RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 IFIT2P09913 472 aaKnown RBP17.64■□□□□ 0.41
SMAD6-204ENST00000559931 TNNI3KQ59H18 835 aa17.64■□□□□ 0.41
SMAD6-204ENST00000559931 CENPQQ7L2Z9 268 aaPredicted RBP17.64■□□□□ 0.41
SMAD6-204ENST00000559931 PSMD1Q99460 953 aa17.64■□□□□ 0.41
SMAD6-204ENST00000559931 GPR108Q9NPR9 543 aa17.64■□□□□ 0.41
SMAD6-204ENST00000559931 ZNF277Q9NRM2 450 aaPredicted RBP17.64■□□□□ 0.41
SMAD6-204ENST00000559931 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.64■□□□□ 0.41
SMAD6-204ENST00000559931 FPGT-TNNI3KV9GXZ4 949 aa17.64■□□□□ 0.41
SMAD6-204ENST00000559931 SBF1O95248 1867 aa17.64■□□□□ 0.41
SMAD6-204ENST00000559931 FER1L6Q2WGJ9 1857 aa17.64■□□□□ 0.41
SMAD6-204ENST00000559931 RASSF7Q02833 373 aa17.63■□□□□ 0.41
SMAD6-204ENST00000559931 VPS37DQ86XT2 251 aa17.63■□□□□ 0.41
SMAD6-204ENST00000559931 RTFDC1Q9BY42 306 aaPredicted RBP17.63■□□□□ 0.41
SMAD6-204ENST00000559931 CCDC8Q9H0W5 538 aaPredicted RBP17.63■□□□□ 0.41
SMAD6-204ENST00000559931 A0A1B0GUL6 1792 aa17.63■□□□□ 0.41
SMAD6-204ENST00000559931 NFKBIEO00221 500 aa17.62■□□□□ 0.41
SMAD6-204ENST00000559931 PPIP5K2O43314 1243 aa17.62■□□□□ 0.41
SMAD6-204ENST00000559931 FGFR2P21802 821 aa17.62■□□□□ 0.41
SMAD6-204ENST00000559931 CAVIN4Q5BKX8 364 aa17.62■□□□□ 0.41
SMAD6-204ENST00000559931 LARGE2Q8N3Y3 721 aa17.62■□□□□ 0.41
SMAD6-204ENST00000559931 EAF2Q96CJ1 260 aaPredicted RBP17.62■□□□□ 0.41
SMAD6-204ENST00000559931 KLRK1P26718 216 aa17.61■□□□□ 0.41
SMAD6-204ENST00000559931 GYG1P46976 350 aa17.61■□□□□ 0.41
SMAD6-204ENST00000559931 AOC3Q16853 763 aa17.61■□□□□ 0.41
SMAD6-204ENST00000559931 XAGE2Q96GT9 111 aa17.61■□□□□ 0.41
SMAD6-204ENST00000559931 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
SMAD6-204ENST00000559931 ADORA1P30542 326 aa17.6■□□□□ 0.41
SMAD6-204ENST00000559931 HIBADHP31937 336 aaKnown RBP17.6■□□□□ 0.41
SMAD6-204ENST00000559931 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
SMAD6-204ENST00000559931 NUCB1Q02818 461 aa17.6■□□□□ 0.41
SMAD6-204ENST00000559931 DOK7Q18PE1 504 aa17.6■□□□□ 0.41
SMAD6-204ENST00000559931 ZNF804AQ7Z570 1209 aa17.6■□□□□ 0.41
SMAD6-204ENST00000559931 TXNRD3Q86VQ6 643 aa17.6■□□□□ 0.41
SMAD6-204ENST00000559931 CHD1LQ86WJ1 897 aa17.6■□□□□ 0.41
SMAD6-204ENST00000559931 KDM2BQ8NHM5 1336 aa17.59■□□□□ 0.41
SMAD6-204ENST00000559931 LTBP3Q9NS15 1303 aa17.59■□□□□ 0.41
SMAD6-204ENST00000559931 FRAT2O75474 233 aaPredicted RBP17.59■□□□□ 0.41
SMAD6-204ENST00000559931 BCAMP50895 628 aa17.59■□□□□ 0.41
SMAD6-204ENST00000559931 KIAA2012Q0VF49 1180 aa17.59■□□□□ 0.41
SMAD6-204ENST00000559931 CCDC158Q5M9N0 1113 aa17.59■□□□□ 0.41
SMAD6-204ENST00000559931 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
SMAD6-204ENST00000559931 JDP2Q8WYK2 163 aa17.59■□□□□ 0.41
SMAD6-204ENST00000559931 FAM84BQ96KN1 310 aaPredicted RBP17.59■□□□□ 0.41
SMAD6-204ENST00000559931 DBNDD2Q9BQY9 259 aa17.59■□□□□ 0.41
SMAD6-204ENST00000559931 VPS33BQ9H267 617 aa17.59■□□□□ 0.41
SMAD6-204ENST00000559931 GNL3LQ9NVN8 582 aaKnown RBP17.59■□□□□ 0.41
SMAD6-204ENST00000559931 LTBP1Q14766 1721 aa17.58■□□□□ 0.41
SMAD6-204ENST00000559931 ZNF609O15014 1411 aa17.58■□□□□ 0.41
SMAD6-204ENST00000559931 SNED1Q8TER0 1413 aa17.58■□□□□ 0.41
SMAD6-204ENST00000559931 MED23Q9ULK4 1368 aa17.58■□□□□ 0.4
SMAD6-204ENST00000559931 LMNB1P20700 586 aa17.58■□□□□ 0.4
SMAD6-204ENST00000559931 C15orf52Q6ZUT6 534 aaKnown RBP17.58■□□□□ 0.4
SMAD6-204ENST00000559931 NIM1KQ8IY84 436 aa17.58■□□□□ 0.4
SMAD6-204ENST00000559931 DUOX1Q9NRD9 1551 aa17.57■□□□□ 0.4
SMAD6-204ENST00000559931 YY1P25490 414 aa17.57■□□□□ 0.4
SMAD6-204ENST00000559931 PRELPP51888 382 aa17.57■□□□□ 0.4
SMAD6-204ENST00000559931 TTC39AQ5SRH9 613 aa17.57■□□□□ 0.4
SMAD6-204ENST00000559931 C9orf131Q5VYM1 1079 aa17.57■□□□□ 0.4
SMAD6-204ENST00000559931 FBXO33Q7Z6M2 555 aa17.57■□□□□ 0.4
SMAD6-204ENST00000559931 GPATCH3Q96I76 525 aa17.57■□□□□ 0.4
SMAD6-204ENST00000559931 COA1Q9GZY4 146 aa17.57■□□□□ 0.4
SMAD6-204ENST00000559931 DBNDD1Q9H9R9 158 aa17.57■□□□□ 0.4
SMAD6-204ENST00000559931 TLR7Q9NYK1 1049 aaKnown RBP17.57■□□□□ 0.4
SMAD6-204ENST00000559931 RNF181Q9P0P0 153 aa17.57■□□□□ 0.4
SMAD6-204ENST00000559931 DBNLQ9UJU6 430 aaKnown RBP17.57■□□□□ 0.4
SMAD6-204ENST00000559931 CCDC102BQ68D86 513 aa17.56■□□□□ 0.4
SMAD6-204ENST00000559931 IQSEC3Q9UPP2 1182 aaPredicted RBP17.56■□□□□ 0.4
SMAD6-204ENST00000559931 DICER1Q9UPY3 1922 aaKnown RBP17.56■□□□□ 0.4
SMAD6-204ENST00000559931 ECE2O60344 883 aa17.55■□□□□ 0.4
SMAD6-204ENST00000559931 PHKA1P46020 1223 aa17.55■□□□□ 0.4
SMAD6-204ENST00000559931 FBXW7Q969H0 707 aa17.55■□□□□ 0.4
SMAD6-204ENST00000559931 CD209Q9NNX6 404 aa17.55■□□□□ 0.4
SMAD6-204ENST00000559931 IRS2Q9Y4H2 1338 aa17.54■□□□□ 0.4
SMAD6-204ENST00000559931 UQCRFS1P1P0C7P4 283 aa17.54■□□□□ 0.4
SMAD6-204ENST00000559931 PODNQ7Z5L7 613 aa17.54■□□□□ 0.4
SMAD6-204ENST00000559931 OTUD7AQ8TE49 926 aaPredicted RBP17.54■□□□□ 0.4
SMAD6-204ENST00000559931 ZNRF3Q9ULT6 936 aa17.54■□□□□ 0.4
SMAD6-204ENST00000559931 MX1P20591 662 aa17.53■□□□□ 0.4
SMAD6-204ENST00000559931 ECHDC1Q9NTX5 307 aa17.53■□□□□ 0.4
SMAD6-204ENST00000559931 ARAP2Q8WZ64 1704 aa17.52■□□□□ 0.4
SMAD6-204ENST00000559931 EIF6P56537 245 aaKnown RBP17.52■□□□□ 0.4
SMAD6-204ENST00000559931 CHAF1AQ13111 956 aaPredicted RBP17.52■□□□□ 0.4
SMAD6-204ENST00000559931 TDRD7Q8NHU6 1098 aaKnown RBP17.52■□□□□ 0.4
SMAD6-204ENST00000559931 ERC2O15083 957 aa17.51■□□□□ 0.39
SMAD6-204ENST00000559931 RAD17O75943 681 aa17.51■□□□□ 0.39
SMAD6-204ENST00000559931 IL1R1P14778 569 aa17.51■□□□□ 0.39
SMAD6-204ENST00000559931 GTF2IP78347 998 aa17.51■□□□□ 0.39
SMAD6-204ENST00000559931 TSHZ3Q63HK5 1081 aa17.51■□□□□ 0.39
SMAD6-204ENST00000559931 KCNQ5Q9NR82 932 aa17.51■□□□□ 0.39
SMAD6-204ENST00000559931 SNRKQ9NRH2 765 aa17.51■□□□□ 0.39
SMAD6-204ENST00000559931 DENND2AQ9ULE3 1009 aa17.51■□□□□ 0.39
SMAD6-204ENST00000559931 JAG2Q9Y219 1238 aa17.51■□□□□ 0.39
SMAD6-204ENST00000559931 TIAM2Q8IVF5 1701 aa17.5■□□□□ 0.39
SMAD6-204ENST00000559931 SEMA3EO15041 775 aa17.5■□□□□ 0.39
SMAD6-204ENST00000559931 ARID4AP29374 1257 aaPredicted RBP17.5■□□□□ 0.39
SMAD6-204ENST00000559931 TTLL5Q6EMB2 1281 aa17.5■□□□□ 0.39
SMAD6-204ENST00000559931 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
SMAD6-204ENST00000559931 MYH13Q9UKX3 1938 aa17.5■□□□□ 0.39
SMAD6-204ENST00000559931 TTC41PQ6P2S7 1318 aa17.49■□□□□ 0.39
SMAD6-204ENST00000559931 USP17L3A6NCW0 530 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms