RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 CNKSR1Q969H4 720 aa10.82□□□□□ -0.68
CTDSPL2-208ENST00000559793 EMID1Q96A84 441 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL2-208ENST00000559793 USP16Q9Y5T5 823 aa10.82□□□□□ -0.68
CTDSPL2-208ENST00000559793 SIPA1L3O60292 1781 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL2-208ENST00000559793 LTBP3Q9NS15 1303 aa10.82□□□□□ -0.68
CTDSPL2-208ENST00000559793 CACNA1SQ13698 1873 aa10.81□□□□□ -0.68
CTDSPL2-208ENST00000559793 U2SURPO15042 1029 aaKnown RBP10.81□□□□□ -0.68
CTDSPL2-208ENST00000559793 DXOO77932 396 aaKnown RBP10.81□□□□□ -0.68
CTDSPL2-208ENST00000559793 TUSC1Q2TAM9 212 aa10.81□□□□□ -0.68
CTDSPL2-208ENST00000559793 PLA2G2CQ5R387 149 aa10.81□□□□□ -0.68
CTDSPL2-208ENST00000559793 STYK1Q6J9G0 422 aa10.81□□□□□ -0.68
CTDSPL2-208ENST00000559793 C7orf43Q8WVR3 580 aa10.81□□□□□ -0.68
CTDSPL2-208ENST00000559793 FMNL2Q96PY5 1086 aa10.81□□□□□ -0.68
CTDSPL2-208ENST00000559793 TAOK3Q9H2K8 898 aa10.81□□□□□ -0.68
CTDSPL2-208ENST00000559793 LIMD1Q9UGP4 676 aa10.81□□□□□ -0.68
CTDSPL2-208ENST00000559793 MKRN1Q9UHC7 482 aaKnown RBP10.81□□□□□ -0.68
CTDSPL2-208ENST00000559793 PIP4K2AP48426 406 aaPredicted RBP10.8□□□□□ -0.68
CTDSPL2-208ENST00000559793 MTMR2Q13614 643 aa10.8□□□□□ -0.68
CTDSPL2-208ENST00000559793 PRPF40BQ6NWY9 871 aaKnown RBP10.8□□□□□ -0.68
CTDSPL2-208ENST00000559793 CNBD1Q8NA66 436 aa10.8□□□□□ -0.68
CTDSPL2-208ENST00000559793 GAS2L2Q8NHY3 880 aa10.8□□□□□ -0.68
CTDSPL2-208ENST00000559793 MASTLQ96GX5 879 aa10.8□□□□□ -0.68
CTDSPL2-208ENST00000559793 PHACTR3Q96KR7 559 aa10.8□□□□□ -0.68
CTDSPL2-208ENST00000559793 FCF1Q9Y324 198 aaKnown RBP10.8□□□□□ -0.68
CTDSPL2-208ENST00000559793 SCN7AQ01118 1682 aa10.79□□□□□ -0.68
CTDSPL2-208ENST00000559793 PRAMEF22A3QJZ6 481 aa10.79□□□□□ -0.68
CTDSPL2-208ENST00000559793 SPDYE5A6NIY4 337 aa10.79□□□□□ -0.68
CTDSPL2-208ENST00000559793 BTBD11A6QL63 1104 aa10.79□□□□□ -0.68
CTDSPL2-208ENST00000559793 SLC19A1P41440 591 aa10.79□□□□□ -0.68
CTDSPL2-208ENST00000559793 CNGB1Q14028 1251 aaPredicted RBP10.79□□□□□ -0.68
CTDSPL2-208ENST00000559793 DZIP3Q86Y13 1208 aaKnown RBP10.79□□□□□ -0.68
CTDSPL2-208ENST00000559793 COL3A1P02461 1466 aaPredicted RBP10.79□□□□□ -0.68
CTDSPL2-208ENST00000559793 CEMIPQ8WUJ3 1361 aa10.78□□□□□ -0.68
CTDSPL2-208ENST00000559793 KLRG2A4D1S0 409 aaPredicted RBP10.78□□□□□ -0.68
CTDSPL2-208ENST00000559793 NPHP1O15259 732 aa10.78□□□□□ -0.68
CTDSPL2-208ENST00000559793 JUNDP17535 347 aa10.78□□□□□ -0.68
CTDSPL2-208ENST00000559793 ST5P78524 1137 aa10.78□□□□□ -0.68
CTDSPL2-208ENST00000559793 PRPF38BQ5VTL8 546 aaKnown RBP10.78□□□□□ -0.68
CTDSPL2-208ENST00000559793 LIAT1Q6ZQX7 453 aa10.78□□□□□ -0.68
CTDSPL2-208ENST00000559793 NPM2Q86SE8 214 aaKnown RBP10.78□□□□□ -0.68
CTDSPL2-208ENST00000559793 TAF1DQ9H5J8 278 aaPredicted RBP10.78□□□□□ -0.68
CTDSPL2-208ENST00000559793 PASKQ96RG2 1323 aa10.78□□□□□ -0.68
CTDSPL2-208ENST00000559793 ARFGEF2Q9Y6D5 1785 aa10.77□□□□□ -0.68
CTDSPL2-208ENST00000559793 SCN4AP35499 1836 aa10.77□□□□□ -0.68
CTDSPL2-208ENST00000559793 FOXN1O15353 648 aa10.77□□□□□ -0.69
CTDSPL2-208ENST00000559793 CLK2P49760 499 aaKnown RBP10.77□□□□□ -0.69
CTDSPL2-208ENST00000559793 SOGA3Q5TF21 947 aa10.77□□□□□ -0.69
CTDSPL2-208ENST00000559793 OLFM4Q6UX06 510 aa10.77□□□□□ -0.69
CTDSPL2-208ENST00000559793 CLEC4GQ6UXB4 293 aa10.77□□□□□ -0.69
CTDSPL2-208ENST00000559793 CCER1Q8TC90 406 aaPredicted RBP10.77□□□□□ -0.69
CTDSPL2-208ENST00000559793 ZBTB3Q9H5J0 574 aa10.77□□□□□ -0.69
CTDSPL2-208ENST00000559793 POLR3EQ9NVU0 708 aa10.77□□□□□ -0.69
CTDSPL2-208ENST00000559793 BCORQ6W2J9 1755 aa10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 IQCA1LA6NCM1 817 aa10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 NPR1P16066 1061 aa10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 VEGFBP49765 207 aa10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 SKIV2LQ15477 1246 aaKnown RBP10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 CSPP1Q1MSJ5 1256 aa10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 SH3D19Q5HYK7 790 aa10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 NBPF10Q6P3W6 841 aaKnown RBP10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 LDHDQ86WU2 507 aa10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 NBPF5PQ86XG9 351 aaPredicted RBP10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 NBPF15Q8N660 670 aa10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 PRR7Q8TB68 274 aa10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 ZNF277Q9NRM2 450 aaPredicted RBP10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 CNTNAP1P78357 1384 aa10.76□□□□□ -0.69
CTDSPL2-208ENST00000559793 LILRB3O75022 631 aa10.75□□□□□ -0.69
CTDSPL2-208ENST00000559793 SNRPA1P09661 255 aaKnown RBP10.75□□□□□ -0.69
CTDSPL2-208ENST00000559793 PRKAR2BP31323 418 aa10.75□□□□□ -0.69
CTDSPL2-208ENST00000559793 FKBP4Q02790 459 aaKnown RBP eCLIP10.75□□□□□ -0.69
CTDSPL2-208ENST00000559793 CCDC93Q567U6 631 aa10.75□□□□□ -0.69
CTDSPL2-208ENST00000559793 TPTE2Q6XPS3 522 aa10.75□□□□□ -0.69
CTDSPL2-208ENST00000559793 NPC1L1Q9UHC9 1359 aa10.75□□□□□ -0.69
CTDSPL2-208ENST00000559793 TMEM88BA6NKF7 163 aa10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 FAM177BA6PVY3 158 aa10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 HLFQ16534 295 aa10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 QPCTQ16769 361 aa10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 EAPPQ56P03 285 aaPredicted RBP10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 SPRYD7Q5W111 196 aa10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 MCM10Q7L590 875 aa10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 SYNE4Q8N205 404 aa10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 PRDM10Q9NQV6 1147 aa10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 NIP7Q9Y221 180 aaKnown RBP eCLIP10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 ZNF652Q9Y2D9 606 aa10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 ZNF541Q9H0D2 1346 aa10.74□□□□□ -0.69
CTDSPL2-208ENST00000559793 FZD9O00144 591 aa10.73□□□□□ -0.69
CTDSPL2-208ENST00000559793 EPHX2P34913 555 aa10.73□□□□□ -0.69
CTDSPL2-208ENST00000559793 RPIAP49247 311 aa10.73□□□□□ -0.69
CTDSPL2-208ENST00000559793 DCTN1Q14203 1278 aa10.73□□□□□ -0.69
CTDSPL2-208ENST00000559793 DESI1Q6ICB0 168 aa10.73□□□□□ -0.69
CTDSPL2-208ENST00000559793 RTKN2Q8IZC4 609 aa10.73□□□□□ -0.69
CTDSPL2-208ENST00000559793 HACL1Q9UJ83 578 aa10.73□□□□□ -0.69
CTDSPL2-208ENST00000559793 CFAP99D6REC4 459 aa10.72□□□□□ -0.69
CTDSPL2-208ENST00000559793 ALDH1B1P30837 517 aa10.72□□□□□ -0.69
CTDSPL2-208ENST00000559793 IARSP41252 1262 aaKnown RBP10.72□□□□□ -0.69
CTDSPL2-208ENST00000559793 CTCFP49711 727 aaPredicted RBP10.72□□□□□ -0.69
CTDSPL2-208ENST00000559793 MAP1SQ66K74 1059 aaPredicted RBP10.72□□□□□ -0.69
CTDSPL2-208ENST00000559793 CNTROBQ8N137 903 aa10.72□□□□□ -0.69
CTDSPL2-208ENST00000559793 IL27Q8NEV9 243 aa10.72□□□□□ -0.69
CTDSPL2-208ENST00000559793 RTF1Q92541 710 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms