RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 MMP14P50281 582 aa17.33■□□□□ 0.36
PKNOX1-209ENST00000560448 C20orf194Q5TEA3 1177 aa17.33■□□□□ 0.36
PKNOX1-209ENST00000560448 ATG9AQ7Z3C6 839 aa17.33■□□□□ 0.36
PKNOX1-209ENST00000560448 KLHDC4Q8TBB5 520 aa17.33■□□□□ 0.36
PKNOX1-209ENST00000560448 IRS2Q9Y4H2 1338 aa17.32■□□□□ 0.36
PKNOX1-209ENST00000560448 IFIT1P09914 478 aaKnown RBP17.32■□□□□ 0.36
PKNOX1-209ENST00000560448 RPS12P25398 132 aaKnown RBP17.32■□□□□ 0.36
PKNOX1-209ENST00000560448 CXCL9Q07325 125 aa17.32■□□□□ 0.36
PKNOX1-209ENST00000560448 G3BP1Q13283 466 aaKnown RBP eCLIP17.32■□□□□ 0.36
PKNOX1-209ENST00000560448 HSP90AB4PQ58FF6 505 aa17.32■□□□□ 0.36
PKNOX1-209ENST00000560448 CAVIN4Q5BKX8 364 aa17.32■□□□□ 0.36
PKNOX1-209ENST00000560448 LPIN2Q92539 896 aa17.32■□□□□ 0.36
PKNOX1-209ENST00000560448 DBNDD1Q9H9R9 158 aa17.32■□□□□ 0.36
PKNOX1-209ENST00000560448 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
PKNOX1-209ENST00000560448 PSME4Q14997 1843 aa17.32■□□□□ 0.36
PKNOX1-209ENST00000560448 MYO3BQ8WXR4 1341 aa17.31■□□□□ 0.36
PKNOX1-209ENST00000560448 YDJCA8MPS7 323 aa17.31■□□□□ 0.36
PKNOX1-209ENST00000560448 ZBTB22O15209 634 aa17.31■□□□□ 0.36
PKNOX1-209ENST00000560448 DDNO94850 711 aaPredicted RBP17.31■□□□□ 0.36
PKNOX1-209ENST00000560448 HELBQ8NG08 1087 aaPredicted RBP17.31■□□□□ 0.36
PKNOX1-209ENST00000560448 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
PKNOX1-209ENST00000560448 SLC5A1P13866 664 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 FGFR2P21802 821 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 LMOD1P29536 600 aaPredicted RBP17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 ERC1Q8IUD2 1116 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 DPF2Q92785 391 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 SIL1Q9H173 461 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 PPP4R2Q9NY27 417 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 VIL1P09327 827 aaKnown RBP17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 IL1R1P14778 569 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 DOK7Q18PE1 504 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 STRIP1Q5VSL9 837 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 AGBL3Q8NEM8 1001 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 ZNF526Q8TF50 670 aaPredicted RBP17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 GPR101Q96P66 508 aaPredicted RBP17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 CD209Q9NNX6 404 aa17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 PA2G4Q9UQ80 394 aaKnown RBP17.3■□□□□ 0.36
PKNOX1-209ENST00000560448 USP17L3A6NCW0 530 aa17.29■□□□□ 0.36
PKNOX1-209ENST00000560448 USP17L4A6NCW7 530 aa17.29■□□□□ 0.36
PKNOX1-209ENST00000560448 HIBADHP31937 336 aaKnown RBP17.29■□□□□ 0.36
PKNOX1-209ENST00000560448 USP17L1Q7RTZ2 530 aa17.29■□□□□ 0.36
PKNOX1-209ENST00000560448 PNMA8AQ86V59 439 aaPredicted RBP17.29■□□□□ 0.36
PKNOX1-209ENST00000560448 VPS37DQ86XT2 251 aa17.29■□□□□ 0.36
PKNOX1-209ENST00000560448 C16orf71Q8IYS4 520 aaPredicted RBP17.29■□□□□ 0.36
PKNOX1-209ENST00000560448 GPR108Q9NPR9 543 aa17.29■□□□□ 0.36
PKNOX1-209ENST00000560448 HACL1Q9UJ83 578 aa17.29■□□□□ 0.36
PKNOX1-209ENST00000560448 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
PKNOX1-209ENST00000560448 SURF6O75683 361 aaKnown RBP17.28■□□□□ 0.36
PKNOX1-209ENST00000560448 RAD17O75943 681 aa17.28■□□□□ 0.36
PKNOX1-209ENST00000560448 FKBP1AP62942 108 aaKnown RBP17.28■□□□□ 0.36
PKNOX1-209ENST00000560448 ATP2B3Q16720 1220 aa17.28■□□□□ 0.36
PKNOX1-209ENST00000560448 TXNRD3Q86VQ6 643 aa17.28■□□□□ 0.36
PKNOX1-209ENST00000560448 RRAGCQ9HB90 399 aa17.28■□□□□ 0.36
PKNOX1-209ENST00000560448 NMRK2Q9NPI5 230 aa17.28■□□□□ 0.36
PKNOX1-209ENST00000560448 PSMD14O00487 310 aa17.27■□□□□ 0.35
PKNOX1-209ENST00000560448 KIF3CO14782 793 aa17.27■□□□□ 0.35
PKNOX1-209ENST00000560448 SASH1O94885 1247 aa17.27■□□□□ 0.35
PKNOX1-209ENST00000560448 FAM84BQ96KN1 310 aaPredicted RBP17.27■□□□□ 0.35
PKNOX1-209ENST00000560448 GPRC5DQ9NZD1 345 aa17.27■□□□□ 0.35
PKNOX1-209ENST00000560448 TOMM70O94826 608 aa17.26■□□□□ 0.35
PKNOX1-209ENST00000560448 KLRK1P26718 216 aa17.26■□□□□ 0.35
PKNOX1-209ENST00000560448 SCNN1DP51172 638 aa17.26■□□□□ 0.35
PKNOX1-209ENST00000560448 OS9Q13438 667 aaPredicted RBP17.26■□□□□ 0.35
PKNOX1-209ENST00000560448 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
PKNOX1-209ENST00000560448 FBXO33Q7Z6M2 555 aa17.26■□□□□ 0.35
PKNOX1-209ENST00000560448 GNL3LQ9NVN8 582 aaKnown RBP17.26■□□□□ 0.35
PKNOX1-209ENST00000560448 SCN9AQ15858 1988 aa17.26■□□□□ 0.35
PKNOX1-209ENST00000560448 ARAP2Q8WZ64 1704 aa17.25■□□□□ 0.35
PKNOX1-209ENST00000560448 WTIPA6NIX2 430 aaPredicted RBP17.25■□□□□ 0.35
PKNOX1-209ENST00000560448 POTECB2RU33 542 aa17.25■□□□□ 0.35
PKNOX1-209ENST00000560448 SEMA3EO15041 775 aa17.25■□□□□ 0.35
PKNOX1-209ENST00000560448 RAB11FIP3O75154 756 aa17.25■□□□□ 0.35
PKNOX1-209ENST00000560448 TTLL5Q6EMB2 1281 aa17.25■□□□□ 0.35
PKNOX1-209ENST00000560448 TDRD7Q8NHU6 1098 aaKnown RBP17.25■□□□□ 0.35
PKNOX1-209ENST00000560448 FAM205AQ6ZU69 1335 aa17.25■□□□□ 0.35
PKNOX1-209ENST00000560448 H7C1D1 291 aa17.24■□□□□ 0.35
PKNOX1-209ENST00000560448 SNAP23O00161 211 aa17.24■□□□□ 0.35
PKNOX1-209ENST00000560448 EPHX2P34913 555 aa17.24■□□□□ 0.35
PKNOX1-209ENST00000560448 DACT2Q5SW24 774 aa17.24■□□□□ 0.35
PKNOX1-209ENST00000560448 USP50Q70EL3 339 aaPredicted RBP17.24■□□□□ 0.35
PKNOX1-209ENST00000560448 RBM46Q8TBY0 533 aaKnown RBP17.24■□□□□ 0.35
PKNOX1-209ENST00000560448 TBC1D22AQ8WUA7 517 aa17.24■□□□□ 0.35
PKNOX1-209ENST00000560448 TAF1DQ9H5J8 278 aaPredicted RBP17.24■□□□□ 0.35
PKNOX1-209ENST00000560448 ADARB2Q9NS39 739 aaKnown RBP17.24■□□□□ 0.35
PKNOX1-209ENST00000560448 A0A1B0GUL7 405 aa17.23■□□□□ 0.35
PKNOX1-209ENST00000560448 GYG1P46976 350 aa17.23■□□□□ 0.35
PKNOX1-209ENST00000560448 GMPSP49915 693 aaPredicted RBP17.23■□□□□ 0.35
PKNOX1-209ENST00000560448 TFCP2Q12800 502 aa17.23■□□□□ 0.35
PKNOX1-209ENST00000560448 SIRT2Q8IXJ6 389 aa17.22■□□□□ 0.35
PKNOX1-209ENST00000560448 OGFOD1Q8N543 542 aa17.22■□□□□ 0.35
PKNOX1-209ENST00000560448 KIF1BPQ96EK5 621 aa17.22■□□□□ 0.35
PKNOX1-209ENST00000560448 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
PKNOX1-209ENST00000560448 FRAT2O75474 233 aaPredicted RBP17.21■□□□□ 0.35
PKNOX1-209ENST00000560448 GTF2IP78347 998 aa17.21■□□□□ 0.35
PKNOX1-209ENST00000560448 FSTL1Q12841 308 aa17.21■□□□□ 0.35
PKNOX1-209ENST00000560448 LDHDQ86WU2 507 aa17.21■□□□□ 0.35
PKNOX1-209ENST00000560448 ZC3H15Q8WU90 426 aaKnown RBP17.21■□□□□ 0.35
PKNOX1-209ENST00000560448 CRBNQ96SW2 442 aa17.21■□□□□ 0.35
PKNOX1-209ENST00000560448 GMLQ99445 158 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms