RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 SAGE1Q9NXZ1 904 aa11.19□□□□□ -0.62
CLPX-205ENST00000559218 APAF1O14727 1248 aa11.18□□□□□ -0.62
CLPX-205ENST00000559218 PDE8AO60658 829 aa11.18□□□□□ -0.62
CLPX-205ENST00000559218 MOB2Q70IA6 237 aa11.18□□□□□ -0.62
CLPX-205ENST00000559218 CCDC191Q8NCU4 936 aa11.18□□□□□ -0.62
CLPX-205ENST00000559218 AGBL3Q8NEM8 1001 aa11.18□□□□□ -0.62
CLPX-205ENST00000559218 IFT57Q9NWB7 429 aa11.18□□□□□ -0.62
CLPX-205ENST00000559218 CWC25Q9NXE8 425 aaPredicted RBP11.18□□□□□ -0.62
CLPX-205ENST00000559218 FARP1Q9Y4F1 1045 aaPredicted RBP11.18□□□□□ -0.62
CLPX-205ENST00000559218 POLR2AP24928 1970 aaKnown RBP11.17□□□□□ -0.62
CLPX-205ENST00000559218 XDHP47989 1333 aa11.17□□□□□ -0.62
CLPX-205ENST00000559218 USP17L8P0C7I0 530 aa11.17□□□□□ -0.62
CLPX-205ENST00000559218 HSP90B1P14625 803 aaKnown RBP11.17□□□□□ -0.62
CLPX-205ENST00000559218 SOX10P56693 466 aa11.17□□□□□ -0.62
CLPX-205ENST00000559218 PRAMEF18Q5VWM3 479 aa11.17□□□□□ -0.62
CLPX-205ENST00000559218 RASAL3Q86YV0 1011 aa11.17□□□□□ -0.62
CLPX-205ENST00000559218 METTL22Q9BUU2 404 aaPredicted RBP11.17□□□□□ -0.62
CLPX-205ENST00000559218 MXD3Q9BW11 206 aa11.17□□□□□ -0.62
CLPX-205ENST00000559218 MYOZ2Q9NPC6 264 aa11.17□□□□□ -0.62
CLPX-205ENST00000559218 ZNF609O15014 1411 aa11.17□□□□□ -0.62
CLPX-205ENST00000559218 USP17L3A6NCW0 530 aa11.16□□□□□ -0.62
CLPX-205ENST00000559218 USP17L4A6NCW7 530 aa11.16□□□□□ -0.62
CLPX-205ENST00000559218 GNAI1P63096 354 aa11.16□□□□□ -0.62
CLPX-205ENST00000559218 USP17L1Q7RTZ2 530 aa11.16□□□□□ -0.62
CLPX-205ENST00000559218 ANKRD18AQ8IVF6 992 aa11.16□□□□□ -0.62
CLPX-205ENST00000559218 TSPYL6Q8N831 410 aa11.16□□□□□ -0.62
CLPX-205ENST00000559218 MAP3K2Q9Y2U5 619 aa11.16□□□□□ -0.62
CLPX-205ENST00000559218 UBE2Q2LH0YL09 131 aa11.15□□□□□ -0.62
CLPX-205ENST00000559218 IGKV5-2P06315 115 aa11.15□□□□□ -0.62
CLPX-205ENST00000559218 ATP2B4P23634 1241 aa11.15□□□□□ -0.62
CLPX-205ENST00000559218 CTSWP56202 376 aa11.15□□□□□ -0.62
CLPX-205ENST00000559218 EVX2Q03828 476 aa11.15□□□□□ -0.62
CLPX-205ENST00000559218 NBPF9Q3BBW0 867 aa11.15□□□□□ -0.62
CLPX-205ENST00000559218 PODNQ7Z5L7 613 aa11.15□□□□□ -0.62
CLPX-205ENST00000559218 TTLL11Q8NHH1 800 aa11.15□□□□□ -0.62
CLPX-205ENST00000559218 GREM2Q9H772 168 aa11.15□□□□□ -0.62
CLPX-205ENST00000559218 PI4KAP2A4QPH2 592 aa11.14□□□□□ -0.63
CLPX-205ENST00000559218 DDX58O95786 925 aaKnown RBP11.14□□□□□ -0.63
CLPX-205ENST00000559218 FKBP1BP68106 108 aa11.14□□□□□ -0.63
CLPX-205ENST00000559218 CWF19L2Q2TBE0 894 aaKnown RBP11.14□□□□□ -0.63
CLPX-205ENST00000559218 DACT2Q5SW24 774 aa11.14□□□□□ -0.63
CLPX-205ENST00000559218 CTU1Q7Z7A3 348 aaKnown RBP11.14□□□□□ -0.63
CLPX-205ENST00000559218 PI4KAP1Q8N8J0 262 aa11.14□□□□□ -0.63
CLPX-205ENST00000559218 TSR2Q969E8 191 aaKnown RBP11.14□□□□□ -0.63
CLPX-205ENST00000559218 CDC5LQ99459 802 aaKnown RBP11.14□□□□□ -0.63
CLPX-205ENST00000559218 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
CLPX-205ENST00000559218 MINPP1Q9UNW1 487 aa11.14□□□□□ -0.63
CLPX-205ENST00000559218 PITPNM2Q9BZ72 1349 aa11.13□□□□□ -0.63
CLPX-205ENST00000559218 HTTP42858 3142 aa11.13□□□□□ -0.63
CLPX-205ENST00000559218 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
CLPX-205ENST00000559218 KLRK1P26718 216 aa11.13□□□□□ -0.63
CLPX-205ENST00000559218 CALD1Q05682 793 aaKnown RBP11.13□□□□□ -0.63
CLPX-205ENST00000559218 CCDC30Q5VVM6 783 aa11.13□□□□□ -0.63
CLPX-205ENST00000559218 KSR2Q6VAB6 950 aa11.13□□□□□ -0.63
CLPX-205ENST00000559218 TXNRD3Q86VQ6 643 aa11.13□□□□□ -0.63
CLPX-205ENST00000559218 FBXW7Q969H0 707 aa11.13□□□□□ -0.63
CLPX-205ENST00000559218 BSDC1Q9NW68 430 aaPredicted RBP11.13□□□□□ -0.63
CLPX-205ENST00000559218 MED23Q9ULK4 1368 aa11.13□□□□□ -0.63
CLPX-205ENST00000559218 SASH1O94885 1247 aa11.12□□□□□ -0.63
CLPX-205ENST00000559218 TBC1D8O95759 1140 aa11.12□□□□□ -0.63
CLPX-205ENST00000559218 CCT4P50991 539 aaKnown RBP11.12□□□□□ -0.63
CLPX-205ENST00000559218 G2E3Q7L622 706 aa11.12□□□□□ -0.63
CLPX-205ENST00000559218 PAPPA2Q9BXP8 1791 aa11.12□□□□□ -0.63
CLPX-205ENST00000559218 NEURL1BA8MQ27 555 aa11.11□□□□□ -0.63
CLPX-205ENST00000559218 WNT10BO00744 389 aa11.11□□□□□ -0.63
CLPX-205ENST00000559218 MKRN3Q13064 507 aaKnown RBP11.11□□□□□ -0.63
CLPX-205ENST00000559218 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
CLPX-205ENST00000559218 UBE3BQ7Z3V4 1068 aa11.11□□□□□ -0.63
CLPX-205ENST00000559218 ZNF296Q8WUU4 475 aaPredicted RBP11.11□□□□□ -0.63
CLPX-205ENST00000559218 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
CLPX-205ENST00000559218 H7C1W4 665 aa11.1□□□□□ -0.63
CLPX-205ENST00000559218 STRIP1Q5VSL9 837 aa11.1□□□□□ -0.63
CLPX-205ENST00000559218 OGFOD1Q8N543 542 aa11.1□□□□□ -0.63
CLPX-205ENST00000559218 COA1Q9GZY4 146 aa11.1□□□□□ -0.63
CLPX-205ENST00000559218 PSME4Q14997 1843 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 TM4SF4P48230 202 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 PTPN12Q05209 780 aaKnown RBP11.09□□□□□ -0.63
CLPX-205ENST00000559218 NEXNQ0ZGT2 675 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 PRKG1Q13976 671 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 KIAA0825Q8IV33 1275 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 STK31Q9BXU1 1019 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 R3HDMLQ9H3Y0 253 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 FZD1Q9UP38 647 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 AKAP11Q9UKA4 1901 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 ZNF804BA4D1E1 1349 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 MYO3BQ8WXR4 1341 aa11.09□□□□□ -0.63
CLPX-205ENST00000559218 SNAP23O00161 211 aa11.08□□□□□ -0.64
CLPX-205ENST00000559218 ITGA6P23229 1130 aa11.08□□□□□ -0.64
CLPX-205ENST00000559218 IGHMBP2P38935 993 aaKnown RBP11.08□□□□□ -0.64
CLPX-205ENST00000559218 CASP7P55210 303 aa11.08□□□□□ -0.64
CLPX-205ENST00000559218 GTF2IP78347 998 aa11.08□□□□□ -0.64
CLPX-205ENST00000559218 GCKRQ14397 625 aa11.08□□□□□ -0.64
CLPX-205ENST00000559218 CCDC184Q52MB2 194 aa11.08□□□□□ -0.64
CLPX-205ENST00000559218 TTLL5Q6EMB2 1281 aa11.08□□□□□ -0.64
CLPX-205ENST00000559218 ZBED3Q96IU2 234 aaPredicted RBP11.08□□□□□ -0.64
CLPX-205ENST00000559218 CHMP4AQ9BY43 222 aa11.08□□□□□ -0.64
CLPX-205ENST00000559218 HDAC9Q9UKV0 1011 aa11.08□□□□□ -0.64
CLPX-205ENST00000559218 MKI67P46013 3256 aaKnown RBP11.08□□□□□ -0.64
CLPX-205ENST00000559218 ZNF646O15015 1829 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms