RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 EHHADHQ08426 723 aa7.9□□□□□ -1.14
CTDSPL2-207ENST00000559738 CEP135Q66GS9 1140 aa7.9□□□□□ -1.14
CTDSPL2-207ENST00000559738 IGF2-ASQ6U949 168 aa7.9□□□□□ -1.14
CTDSPL2-207ENST00000559738 TP53INP1Q96A56 240 aa7.9□□□□□ -1.14
CTDSPL2-207ENST00000559738 BRPF3Q9ULD4 1205 aa7.9□□□□□ -1.14
CTDSPL2-207ENST00000559738 NOS3P29474 1203 aa7.89□□□□□ -1.15
CTDSPL2-207ENST00000559738 IREB2P48200 963 aaKnown RBP7.89□□□□□ -1.15
CTDSPL2-207ENST00000559738 SNX29Q8TEQ0 813 aa7.89□□□□□ -1.15
CTDSPL2-207ENST00000559738 WFDC12Q8WWY7 111 aa7.89□□□□□ -1.15
CTDSPL2-207ENST00000559738 PBX4Q9BYU1 374 aa7.89□□□□□ -1.15
CTDSPL2-207ENST00000559738 LACRTQ9GZZ8 138 aa7.89□□□□□ -1.15
CTDSPL2-207ENST00000559738 NFKBIEO00221 500 aa7.88□□□□□ -1.15
CTDSPL2-207ENST00000559738 PHACTR2O75167 634 aa7.88□□□□□ -1.15
CTDSPL2-207ENST00000559738 TRPA1O75762 1119 aa7.88□□□□□ -1.15
CTDSPL2-207ENST00000559738 SMNDC1O75940 238 aaKnown RBP eCLIP7.88□□□□□ -1.15
CTDSPL2-207ENST00000559738 SETDB1Q15047 1291 aa7.88□□□□□ -1.15
CTDSPL2-207ENST00000559738 Q8N3U1 123 aa7.88□□□□□ -1.15
CTDSPL2-207ENST00000559738 HHIPQ96QV1 700 aa7.88□□□□□ -1.15
CTDSPL2-207ENST00000559738 POP1Q99575 1024 aaKnown RBP7.88□□□□□ -1.15
CTDSPL2-207ENST00000559738 SSBP4Q9BWG4 385 aaPredicted RBP7.88□□□□□ -1.15
CTDSPL2-207ENST00000559738 PPME1Q9Y570 386 aa7.88□□□□□ -1.15
CTDSPL2-207ENST00000559738 IGHA2P01877 340 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 H2AFB1P0C5Y9 115 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 H2AFB2P0C5Z0 115 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 ZMYM1Q5SVZ6 1142 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 TXNDC11Q6PKC3 985 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 MAP4K3Q8IVH8 894 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 CACTIN-AS1Q8N1I8 211 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 PMEPA1Q969W9 287 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 FAM129BQ96TA1 746 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 TRAIPQ9BWF2 469 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 ZFYVE28Q9HCC9 887 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 SRA1Q9HD15 236 aaKnown RBP7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 DZANK1Q9NVP4 752 aa7.87□□□□□ -1.15
CTDSPL2-207ENST00000559738 LINC01387J3KSC0 135 aa7.86□□□□□ -1.15
CTDSPL2-207ENST00000559738 NDUFB5O43674 189 aa7.86□□□□□ -1.15
CTDSPL2-207ENST00000559738 PRSS36Q5K4E3 855 aa7.86□□□□□ -1.15
CTDSPL2-207ENST00000559738 MEGF10Q96KG7 1140 aa7.86□□□□□ -1.15
CTDSPL2-207ENST00000559738 MUC3BQ9H195 1237 aa7.86□□□□□ -1.15
CTDSPL2-207ENST00000559738 POLR3DP05423 398 aaPredicted RBP7.85□□□□□ -1.15
CTDSPL2-207ENST00000559738 CDC25BP30305 580 aa7.85□□□□□ -1.15
CTDSPL2-207ENST00000559738 PEAR1Q5VY43 1037 aaPredicted RBP7.85□□□□□ -1.15
CTDSPL2-207ENST00000559738 DCAF11Q8TEB1 546 aa7.85□□□□□ -1.15
CTDSPL2-207ENST00000559738 MRPL18Q9H0U6 180 aaKnown RBP7.85□□□□□ -1.15
CTDSPL2-207ENST00000559738 AKTIPQ9H8T0 292 aa7.85□□□□□ -1.15
CTDSPL2-207ENST00000559738 LATS2Q9NRM7 1088 aa7.85□□□□□ -1.15
CTDSPL2-207ENST00000559738 GPR182O15218 404 aa7.84□□□□□ -1.15
CTDSPL2-207ENST00000559738 ALX3O95076 343 aa7.84□□□□□ -1.15
CTDSPL2-207ENST00000559738 CDC27P30260 824 aa7.84□□□□□ -1.15
CTDSPL2-207ENST00000559738 GALNT11Q8NCW6 608 aa7.84□□□□□ -1.15
CTDSPL2-207ENST00000559738 ZKSCAN3Q9BRR0 538 aa7.84□□□□□ -1.15
CTDSPL2-207ENST00000559738 CARD10Q9BWT7 1032 aa7.84□□□□□ -1.15
CTDSPL2-207ENST00000559738 ADAM19Q9H013 955 aa7.84□□□□□ -1.15
CTDSPL2-207ENST00000559738 SH2B1Q9NRF2 756 aaPredicted RBP7.84□□□□□ -1.15
CTDSPL2-207ENST00000559738 AMOTL2Q9Y2J4 779 aa7.84□□□□□ -1.15
CTDSPL2-207ENST00000559738 IVNS1ABPQ9Y6Y0 642 aa7.84□□□□□ -1.15
CTDSPL2-207ENST00000559738 F8W735 103 aaPredicted RBP7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 PDE2AO00408 941 aaPredicted RBP7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 TM4SF5O14894 197 aa7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 EPHA1P21709 976 aa7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 KCNA1Q09470 495 aa7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 ORC1Q13415 861 aa7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 FOXD4L6Q3SYB3 417 aaPredicted RBP7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 USPL1Q5W0Q7 1092 aa7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 FOXD4L3Q6VB84 417 aaPredicted RBP7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 AGGF1Q8N302 714 aaeCLIP7.83□□□□□ -1.164e-10■■■■□ 25.4
CTDSPL2-207ENST00000559738 CITED4Q96RK1 184 aa7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 OSMRQ99650 979 aa7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 BIN2Q9UBW5 565 aaPredicted RBP7.83□□□□□ -1.16
CTDSPL2-207ENST00000559738 EDN3P14138 238 aa7.82□□□□□ -1.16
CTDSPL2-207ENST00000559738 PTPRAP18433 802 aa7.82□□□□□ -1.16
CTDSPL2-207ENST00000559738 PDE3BQ13370 1112 aa7.82□□□□□ -1.16
CTDSPL2-207ENST00000559738 TMEM102Q8N9M5 508 aaPredicted RBP7.82□□□□□ -1.16
CTDSPL2-207ENST00000559738 NXPE3Q969Y0 559 aa7.82□□□□□ -1.16
CTDSPL2-207ENST00000559738 RBCK1Q9BYM8 510 aa7.82□□□□□ -1.16
CTDSPL2-207ENST00000559738 KRTAP4-8Q9BYQ9 185 aa7.82□□□□□ -1.16
CTDSPL2-207ENST00000559738 SCO2A0A1W2PP80 73 aa7.81□□□□□ -1.16
CTDSPL2-207ENST00000559738 FAM177BA6PVY3 158 aa7.81□□□□□ -1.16
CTDSPL2-207ENST00000559738 TMEM130Q8N3G9 435 aa7.81□□□□□ -1.16
CTDSPL2-207ENST00000559738 WISP1O95388 367 aa7.8□□□□□ -1.16
CTDSPL2-207ENST00000559738 CD68P34810 354 aaPredicted RBP7.8□□□□□ -1.16
CTDSPL2-207ENST00000559738 FAM117BQ6P1L5 589 aa7.8□□□□□ -1.16
CTDSPL2-207ENST00000559738 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.8□□□□□ -1.16
CTDSPL2-207ENST00000559738 TMC7Q7Z402 723 aa7.8□□□□□ -1.16
CTDSPL2-207ENST00000559738 GALNT12Q8IXK2 581 aa7.8□□□□□ -1.16
CTDSPL2-207ENST00000559738 DZIP1LQ8IYY4 767 aaKnown RBP7.8□□□□□ -1.16
CTDSPL2-207ENST00000559738 TMC1Q8TDI8 760 aa7.8□□□□□ -1.16
CTDSPL2-207ENST00000559738 NIF3L1Q9GZT8 377 aa7.8□□□□□ -1.16
CTDSPL2-207ENST00000559738 SOX13Q9UN79 622 aa7.8□□□□□ -1.16
CTDSPL2-207ENST00000559738 FSCN2O14926 492 aa7.79□□□□□ -1.16
CTDSPL2-207ENST00000559738 GLB1P16278 677 aa7.79□□□□□ -1.16
CTDSPL2-207ENST00000559738 ACAD11Q709F0 780 aa7.79□□□□□ -1.16
CTDSPL2-207ENST00000559738 BHLHE41Q9C0J9 482 aaPredicted RBP7.79□□□□□ -1.16
CTDSPL2-207ENST00000559738 KCNK4Q9NYG8 393 aa7.79□□□□□ -1.16
CTDSPL2-207ENST00000559738 DCTN4Q9UJW0 460 aa7.79□□□□□ -1.16
CTDSPL2-207ENST00000559738 A0A1W2PP55 124 aa7.78□□□□□ -1.16
CTDSPL2-207ENST00000559738 METTL12A8MUP2 240 aa7.78□□□□□ -1.16
CTDSPL2-207ENST00000559738 H3BRJ5 948 aa7.78□□□□□ -1.16
CTDSPL2-207ENST00000559738 EIF1AYO14602 144 aaKnown RBP7.78□□□□□ -1.16
CTDSPL2-207ENST00000559738 PRR23CQ6ZRP0 262 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms