RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 SEMA6BQ9H3T3 888 aa6.93□□□□□ -1.3
TMOD3-207ENST00000560549 H3BRB1 525 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 DLL1O00548 723 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 GHRHP01286 108 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 H2AFB1P0C5Y9 115 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 H2AFB2P0C5Z0 115 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 ARHGAP4P98171 946 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 SF3B2Q13435 895 aaKnown RBP6.92□□□□□ -1.3
TMOD3-207ENST00000560549 TUT1Q9H6E5 874 aaKnown RBP6.92□□□□□ -1.3
TMOD3-207ENST00000560549 FOXD3Q9UJU5 478 aaPredicted RBP6.92□□□□□ -1.3
TMOD3-207ENST00000560549 TRPA1O75762 1119 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 FAM13AO94988 1023 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 TTC39BQ5VTQ0 682 aaPredicted RBP6.92□□□□□ -1.3
TMOD3-207ENST00000560549 GJD3Q8N144 294 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 CACTIN-AS1Q8N1I8 211 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 CEP120Q8N960 986 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 HHIPQ96QV1 700 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 SRA1Q9HD15 236 aaKnown RBP6.92□□□□□ -1.3
TMOD3-207ENST00000560549 EGFL7Q9UHF1 273 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 SALL4Q9UJQ4 1053 aa6.92□□□□□ -1.3
TMOD3-207ENST00000560549 TM4SF5O14894 197 aa6.91□□□□□ -1.3
TMOD3-207ENST00000560549 HYAL2Q12891 473 aa6.91□□□□□ -1.3
TMOD3-207ENST00000560549 IGF2-ASQ6U949 168 aa6.91□□□□□ -1.3
TMOD3-207ENST00000560549 AEBP1Q8IUX7 1158 aa6.91□□□□□ -1.3
TMOD3-207ENST00000560549 FAM9AQ8IZU1 332 aaPredicted RBP6.91□□□□□ -1.3
TMOD3-207ENST00000560549 NFKBIEO00221 500 aa6.9□□□□□ -1.31
TMOD3-207ENST00000560549 EREGO14944 169 aa6.9□□□□□ -1.31
TMOD3-207ENST00000560549 TNFRSF21O75509 655 aa6.9□□□□□ -1.31
TMOD3-207ENST00000560549 XP32Q5T750 250 aa6.9□□□□□ -1.31
TMOD3-207ENST00000560549 ALKBH2Q6NS38 261 aa6.9□□□□□ -1.31
TMOD3-207ENST00000560549 LACRTQ9GZZ8 138 aa6.9□□□□□ -1.31
TMOD3-207ENST00000560549 MTMR7Q9Y216 660 aa6.9□□□□□ -1.31
TMOD3-207ENST00000560549 BRD1O95696 1058 aa6.89□□□□□ -1.31
TMOD3-207ENST00000560549 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
TMOD3-207ENST00000560549 CEP135Q66GS9 1140 aa6.89□□□□□ -1.31
TMOD3-207ENST00000560549 TXNDC11Q6PKC3 985 aa6.89□□□□□ -1.31
TMOD3-207ENST00000560549 Q8N3U1 123 aa6.89□□□□□ -1.31
TMOD3-207ENST00000560549 IL22RA1Q8N6P7 574 aa6.89□□□□□ -1.31
TMOD3-207ENST00000560549 RBSNQ9H1K0 784 aa6.89□□□□□ -1.31
TMOD3-207ENST00000560549 NOS3P29474 1203 aa6.88□□□□□ -1.31
TMOD3-207ENST00000560549 AAMPQ13685 434 aa6.88□□□□□ -1.31
TMOD3-207ENST00000560549 FOXD4L6Q3SYB3 417 aaPredicted RBP6.88□□□□□ -1.31
TMOD3-207ENST00000560549 B4GALNT3Q6L9W6 998 aa6.88□□□□□ -1.31
TMOD3-207ENST00000560549 FOXD4L3Q6VB84 417 aaPredicted RBP6.88□□□□□ -1.31
TMOD3-207ENST00000560549 MAP4K3Q8IVH8 894 aa6.88□□□□□ -1.31
TMOD3-207ENST00000560549 WFDC12Q8WWY7 111 aa6.88□□□□□ -1.31
TMOD3-207ENST00000560549 POP1Q99575 1024 aaKnown RBP6.88□□□□□ -1.31
TMOD3-207ENST00000560549 IGHA2P01877 340 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 RPLP1P05386 114 aaKnown RBP6.87□□□□□ -1.31
TMOD3-207ENST00000560549 EPHA1P21709 976 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 CES1P23141 567 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 NCAPG2Q86XI2 1143 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 GLYCTKQ8IVS8 523 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 TMEM130Q8N3G9 435 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 GALNT11Q8NCW6 608 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 PBX4Q9BYU1 374 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 MUC3BQ9H195 1237 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 LATS2Q9NRM7 1088 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 DZANK1Q9NVP4 752 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 USP21Q9UK80 565 aa6.87□□□□□ -1.31
TMOD3-207ENST00000560549 ZBTB7CA1YPR0 619 aa6.86□□□□□ -1.31
TMOD3-207ENST00000560549 PEAR1Q5VY43 1037 aaPredicted RBP6.86□□□□□ -1.31
TMOD3-207ENST00000560549 Q6ZS46 218 aa6.86□□□□□ -1.31
TMOD3-207ENST00000560549 SH2B1Q9NRF2 756 aaPredicted RBP6.86□□□□□ -1.31
TMOD3-207ENST00000560549 LINC01387J3KSC0 135 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 PCSK2P16519 638 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 PDE4CQ08493 712 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 PRSS36Q5K4E3 855 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 DZIP1LQ8IYY4 767 aaKnown RBP6.85□□□□□ -1.31
TMOD3-207ENST00000560549 SNX29Q8TEQ0 813 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 SPACA7Q96KW9 195 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 ZKSCAN3Q9BRR0 538 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 ERCC6Q03468 1493 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 SMNDC1O75940 238 aaKnown RBP eCLIP6.85□□□□□ -1.31
TMOD3-207ENST00000560549 CDC25BP30305 580 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 KCNA1Q09470 495 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 USPL1Q5W0Q7 1092 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 DCAF11Q8TEB1 546 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 MEGF10Q96KG7 1140 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 MRPL18Q9H0U6 180 aaKnown RBP6.85□□□□□ -1.31
TMOD3-207ENST00000560549 KCNK4Q9NYG8 393 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 PPME1Q9Y570 386 aa6.85□□□□□ -1.31
TMOD3-207ENST00000560549 ABCC8Q09428 1581 aa6.84□□□□□ -1.31
TMOD3-207ENST00000560549 F8W735 103 aaPredicted RBP6.84□□□□□ -1.31
TMOD3-207ENST00000560549 GPR182O15218 404 aa6.84□□□□□ -1.31
TMOD3-207ENST00000560549 PHACTR2O75167 634 aa6.84□□□□□ -1.31
TMOD3-207ENST00000560549 WISP1O95388 367 aa6.84□□□□□ -1.31
TMOD3-207ENST00000560549 POLR3DP05423 398 aaPredicted RBP6.84□□□□□ -1.31
TMOD3-207ENST00000560549 USP5P45974 858 aa6.84□□□□□ -1.31
TMOD3-207ENST00000560549 IREB2P48200 963 aaKnown RBP6.84□□□□□ -1.31
TMOD3-207ENST00000560549 TP53INP1Q96A56 240 aa6.84□□□□□ -1.31
TMOD3-207ENST00000560549 FAM129BQ96TA1 746 aa6.84□□□□□ -1.31
TMOD3-207ENST00000560549 CARD10Q9BWT7 1032 aa6.84□□□□□ -1.31
TMOD3-207ENST00000560549 ADAM19Q9H013 955 aa6.84□□□□□ -1.31
TMOD3-207ENST00000560549 LAMC3Q9Y6N6 1575 aa6.84□□□□□ -1.32
TMOD3-207ENST00000560549 NESP48681 1621 aa6.83□□□□□ -1.32
TMOD3-207ENST00000560549 SOWAHDA6NJG2 315 aa6.83□□□□□ -1.32
TMOD3-207ENST00000560549 ALX3O95076 343 aa6.83□□□□□ -1.32
TMOD3-207ENST00000560549 ORC1Q13415 861 aa6.83□□□□□ -1.32
TMOD3-207ENST00000560549 ZMYM1Q5SVZ6 1142 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms