RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 CCDC57Q2TAC2 916 aa15.93■□□□□ 0.14
SNX1-209ENST00000559961 SLC4A10Q6U841 1118 aa15.93■□□□□ 0.14
SNX1-209ENST00000559961 MYOZ2Q9NPC6 264 aa15.93■□□□□ 0.14
SNX1-209ENST00000559961 GGA3Q9NZ52 723 aa15.93■□□□□ 0.14
SNX1-209ENST00000559961 DUOX1Q9NRD9 1551 aa15.92■□□□□ 0.14
SNX1-209ENST00000559961 AOC2O75106 756 aa15.92■□□□□ 0.14
SNX1-209ENST00000559961 CSF1RP07333 972 aa15.92■□□□□ 0.14
SNX1-209ENST00000559961 ZNF280AP59817 542 aaPredicted RBP15.92■□□□□ 0.14
SNX1-209ENST00000559961 FAM161AQ3B820 660 aa15.92■□□□□ 0.14
SNX1-209ENST00000559961 STRIP1Q5VSL9 837 aa15.92■□□□□ 0.14
SNX1-209ENST00000559961 LRRC37AA6NMS7 1700 aa15.91■□□□□ 0.14
SNX1-209ENST00000559961 ADM5C9JUS6 153 aa15.91■□□□□ 0.14
SNX1-209ENST00000559961 F6X3S4 739 aa15.91■□□□□ 0.14
SNX1-209ENST00000559961 HSPA8P11142 646 aaKnown RBP15.91■□□□□ 0.14
SNX1-209ENST00000559961 NF2P35240 595 aa15.91■□□□□ 0.14
SNX1-209ENST00000559961 ZNF157P51786 506 aaPredicted RBP15.91■□□□□ 0.14
SNX1-209ENST00000559961 BRPF1P55201 1214 aaPredicted RBP15.91■□□□□ 0.14
SNX1-209ENST00000559961 ANGEL2Q5VTE6 544 aaKnown RBP15.91■□□□□ 0.14
SNX1-209ENST00000559961 TTLL5Q6EMB2 1281 aa15.91■□□□□ 0.14
SNX1-209ENST00000559961 RGMBQ6NW40 437 aa15.91■□□□□ 0.14
SNX1-209ENST00000559961 SRCIN1Q9C0H9 1055 aa15.91■□□□□ 0.14
SNX1-209ENST00000559961 ALDH1L1O75891 902 aa15.9■□□□□ 0.14
SNX1-209ENST00000559961 CHRNDQ07001 517 aa15.9■□□□□ 0.14
SNX1-209ENST00000559961 BEND3Q5T5X7 828 aa15.9■□□□□ 0.14
SNX1-209ENST00000559961 CNNM1Q9NRU3 951 aa15.9■□□□□ 0.14
SNX1-209ENST00000559961 TAF1P21675 1872 aa15.9■□□□□ 0.14
SNX1-209ENST00000559961 GRM8O00222 908 aa15.89■□□□□ 0.13
SNX1-209ENST00000559961 EGFRP00533 1210 aa15.89■□□□□ 0.13
SNX1-209ENST00000559961 TTLL12Q14166 644 aaPredicted RBP15.89■□□□□ 0.13
SNX1-209ENST00000559961 LMBR1LQ6UX01 489 aa15.89■□□□□ 0.13
SNX1-209ENST00000559961 ZNF804AQ7Z570 1209 aa15.89■□□□□ 0.13
SNX1-209ENST00000559961 CASP7P55210 303 aa15.88■□□□□ 0.13
SNX1-209ENST00000559961 FKBP1BP68106 108 aa15.88■□□□□ 0.13
SNX1-209ENST00000559961 LDHAL6AQ6ZMR3 332 aa15.88■□□□□ 0.13
SNX1-209ENST00000559961 REM2Q8IYK8 340 aaPredicted RBP15.88■□□□□ 0.13
SNX1-209ENST00000559961 CDCA5Q96FF9 252 aa15.88■□□□□ 0.13
SNX1-209ENST00000559961 GMLQ99445 158 aa15.88■□□□□ 0.13
SNX1-209ENST00000559961 PITPNM2Q9BZ72 1349 aa15.88■□□□□ 0.13
SNX1-209ENST00000559961 E9PSI1 815 aa15.87■□□□□ 0.13
SNX1-209ENST00000559961 PLIN1O60240 522 aa15.87■□□□□ 0.13
SNX1-209ENST00000559961 GTF2IP78347 998 aa15.87■□□□□ 0.13
SNX1-209ENST00000559961 DACT2Q5SW24 774 aa15.87■□□□□ 0.13
SNX1-209ENST00000559961 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
SNX1-209ENST00000559961 ZNF609O15014 1411 aa15.85■□□□□ 0.13
SNX1-209ENST00000559961 MYO1BO43795 1136 aa15.85■□□□□ 0.13
SNX1-209ENST00000559961 TAF5LO75529 589 aa15.85■□□□□ 0.13
SNX1-209ENST00000559961 FOXO4P98177 505 aa15.85■□□□□ 0.13
SNX1-209ENST00000559961 DLGAP5Q15398 846 aa15.85■□□□□ 0.13
SNX1-209ENST00000559961 DLK2Q6UY11 383 aa15.85■□□□□ 0.13
SNX1-209ENST00000559961 APOBEC3FQ8IUX4 373 aaKnown RBP15.85■□□□□ 0.13
SNX1-209ENST00000559961 KIAA0825Q8IV33 1275 aa15.85■□□□□ 0.13
SNX1-209ENST00000559961 HELBQ8NG08 1087 aaPredicted RBP15.85■□□□□ 0.13
SNX1-209ENST00000559961 CD209Q9NNX6 404 aa15.85■□□□□ 0.13
SNX1-209ENST00000559961 PCNTO95613 3336 aa15.84■□□□□ 0.13
SNX1-209ENST00000559961 WTIPA6NIX2 430 aaPredicted RBP15.84■□□□□ 0.13
SNX1-209ENST00000559961 NBPF9Q3BBW0 867 aa15.84■□□□□ 0.13
SNX1-209ENST00000559961 TXNRD3Q86VQ6 643 aa15.84■□□□□ 0.13
SNX1-209ENST00000559961 TSKSQ9UJT2 592 aa15.84■□□□□ 0.13
SNX1-209ENST00000559961 TRPM7Q96QT4 1865 aa15.84■□□□□ 0.13
SNX1-209ENST00000559961 KIF23Q02241 960 aaPredicted RBP15.83■□□□□ 0.12
SNX1-209ENST00000559961 ARMC9Q7Z3E5 817 aa15.83■□□□□ 0.12
SNX1-209ENST00000559961 VPS37DQ86XT2 251 aa15.83■□□□□ 0.12
SNX1-209ENST00000559961 MXD3Q9BW11 206 aa15.83■□□□□ 0.12
SNX1-209ENST00000559961 ASTN2O75129 1339 aaPredicted RBP15.83■□□□□ 0.12
SNX1-209ENST00000559961 PTPRCP08575 1304 aa15.83■□□□□ 0.12
SNX1-209ENST00000559961 COL4A1P02462 1669 aa15.83■□□□□ 0.12
SNX1-209ENST00000559961 WNT10BO00744 389 aa15.82■□□□□ 0.12
SNX1-209ENST00000559961 RBM5P52756 815 aaKnown RBP eCLIP15.82■□□□□ 0.12
SNX1-209ENST00000559961 C15orf52Q6ZUT6 534 aaKnown RBP15.82■□□□□ 0.12
SNX1-209ENST00000559961 SAGE1Q9NXZ1 904 aa15.82■□□□□ 0.12
SNX1-209ENST00000559961 FRAT2O75474 233 aaPredicted RBP15.81■□□□□ 0.12
SNX1-209ENST00000559961 SASH1O94885 1247 aa15.81■□□□□ 0.12
SNX1-209ENST00000559961 UBE4AQ14139 1066 aa15.81■□□□□ 0.12
SNX1-209ENST00000559961 ABHD8Q96I13 439 aa15.81■□□□□ 0.12
SNX1-209ENST00000559961 ZNF594Q96JF6 807 aaPredicted RBP15.81■□□□□ 0.12
SNX1-209ENST00000559961 HDAC5Q9UQL6 1122 aa15.81■□□□□ 0.12
SNX1-209ENST00000559961 MROH5Q6ZUA9 1318 aa15.8■□□□□ 0.12
SNX1-209ENST00000559961 F8W031 263 aaPredicted RBP15.8■□□□□ 0.12
SNX1-209ENST00000559961 SLC10A3P09131 477 aa15.8■□□□□ 0.12
SNX1-209ENST00000559961 KLRK1P26718 216 aa15.8■□□□□ 0.12
SNX1-209ENST00000559961 HIBADHP31937 336 aaKnown RBP15.8■□□□□ 0.12
SNX1-209ENST00000559961 CAVIN4Q5BKX8 364 aa15.8■□□□□ 0.12
SNX1-209ENST00000559961 MRPL50Q8N5N7 158 aaKnown RBP15.8■□□□□ 0.12
SNX1-209ENST00000559961 CCDC85CA6NKD9 419 aa15.79■□□□□ 0.12
SNX1-209ENST00000559961 FAM155AB1AL88 458 aaPredicted RBP15.79■□□□□ 0.12
SNX1-209ENST00000559961 UBE2Q2LH0YL09 131 aa15.79■□□□□ 0.12
SNX1-209ENST00000559961 TRPA1O75762 1119 aa15.79■□□□□ 0.12
SNX1-209ENST00000559961 IL1R1P14778 569 aa15.79■□□□□ 0.12
SNX1-209ENST00000559961 FKBP1AP62942 108 aaKnown RBP15.79■□□□□ 0.12
SNX1-209ENST00000559961 PPP1R12BO60237 982 aaPredicted RBP15.78■□□□□ 0.12
SNX1-209ENST00000559961 DGKZQ13574 1117 aa15.78■□□□□ 0.12
SNX1-209ENST00000559961 ALDH1L2Q3SY69 923 aa15.78■□□□□ 0.12
SNX1-209ENST00000559961 SUPT20HL1Q3ZLR7 823 aa15.78■□□□□ 0.12
SNX1-209ENST00000559961 METTL24Q5JXM2 366 aa15.78■□□□□ 0.12
SNX1-209ENST00000559961 EPHA10Q5JZY3 1008 aa15.78■□□□□ 0.12
SNX1-209ENST00000559961 PRAMEF18Q5VWM3 479 aa15.78■□□□□ 0.12
SNX1-209ENST00000559961 SUCLG2Q96I99 432 aa15.78■□□□□ 0.12
SNX1-209ENST00000559961 SMC4Q9NTJ3 1288 aa15.78■□□□□ 0.12
SNX1-209ENST00000559961 ZNF521Q96K83 1311 aa15.77■□□□□ 0.12
SNX1-209ENST00000559961 SNAP23O00161 211 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms