RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 SLX4Q8IY92 1834 aa21.08■□□□□ 0.96
CHRNA3-206ENST00000559658 KIF13BQ9NQT8 1826 aa21.07■□□□□ 0.96
CHRNA3-206ENST00000559658 GPSM2P81274 684 aa21.07■□□□□ 0.96
CHRNA3-206ENST00000559658 TXNRD3Q86VQ6 643 aa21.07■□□□□ 0.96
CHRNA3-206ENST00000559658 SLC16A10Q8TF71 515 aa21.07■□□□□ 0.96
CHRNA3-206ENST00000559658 DUOX1Q9NRD9 1551 aa21.07■□□□□ 0.96
CHRNA3-206ENST00000559658 KIAA1551Q9HCM1 1747 aa21.07■□□□□ 0.96
CHRNA3-206ENST00000559658 ZAP70P43403 619 aa21.07■□□□□ 0.96
CHRNA3-206ENST00000559658 FSD1Q9BTV5 496 aa21.07■□□□□ 0.96
CHRNA3-206ENST00000559658 PAG1Q9NWQ8 432 aa21.07■□□□□ 0.96
CHRNA3-206ENST00000559658 IQSEC3Q9UPP2 1182 aaPredicted RBP21.07■□□□□ 0.96
CHRNA3-206ENST00000559658 IRS2Q9Y4H2 1338 aa21.06■□□□□ 0.96
CHRNA3-206ENST00000559658 PPEF1O14829 653 aaPredicted RBP21.06■□□□□ 0.96
CHRNA3-206ENST00000559658 NPR1P16066 1061 aa21.06■□□□□ 0.96
CHRNA3-206ENST00000559658 FKBP4Q02790 459 aaKnown RBP eCLIP21.06■□□□□ 0.96
CHRNA3-206ENST00000559658 ARID4AP29374 1257 aaPredicted RBP21.05■□□□□ 0.96
CHRNA3-206ENST00000559658 RASGRF1Q13972 1273 aa21.05■□□□□ 0.96
CHRNA3-206ENST00000559658 UBE4AQ14139 1066 aa21.05■□□□□ 0.96
CHRNA3-206ENST00000559658 ZNF622Q969S3 477 aaKnown RBP eCLIP21.05■□□□□ 0.96
CHRNA3-206ENST00000559658 ESYT1Q9BSJ8 1104 aa21.05■□□□□ 0.96
CHRNA3-206ENST00000559658 CWC27Q6UX04 472 aaKnown RBP21.05■□□□□ 0.96
CHRNA3-206ENST00000559658 MASTLQ96GX5 879 aa21.05■□□□□ 0.96
CHRNA3-206ENST00000559658 FAM227BQ96M60 508 aa21.05■□□□□ 0.96
CHRNA3-206ENST00000559658 ANKIB1Q9P2G1 1089 aa21.05■□□□□ 0.96
CHRNA3-206ENST00000559658 ZNF804BA4D1E1 1349 aa21.04■□□□□ 0.96
CHRNA3-206ENST00000559658 MYH13Q9UKX3 1938 aa21.04■□□□□ 0.96
CHRNA3-206ENST00000559658 KCNJ4P48050 445 aa21.04■□□□□ 0.96
CHRNA3-206ENST00000559658 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.04■□□□□ 0.96
CHRNA3-206ENST00000559658 ANKRD2Q9GZV1 360 aa21.04■□□□□ 0.96
CHRNA3-206ENST00000559658 MYH7P12883 1935 aa21.04■□□□□ 0.96
CHRNA3-206ENST00000559658 HMG20BQ9P0W2 317 aa21.03■□□□□ 0.96
CHRNA3-206ENST00000559658 NSFL1CQ9UNZ2 370 aaKnown RBP21.03■□□□□ 0.96
CHRNA3-206ENST00000559658 DOCK2Q92608 1830 aa21.03■□□□□ 0.96
CHRNA3-206ENST00000559658 XDHP47989 1333 aa21.03■□□□□ 0.96
CHRNA3-206ENST00000559658 A0A0D9SFI3 127 aa21.03■□□□□ 0.96
CHRNA3-206ENST00000559658 BBOX1O75936 387 aa21.03■□□□□ 0.96
CHRNA3-206ENST00000559658 NMIQ13287 307 aaPredicted RBP21.03■□□□□ 0.96
CHRNA3-206ENST00000559658 FAM84BQ96KN1 310 aaPredicted RBP21.03■□□□□ 0.96
CHRNA3-206ENST00000559658 MTFR1LQ9H019 292 aa21.03■□□□□ 0.96
CHRNA3-206ENST00000559658 CYP2E1P05181 493 aaPredicted RBP21.02■□□□□ 0.96
CHRNA3-206ENST00000559658 CASC1Q6TDU7 716 aa21.02■□□□□ 0.96
CHRNA3-206ENST00000559658 PIH1D3Q9NQM4 214 aaKnown RBP21.02■□□□□ 0.96
CHRNA3-206ENST00000559658 H0YIN7 160 aa21.01■□□□□ 0.95
CHRNA3-206ENST00000559658 KBTBD3Q8NAB2 608 aa21.01■□□□□ 0.95
CHRNA3-206ENST00000559658 ZNF512BQ96KM6 892 aaPredicted RBP21.01■□□□□ 0.95
CHRNA3-206ENST00000559658 TBC1D32Q96NH3 1257 aa21.01■□□□□ 0.95
CHRNA3-206ENST00000559658 SRCAPQ6ZRS2 3230 aa21.01■□□□□ 0.95
CHRNA3-206ENST00000559658 UFL1O94874 794 aa21.01■□□□□ 0.95
CHRNA3-206ENST00000559658 PRPF40BQ6NWY9 871 aaKnown RBP21.01■□□□□ 0.95
CHRNA3-206ENST00000559658 DIAPH3Q9NSV4 1193 aa21.01■□□□□ 0.95
CHRNA3-206ENST00000559658 ZNF219Q9P2Y4 722 aaPredicted RBP21.01■□□□□ 0.95
CHRNA3-206ENST00000559658 POLLQ9UGP5 575 aa21.01■□□□□ 0.95
CHRNA3-206ENST00000559658 ATP6V0A2Q9Y487 856 aa21.01■□□□□ 0.95
CHRNA3-206ENST00000559658 SPATA5Q8NB90 893 aa21■□□□□ 0.95
CHRNA3-206ENST00000559658 SEC62Q99442 399 aaKnown RBP21■□□□□ 0.95
CHRNA3-206ENST00000559658 SGIP1Q9BQI5 828 aa21■□□□□ 0.95
CHRNA3-206ENST00000559658 SGSM2O43147 1006 aa20.99■□□□□ 0.95
CHRNA3-206ENST00000559658 UQCRFS1P1P0C7P4 283 aa20.99■□□□□ 0.95
CHRNA3-206ENST00000559658 STYK1Q6J9G0 422 aa20.99■□□□□ 0.95
CHRNA3-206ENST00000559658 C22orf23Q9BZE7 217 aa20.99■□□□□ 0.95
CHRNA3-206ENST00000559658 WWC3Q9ULE0 1092 aa20.99■□□□□ 0.95
CHRNA3-206ENST00000559658 A0A0G2JLW4 131 aa20.98■□□□□ 0.95
CHRNA3-206ENST00000559658 FBXO33Q7Z6M2 555 aa20.98■□□□□ 0.95
CHRNA3-206ENST00000559658 SP8Q8IXZ3 490 aa20.98■□□□□ 0.95
CHRNA3-206ENST00000559658 ALDH1B1P30837 517 aa20.98■□□□□ 0.95
CHRNA3-206ENST00000559658 ZNF589Q86UQ0 364 aaPredicted RBP20.98■□□□□ 0.95
CHRNA3-206ENST00000559658 TBC1D16Q8TBP0 767 aa20.98■□□□□ 0.95
CHRNA3-206ENST00000559658 JAG2Q9Y219 1238 aa20.98■□□□□ 0.95
CHRNA3-206ENST00000559658 RFX7Q2KHR2 1363 aa20.97■□□□□ 0.95
CHRNA3-206ENST00000559658 DPEP1P16444 411 aa20.97■□□□□ 0.95
CHRNA3-206ENST00000559658 KCNA3P22001 575 aa20.97■□□□□ 0.95
CHRNA3-206ENST00000559658 CCDC129Q6ZRS4 1044 aa20.97■□□□□ 0.95
CHRNA3-206ENST00000559658 USP26Q9BXU7 913 aa20.97■□□□□ 0.95
CHRNA3-206ENST00000559658 ANO2Q9NQ90 1003 aa20.97■□□□□ 0.95
CHRNA3-206ENST00000559658 PODXL2Q9NZ53 605 aa20.97■□□□□ 0.95
CHRNA3-206ENST00000559658 GGA1Q9UJY5 639 aa20.97■□□□□ 0.95
CHRNA3-206ENST00000559658 LEMD3Q9Y2U8 911 aa20.97■□□□□ 0.95
CHRNA3-206ENST00000559658 MED23Q9ULK4 1368 aa20.97■□□□□ 0.95
CHRNA3-206ENST00000559658 PTGER2P43116 358 aa20.96■□□□□ 0.95
CHRNA3-206ENST00000559658 CAVIN4Q5BKX8 364 aa20.96■□□□□ 0.95
CHRNA3-206ENST00000559658 UPF2Q9HAU5 1272 aaKnown RBP20.96■□□□□ 0.95
CHRNA3-206ENST00000559658 BRCA1P38398 1863 aaKnown RBP20.96■□□□□ 0.95
CHRNA3-206ENST00000559658 SNED1Q8TER0 1413 aa20.96■□□□□ 0.95
CHRNA3-206ENST00000559658 VPS37DQ86XT2 251 aa20.96■□□□□ 0.95
CHRNA3-206ENST00000559658 CHD4Q14839 1912 aa20.95■□□□□ 0.94
CHRNA3-206ENST00000559658 HIBADHP31937 336 aaKnown RBP20.95■□□□□ 0.94
CHRNA3-206ENST00000559658 POLD1P28340 1107 aa20.94■□□□□ 0.94
CHRNA3-206ENST00000559658 TMC4Q7Z404 712 aa20.94■□□□□ 0.94
CHRNA3-206ENST00000559658 C6orf229H3BNL8 230 aa20.94■□□□□ 0.94
CHRNA3-206ENST00000559658 ATP2B4P23634 1241 aa20.94■□□□□ 0.94
CHRNA3-206ENST00000559658 PTH1RQ03431 593 aa20.94■□□□□ 0.94
CHRNA3-206ENST00000559658 C7orf43Q8WVR3 580 aa20.94■□□□□ 0.94
CHRNA3-206ENST00000559658 LSG1Q9H089 658 aaKnown RBP20.94■□□□□ 0.94
CHRNA3-206ENST00000559658 IDH1O75874 414 aaKnown RBP20.93■□□□□ 0.94
CHRNA3-206ENST00000559658 REC8O95072 547 aa20.93■□□□□ 0.94
CHRNA3-206ENST00000559658 KLHL34Q8N239 644 aa20.93■□□□□ 0.94
CHRNA3-206ENST00000559658 PPP1R1BQ9UD71 204 aaPredicted RBP20.93■□□□□ 0.94
CHRNA3-206ENST00000559658 UTRNP46939 3433 aa20.93■□□□□ 0.94
CHRNA3-206ENST00000559658 M0R2C6 588 aa20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 RNF113AO15541 343 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms