RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 GPR101Q96P66 508 aaPredicted RBP12.76□□□□□ -0.37
TPM1-221ENST00000559831 STAP2Q9UGK3 403 aa12.76□□□□□ -0.37
TPM1-221ENST00000559831 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
TPM1-221ENST00000559831 AOX1Q06278 1338 aa12.76□□□□□ -0.37
TPM1-221ENST00000559831 TTC41PQ6P2S7 1318 aa12.76□□□□□ -0.37
TPM1-221ENST00000559831 ARFGEF1Q9Y6D6 1849 aa12.76□□□□□ -0.37
TPM1-221ENST00000559831 C6orf229H3BNL8 230 aa12.75□□□□□ -0.37
TPM1-221ENST00000559831 C21orf2O43822 256 aa12.75□□□□□ -0.37
TPM1-221ENST00000559831 KLRK1P26718 216 aa12.75□□□□□ -0.37
TPM1-221ENST00000559831 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
TPM1-221ENST00000559831 TTC22Q5TAA0 569 aa12.75□□□□□ -0.37
TPM1-221ENST00000559831 DPP8Q6V1X1 898 aaPredicted RBP12.75□□□□□ -0.37
TPM1-221ENST00000559831 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
TPM1-221ENST00000559831 OSBPL3Q9H4L5 887 aa12.75□□□□□ -0.37
TPM1-221ENST00000559831 AKAP11Q9UKA4 1901 aa12.75□□□□□ -0.37
TPM1-221ENST00000559831 DUOX1Q9NRD9 1551 aa12.74□□□□□ -0.37
TPM1-221ENST00000559831 GLRX3O76003 335 aaKnown RBP12.74□□□□□ -0.37
TPM1-221ENST00000559831 MAP4K4O95819 1239 aaPredicted RBP12.74□□□□□ -0.37
TPM1-221ENST00000559831 PHKA1P46020 1223 aa12.74□□□□□ -0.37
TPM1-221ENST00000559831 GYG1P46976 350 aa12.74□□□□□ -0.37
TPM1-221ENST00000559831 VPS37DQ86XT2 251 aa12.74□□□□□ -0.37
TPM1-221ENST00000559831 TBC1D16Q8TBP0 767 aa12.74□□□□□ -0.37
TPM1-221ENST00000559831 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
TPM1-221ENST00000559831 BOLA2Q9H3K6 86 aa12.74□□□□□ -0.37
TPM1-221ENST00000559831 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
TPM1-221ENST00000559831 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
TPM1-221ENST00000559831 ATP5JP18859 108 aa12.73□□□□□ -0.37
TPM1-221ENST00000559831 BCAMP50895 628 aa12.73□□□□□ -0.37
TPM1-221ENST00000559831 CCDC93Q567U6 631 aa12.73□□□□□ -0.37
TPM1-221ENST00000559831 CAVIN4Q5BKX8 364 aa12.73□□□□□ -0.37
TPM1-221ENST00000559831 CCDC102BQ68D86 513 aa12.73□□□□□ -0.37
TPM1-221ENST00000559831 CC2D2BQ6DHV5 1058 aa12.73□□□□□ -0.37
TPM1-221ENST00000559831 C7orf43Q8WVR3 580 aa12.73□□□□□ -0.37
TPM1-221ENST00000559831 DNAJC2Q99543 621 aaKnown RBP12.73□□□□□ -0.37
TPM1-221ENST00000559831 POLLQ9UGP5 575 aa12.73□□□□□ -0.37
TPM1-221ENST00000559831 FER1L6Q2WGJ9 1857 aa12.73□□□□□ -0.37
TPM1-221ENST00000559831 MYH7P12883 1935 aa12.72□□□□□ -0.37
TPM1-221ENST00000559831 MYO5AQ9Y4I1 1855 aaKnown RBP12.72□□□□□ -0.37
TPM1-221ENST00000559831 TRIM6-TRIM34B2RNG4 842 aa12.72□□□□□ -0.37
TPM1-221ENST00000559831 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
TPM1-221ENST00000559831 UQCRFS1P1P0C7P4 283 aa12.72□□□□□ -0.37
TPM1-221ENST00000559831 GSPT1P15170 499 aaKnown RBP12.72□□□□□ -0.37
TPM1-221ENST00000559831 TXNRD3Q86VQ6 643 aa12.72□□□□□ -0.37
TPM1-221ENST00000559831 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
TPM1-221ENST00000559831 RILPL2Q969X0 211 aa12.72□□□□□ -0.37
TPM1-221ENST00000559831 GNL3LQ9NVN8 582 aaKnown RBP12.72□□□□□ -0.37
TPM1-221ENST00000559831 MED23Q9ULK4 1368 aa12.71□□□□□ -0.37
TPM1-221ENST00000559831 CHD4Q14839 1912 aa12.71□□□□□ -0.37
TPM1-221ENST00000559831 HIBADHP31937 336 aaKnown RBP12.71□□□□□ -0.37
TPM1-221ENST00000559831 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.37
TPM1-221ENST00000559831 SOGA3Q5TF21 947 aa12.71□□□□□ -0.37
TPM1-221ENST00000559831 ZNF804AQ7Z570 1209 aa12.71□□□□□ -0.37
TPM1-221ENST00000559831 FAM84BQ96KN1 310 aaPredicted RBP12.71□□□□□ -0.37
TPM1-221ENST00000559831 EYA3Q99504 573 aa12.71□□□□□ -0.37
TPM1-221ENST00000559831 SYT17Q9BSW7 474 aa12.71□□□□□ -0.37
TPM1-221ENST00000559831 SNRKQ9NRH2 765 aa12.71□□□□□ -0.37
TPM1-221ENST00000559831 IQSEC3Q9UPP2 1182 aaPredicted RBP12.71□□□□□ -0.37
TPM1-221ENST00000559831 NDUFB9Q9Y6M9 179 aa12.71□□□□□ -0.37
TPM1-221ENST00000559831 CCDC88AQ3V6T2 1871 aa12.71□□□□□ -0.37
TPM1-221ENST00000559831 IRS2Q9Y4H2 1338 aa12.7□□□□□ -0.38
TPM1-221ENST00000559831 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
TPM1-221ENST00000559831 SDSP20132 328 aa12.7□□□□□ -0.38
TPM1-221ENST00000559831 ARID4AP29374 1257 aaPredicted RBP12.7□□□□□ -0.38
TPM1-221ENST00000559831 MCAMP43121 646 aa12.7□□□□□ -0.38
TPM1-221ENST00000559831 FKBP4Q02790 459 aaKnown RBP eCLIP12.7□□□□□ -0.38
TPM1-221ENST00000559831 SCARF1Q14162 830 aa12.7□□□□□ -0.38
TPM1-221ENST00000559831 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
TPM1-221ENST00000559831 RTKN2Q8IZC4 609 aa12.7□□□□□ -0.38
TPM1-221ENST00000559831 CNTROBQ8N137 903 aa12.7□□□□□ -0.38
TPM1-221ENST00000559831 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.7□□□□□ -0.38
TPM1-221ENST00000559831 HAUS7Q99871 368 aa12.7□□□□□ -0.38
TPM1-221ENST00000559831 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
TPM1-221ENST00000559831 G3V3G9 751 aa12.69□□□□□ -0.38
TPM1-221ENST00000559831 GOLIM4O00461 696 aa12.69□□□□□ -0.38
TPM1-221ENST00000559831 WASHC4Q2M389 1173 aa12.69□□□□□ -0.38
TPM1-221ENST00000559831 GRIPAP1Q4V328 841 aa12.69□□□□□ -0.38
TPM1-221ENST00000559831 DCAF8Q5TAQ9 597 aa12.69□□□□□ -0.38
TPM1-221ENST00000559831 PI16Q6UXB8 463 aa12.69□□□□□ -0.38
TPM1-221ENST00000559831 C15orf52Q6ZUT6 534 aaKnown RBP12.69□□□□□ -0.38
TPM1-221ENST00000559831 SUPT20HQ8NEM7 779 aa12.69□□□□□ -0.38
TPM1-221ENST00000559831 EDC3Q96F86 508 aaKnown RBP12.69□□□□□ -0.38
TPM1-221ENST00000559831 ZC3H12CQ9C0D7 883 aaKnown RBP12.69□□□□□ -0.38
TPM1-221ENST00000559831 DOCK2Q92608 1830 aa12.68□□□□□ -0.38
TPM1-221ENST00000559831 ZAP70P43403 619 aa12.68□□□□□ -0.38
TPM1-221ENST00000559831 CHAF1AQ13111 956 aaPredicted RBP12.68□□□□□ -0.38
TPM1-221ENST00000559831 RASGRF1Q13972 1273 aa12.68□□□□□ -0.38
TPM1-221ENST00000559831 DOK7Q18PE1 504 aa12.68□□□□□ -0.38
TPM1-221ENST00000559831 SPATA5Q8NB90 893 aa12.68□□□□□ -0.38
TPM1-221ENST00000559831 ZNF512BQ96KM6 892 aaPredicted RBP12.68□□□□□ -0.38
TPM1-221ENST00000559831 RTFDC1Q9BY42 306 aaPredicted RBP12.68□□□□□ -0.38
TPM1-221ENST00000559831 PAG1Q9NWQ8 432 aa12.68□□□□□ -0.38
TPM1-221ENST00000559831 HMG20BQ9P0W2 317 aa12.68□□□□□ -0.38
TPM1-221ENST00000559831 COL1A1P02452 1464 aaPredicted RBP12.67□□□□□ -0.38
TPM1-221ENST00000559831 PPIP5K2O43314 1243 aa12.67□□□□□ -0.38
TPM1-221ENST00000559831 AOC3Q16853 763 aa12.67□□□□□ -0.38
TPM1-221ENST00000559831 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
TPM1-221ENST00000559831 PSMD1Q99460 953 aa12.67□□□□□ -0.38
TPM1-221ENST00000559831 FSD1Q9BTV5 496 aa12.67□□□□□ -0.38
TPM1-221ENST00000559831 CD209Q9NNX6 404 aa12.67□□□□□ -0.38
TPM1-221ENST00000559831 ZNF277Q9NRM2 450 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms