RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 LLPHQ9BRT6 129 aaKnown RBP13.37□□□□□ -0.27
CLPX-204ENST00000559152 TMEM63CQ9P1W3 806 aa13.37□□□□□ -0.27
CLPX-204ENST00000559152 ZNF652Q9Y2D9 606 aa13.37□□□□□ -0.27
CLPX-204ENST00000559152 UBN2Q6ZU65 1347 aa13.37□□□□□ -0.27
CLPX-204ENST00000559152 CICQ96RK0 1608 aaPredicted RBP13.37□□□□□ -0.27
CLPX-204ENST00000559152 A0A0G2JS52 829 aa13.37□□□□□ -0.27
CLPX-204ENST00000559152 CCDC173Q0VFZ6 552 aa13.37□□□□□ -0.27
CLPX-204ENST00000559152 PUM3Q15397 648 aaKnown RBP13.37□□□□□ -0.27
CLPX-204ENST00000559152 WASHC4Q2M389 1173 aa13.37□□□□□ -0.27
CLPX-204ENST00000559152 VGLL2Q8N8G2 317 aa13.37□□□□□ -0.27
CLPX-204ENST00000559152 LPIN2Q92539 896 aa13.37□□□□□ -0.27
CLPX-204ENST00000559152 VPS37CA5D8V6 355 aaPredicted RBP13.36□□□□□ -0.27
CLPX-204ENST00000559152 CHGBP05060 677 aa13.36□□□□□ -0.27
CLPX-204ENST00000559152 IMMTQ16891 758 aaKnown RBP13.36□□□□□ -0.27
CLPX-204ENST00000559152 ACSBG1Q96GR2 724 aa13.36□□□□□ -0.27
CLPX-204ENST00000559152 CHAMP1Q96JM3 812 aa13.36□□□□□ -0.27
CLPX-204ENST00000559152 TCEANC2Q96MN5 208 aa13.36□□□□□ -0.27
CLPX-204ENST00000559152 KIF3AQ9Y496 699 aa13.36□□□□□ -0.27
CLPX-204ENST00000559152 RGL2O15211 777 aa13.36□□□□□ -0.27
CLPX-204ENST00000559152 ZAP70P43403 619 aa13.36□□□□□ -0.27
CLPX-204ENST00000559152 FOXD4L6Q3SYB3 417 aaPredicted RBP13.36□□□□□ -0.27
CLPX-204ENST00000559152 FOXD4L3Q6VB84 417 aaPredicted RBP13.36□□□□□ -0.27
CLPX-204ENST00000559152 FBXL16Q8N461 479 aa13.36□□□□□ -0.27
CLPX-204ENST00000559152 OSBP2Q969R2 916 aa13.36□□□□□ -0.27
CLPX-204ENST00000559152 RBM27Q9P2N5 1060 aaKnown RBP13.36□□□□□ -0.27
CLPX-204ENST00000559152 CNPY2Q9Y2B0 182 aa13.36□□□□□ -0.27
CLPX-204ENST00000559152 NUP98P52948 1817 aa13.36□□□□□ -0.27
CLPX-204ENST00000559152 E7EWF7 191 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 M0R2C6 588 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 CAMTA2O94983 1202 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 EXOSC10Q01780 885 aaKnown RBP13.35□□□□□ -0.27
CLPX-204ENST00000559152 CCDC152Q4G0S7 254 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 SUSD4Q5VX71 490 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 TRIM44Q96DX7 344 aaPredicted RBP13.35□□□□□ -0.27
CLPX-204ENST00000559152 AGXT2Q9BYV1 514 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 RTL9Q8NET4 1388 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 PFKFB2O60825 505 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 ARID4AP29374 1257 aaPredicted RBP13.35□□□□□ -0.27
CLPX-204ENST00000559152 KRT85P78386 507 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 CLEC4GQ6UXB4 293 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 BRF1Q92994 677 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 MPHOSPH8Q99549 860 aa13.35□□□□□ -0.27
CLPX-204ENST00000559152 NSFL1CQ9UNZ2 370 aaKnown RBP13.35□□□□□ -0.27
CLPX-204ENST00000559152 RREB1Q92766 1687 aa13.34□□□□□ -0.27
CLPX-204ENST00000559152 MYH3P11055 1940 aa13.34□□□□□ -0.27
CLPX-204ENST00000559152 SYCE3A1L190 88 aa13.34□□□□□ -0.27
CLPX-204ENST00000559152 SLC5A1P13866 664 aa13.34□□□□□ -0.27
CLPX-204ENST00000559152 HMGN5P82970 282 aaKnown RBP13.34□□□□□ -0.27
CLPX-204ENST00000559152 UBE3CQ15386 1083 aa13.34□□□□□ -0.27
CLPX-204ENST00000559152 STOX1Q6ZVD7 989 aa13.34□□□□□ -0.27
CLPX-204ENST00000559152 GDPD2Q9HCC8 539 aa13.34□□□□□ -0.27
CLPX-204ENST00000559152 MCAMP43121 646 aa13.33□□□□□ -0.27
CLPX-204ENST00000559152 STK3Q13188 491 aa13.33□□□□□ -0.27
CLPX-204ENST00000559152 ITPK1Q13572 414 aa13.33□□□□□ -0.27
CLPX-204ENST00000559152 SCARF1Q14162 830 aa13.33□□□□□ -0.27
CLPX-204ENST00000559152 CCDC183Q5T5S1 534 aa13.33□□□□□ -0.27
CLPX-204ENST00000559152 ZNF274Q96GC6 653 aaPredicted RBP13.33□□□□□ -0.27
CLPX-204ENST00000559152 C8orf37Q96NL8 207 aa13.33□□□□□ -0.27
CLPX-204ENST00000559152 PPP1R9BQ96SB3 815 aa13.33□□□□□ -0.27
CLPX-204ENST00000559152 GADD45BO75293 160 aaPredicted RBP13.33□□□□□ -0.28
CLPX-204ENST00000559152 FGFR2P21802 821 aa13.33□□□□□ -0.28
CLPX-204ENST00000559152 IGHMBP2P38935 993 aaKnown RBP13.33□□□□□ -0.28
CLPX-204ENST00000559152 DNM1Q05193 864 aaKnown RBP13.33□□□□□ -0.28
CLPX-204ENST00000559152 CCDC102BQ68D86 513 aa13.33□□□□□ -0.28
CLPX-204ENST00000559152 FAM184AQ8NB25 1140 aa13.33□□□□□ -0.28
CLPX-204ENST00000559152 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.28
CLPX-204ENST00000559152 NIP7Q9Y221 180 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLPX-204ENST00000559152 ELP1O95163 1332 aa13.33□□□□□ -0.28
CLPX-204ENST00000559152 LRP5O75197 1615 aa13.33□□□□□ -0.28
CLPX-204ENST00000559152 FIBPO43427 364 aa13.32□□□□□ -0.28
CLPX-204ENST00000559152 ADD2P35612 726 aa13.32□□□□□ -0.28
CLPX-204ENST00000559152 COL9A3Q14050 684 aaPredicted RBP13.32□□□□□ -0.28
CLPX-204ENST00000559152 VPS72Q15906 364 aa13.32□□□□□ -0.28
CLPX-204ENST00000559152 SLFNL1Q499Z3 407 aa13.32□□□□□ -0.28
CLPX-204ENST00000559152 SMARCC2Q8TAQ2 1214 aa13.32□□□□□ -0.28
CLPX-204ENST00000559152 TSPY26PQ9H489 355 aa13.32□□□□□ -0.28
CLPX-204ENST00000559152 ZSCAN16Q9H4T2 348 aaPredicted RBP13.32□□□□□ -0.28
CLPX-204ENST00000559152 SLC9C2Q5TAH2 1124 aa13.32□□□□□ -0.28
CLPX-204ENST00000559152 WDR19Q8NEZ3 1342 aa13.32□□□□□ -0.28
CLPX-204ENST00000559152 ATRNO75882 1429 aa13.32□□□□□ -0.28
CLPX-204ENST00000559152 KAT6BQ8WYB5 2073 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 ZNF831Q5JPB2 1677 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 H3BQV1 296 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 ZNF213O14771 459 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 GPAA1O43292 621 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 FGAP02671 866 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 HCLS1P14317 486 aaPredicted RBP13.31□□□□□ -0.28
CLPX-204ENST00000559152 EVCP57679 992 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 IFFO2Q5TF58 517 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 CDC37L1Q7L3B6 337 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 PUS7LQ9H0K6 701 aaKnown RBP13.31□□□□□ -0.28
CLPX-204ENST00000559152 RBSNQ9H1K0 784 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 DHX16O60231 1041 aaKnown RBP13.31□□□□□ -0.28
CLPX-204ENST00000559152 NTSR2O95665 410 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 MCM5P33992 734 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 SCRN1Q12765 414 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 NCOA7Q8NI08 942 aa13.31□□□□□ -0.28
CLPX-204ENST00000559152 CDC5LQ99459 802 aaKnown RBP13.31□□□□□ -0.28
CLPX-204ENST00000559152 MAP3K12Q12852 859 aa13.3□□□□□ -0.28
CLPX-204ENST00000559152 MEX3CQ5U5Q3 659 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms