -0.75
ACTC1-203ENST00000560563 RIC1Q4ADV7 1423 aa10.34□□□□□ -0.75
ACTC1-203ENST00000560563 NRXN2Q9P2S2 1712 aa10.34□□□□□ -0.75
ACTC1-203ENST00000560563 SRGAP3O43295 1099 aa10.34□□□□□ -0.75
ACTC1-203ENST00000560563 IGHDP01880 384 aa10.34□□□□□ -0.75
ACTC1-203ENST00000560563 B4GALNT3Q6L9W6 998 aa10.34□□□□□ -0.75
ACTC1-203ENST00000560563 NLRP3Q96P20 1036 aa10.34□□□□□ -0.75
ACTC1-203ENST00000560563 RWDD1Q9H446 243 aaPredicted RBP10.34□□□□□ -0.75
ACTC1-203ENST00000560563 RBM27Q9P2N5 1060 aaKnown RBP10.34□□□□□ -0.75
ACTC1-203ENST00000560563 CHMP3Q9Y3E7 222 aa10.34□□□□□ -0.75
ACTC1-203ENST00000560563 DDX60Q8IY21 1712 aaKnown RBP10.33□□□□□ -0.76
ACTC1-203ENST00000560563 POLD1P28340 1107 aa10.33□□□□□ -0.76
ACTC1-203ENST00000560563 RFX5P48382 616 aaPredicted RBP10.33□□□□□ -0.76
ACTC1-203ENST00000560563 FAM161AQ3B820 660 aa10.33□□□□□ -0.76
ACTC1-203ENST00000560563 CCDC152Q4G0S7 254 aa10.33□□□□□ -0.76
ACTC1-203ENST00000560563 CCDC85AQ96PX6 553 aaPredicted RBP10.33□□□□□ -0.76
ACTC1-203ENST00000560563 BRIP1Q9BX63 1249 aa10.33□□□□□ -0.76
ACTC1-203ENST00000560563 GREM2Q9H772 168 aa10.33□□□□□ -0.76
ACTC1-203ENST00000560563 RTL9Q8NET4 1388 aa10.33□□□□□ -0.76
ACTC1-203ENST00000560563 LAMB2P55268 1798 aa10.32□□□□□ -0.76
ACTC1-203ENST00000560563 KLRG2A4D1S0 409 aaPredicted RBP10.32□□□□□ -0.76
ACTC1-203ENST00000560563 RGS20O76081 388 aa10.32□□□□□ -0.76
ACTC1-203ENST00000560563 PTPN12Q05209 780 aaKnown RBP10.32□□□□□ -0.76
ACTC1-203ENST00000560563 IFIT5Q13325 482 aaKnown RBP10.32□□□□□ -0.76
ACTC1-203ENST00000560563 CCDC57Q2TAC2 916 aa10.32□□□□□ -0.76
ACTC1-203ENST00000560563 DCTPP1Q9H773 170 aa10.32□□□□□ -0.76
ACTC1-203ENST00000560563 COPRSQ9NQ92 184 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms