RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 INTS3Q68E01 1043 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-208ENST00000559686 FBXW7Q969H0 707 aa11.79□□□□□ -0.52
SNRPA1-208ENST00000559686 ANKIB1Q9P2G1 1089 aa11.79□□□□□ -0.52
SNRPA1-208ENST00000559686 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
SNRPA1-208ENST00000559686 PSME4Q14997 1843 aa11.79□□□□□ -0.52
SNRPA1-208ENST00000559686 NF2P35240 595 aa11.78□□□□□ -0.52
SNRPA1-208ENST00000559686 CD99L2Q8TCZ2 262 aa11.78□□□□□ -0.52
SNRPA1-208ENST00000559686 MXD3Q9BW11 206 aa11.78□□□□□ -0.52
SNRPA1-208ENST00000559686 PITPNM2Q9BZ72 1349 aa11.78□□□□□ -0.52
SNRPA1-208ENST00000559686 SASH1O94885 1247 aa11.77□□□□□ -0.53
SNRPA1-208ENST00000559686 ARMC9Q7Z3E5 817 aa11.77□□□□□ -0.53
SNRPA1-208ENST00000559686 AGBL3Q8NEM8 1001 aa11.77□□□□□ -0.53
SNRPA1-208ENST00000559686 GGA1Q9UJY5 639 aa11.77□□□□□ -0.53
SNRPA1-208ENST00000559686 H0YGN5 161 aa11.76□□□□□ -0.53
SNRPA1-208ENST00000559686 PRKCSHP14314 528 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-208ENST00000559686 PPP2R1AP30153 589 aa11.76□□□□□ -0.53
SNRPA1-208ENST00000559686 RPS8P62241 208 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-208ENST00000559686 SPRYD7Q5W111 196 aa11.76□□□□□ -0.53
SNRPA1-208ENST00000559686 SLC17A8Q8NDX2 589 aa11.76□□□□□ -0.53
SNRPA1-208ENST00000559686 CCDC85AQ96PX6 553 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-208ENST00000559686 TMEM106CQ9BVX2 250 aa11.76□□□□□ -0.53
SNRPA1-208ENST00000559686 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
SNRPA1-208ENST00000559686 ANGEL1Q9UNK9 670 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-208ENST00000559686 PTPN22Q9Y2R2 807 aa11.76□□□□□ -0.53
SNRPA1-208ENST00000559686 SF3B3Q15393 1217 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-208ENST00000559686 NFE2L2Q16236 605 aa11.75□□□□□ -0.53
SNRPA1-208ENST00000559686 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
SNRPA1-208ENST00000559686 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
SNRPA1-208ENST00000559686 GMLQ99445 158 aa11.75□□□□□ -0.53
SNRPA1-208ENST00000559686 USP17L3A6NCW0 530 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 USP17L4A6NCW7 530 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 IGF2BP3O00425 579 aaKnown RBP eCLIP11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 IRS4O14654 1257 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 SLC4A8Q2Y0W8 1093 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 USP17L1Q7RTZ2 530 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 ZNF579Q8NAF0 562 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 SLC10A4Q96EP9 437 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 ERO1AQ96HE7 468 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 CLMNQ96JQ2 1002 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 CFHR5Q9BXR6 569 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 EFCC1Q9HA90 598 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 ZNF609O15014 1411 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
SNRPA1-208ENST00000559686 MANSC4A6NHS7 340 aaPredicted RBP11.73□□□□□ -0.53
SNRPA1-208ENST00000559686 WTIPA6NIX2 430 aaPredicted RBP11.73□□□□□ -0.53
SNRPA1-208ENST00000559686 WNT10BO00744 389 aa11.73□□□□□ -0.53
SNRPA1-208ENST00000559686 CAP1Q01518 475 aa11.73□□□□□ -0.53
SNRPA1-208ENST00000559686 CRHR2Q13324 411 aa11.73□□□□□ -0.53
SNRPA1-208ENST00000559686 KRT24Q2M2I5 525 aa11.73□□□□□ -0.53
SNRPA1-208ENST00000559686 JARID2Q92833 1246 aaPredicted RBP11.73□□□□□ -0.53
SNRPA1-208ENST00000559686 ARMC5Q96C12 935 aa11.73□□□□□ -0.53
SNRPA1-208ENST00000559686 COL6A3P12111 3177 aa11.73□□□□□ -0.53
SNRPA1-208ENST00000559686 MAPK8IP3Q9UPT6 1336 aa11.72□□□□□ -0.53
SNRPA1-208ENST00000559686 TRIM26Q12899 539 aaPredicted RBP11.72□□□□□ -0.53
SNRPA1-208ENST00000559686 OGFOD1Q8N543 542 aa11.72□□□□□ -0.53
SNRPA1-208ENST00000559686 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
SNRPA1-208ENST00000559686 WNK4Q96J92 1243 aa11.72□□□□□ -0.53
SNRPA1-208ENST00000559686 PODXL2Q9NZ53 605 aa11.72□□□□□ -0.53
SNRPA1-208ENST00000559686 CHPF2Q9P2E5 772 aa11.72□□□□□ -0.53
SNRPA1-208ENST00000559686 ZNF646O15015 1829 aaPredicted RBP11.72□□□□□ -0.53
SNRPA1-208ENST00000559686 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
SNRPA1-208ENST00000559686 SLC9C1Q4G0N8 1177 aa11.71□□□□□ -0.53
SNRPA1-208ENST00000559686 LDLRAD1Q5T700 205 aa11.71□□□□□ -0.53
SNRPA1-208ENST00000559686 ISCA1Q9BUE6 129 aa11.71□□□□□ -0.53
SNRPA1-208ENST00000559686 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-208ENST00000559686 PTCH2Q9Y6C5 1203 aa11.71□□□□□ -0.53
SNRPA1-208ENST00000559686 ZSWIM8A7E2V4 1837 aa11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 CLSPNQ9HAW4 1339 aa11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 INHBEP58166 350 aa11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 SP3Q02447 781 aa11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 ANKRD13DQ6ZTN6 518 aa11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 APOBEC3FQ8IUX4 373 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 KIAA0825Q8IV33 1275 aa11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 PLBD2Q8NHP8 589 aa11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 DPF3Q92784 378 aa11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 PLEKHF1Q96S99 279 aa11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 LAS1LQ9Y4W2 734 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-208ENST00000559686 XDHP47989 1333 aa11.69□□□□□ -0.54
SNRPA1-208ENST00000559686 DACT2Q5SW24 774 aa11.69□□□□□ -0.54
SNRPA1-208ENST00000559686 PODNQ7Z5L7 613 aa11.69□□□□□ -0.54
SNRPA1-208ENST00000559686 SH3TC2Q8TF17 1288 aa11.69□□□□□ -0.54
SNRPA1-208ENST00000559686 KIAA0100Q14667 2235 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-208ENST00000559686 A0A0C4DFX4 3053 aa11.68□□□□□ -0.54
SNRPA1-208ENST00000559686 ATP2B4P23634 1241 aa11.68□□□□□ -0.54
SNRPA1-208ENST00000559686 GJA5P36382 358 aa11.68□□□□□ -0.54
SNRPA1-208ENST00000559686 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
SNRPA1-208ENST00000559686 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
SNRPA1-208ENST00000559686 LAMB1P07942 1786 aa11.67□□□□□ -0.54
SNRPA1-208ENST00000559686 TRIOBPQ9H2D6 2365 aa11.67□□□□□ -0.54
SNRPA1-208ENST00000559686 RANBP2P49792 3224 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-208ENST00000559686 ZBTB48P10074 688 aaPredicted RBP11.67□□□□□ -0.54
SNRPA1-208ENST00000559686 RIPK4P57078 832 aa11.67□□□□□ -0.54
SNRPA1-208ENST00000559686 CCDC152Q4G0S7 254 aa11.67□□□□□ -0.54
SNRPA1-208ENST00000559686 OTUD7BQ6GQQ9 843 aa11.67□□□□□ -0.54
SNRPA1-208ENST00000559686 ANKRD18AQ8IVF6 992 aa11.67□□□□□ -0.54
SNRPA1-208ENST00000559686 PTPN18Q99952 460 aa11.67□□□□□ -0.54
SNRPA1-208ENST00000559686 DEFB129Q9H1M3 183 aa11.67□□□□□ -0.54
SNRPA1-208ENST00000559686 CLRN2A0PK11 232 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms