RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 FNDC3AQ9Y2H6 1198 aaKnown RBP7.34□□□□□ -1.23
CASC4-206ENST00000558847 RPLP1P05386 114 aaKnown RBP7.33□□□□□ -1.24
CASC4-206ENST00000558847 EIF2AK2P19525 551 aaKnown RBP7.33□□□□□ -1.24
CASC4-206ENST00000558847 ITGAEP38570 1179 aa7.33□□□□□ -1.24
CASC4-206ENST00000558847 IREB2P48200 963 aaKnown RBP7.33□□□□□ -1.24
CASC4-206ENST00000558847 XKR5Q6UX68 686 aa7.33□□□□□ -1.24
CASC4-206ENST00000558847 FBXO11Q86XK2 927 aa7.33□□□□□ -1.24
CASC4-206ENST00000558847 OR13H1Q8NG92 308 aa7.33□□□□□ -1.24
CASC4-206ENST00000558847 RBCK1Q9BYM8 510 aa7.33□□□□□ -1.24
CASC4-206ENST00000558847 SMG9Q9H0W8 520 aaKnown RBP7.33□□□□□ -1.24
CASC4-206ENST00000558847 PLAURQ03405 335 aa7.32□□□□□ -1.24
CASC4-206ENST00000558847 PDE3BQ13370 1112 aa7.32□□□□□ -1.24
CASC4-206ENST00000558847 AAMPQ13685 434 aa7.32□□□□□ -1.24
CASC4-206ENST00000558847 ZNF438Q7Z4V0 828 aa7.32□□□□□ -1.24
CASC4-206ENST00000558847 NPAS4Q8IUM7 802 aa7.32□□□□□ -1.24
CASC4-206ENST00000558847 WFDC12Q8WWY7 111 aa7.32□□□□□ -1.24
CASC4-206ENST00000558847 ELP3Q9H9T3 547 aa7.32□□□□□ -1.24
CASC4-206ENST00000558847 ABI2Q9NYB9 513 aaPredicted RBP7.32□□□□□ -1.24
CASC4-206ENST00000558847 IGHA2P01877 340 aa7.31□□□□□ -1.24
CASC4-206ENST00000558847 PSAPP07602 524 aa7.31□□□□□ -1.24
CASC4-206ENST00000558847 PCSK2P16519 638 aa7.31□□□□□ -1.24
CASC4-206ENST00000558847 USP5P45974 858 aa7.31□□□□□ -1.24
CASC4-206ENST00000558847 LRP8Q14114 963 aa7.31□□□□□ -1.24
CASC4-206ENST00000558847 COL13A1Q5TAT6 717 aaPredicted RBP7.31□□□□□ -1.24
CASC4-206ENST00000558847 DMRTB1Q96MA1 342 aa7.31□□□□□ -1.24
CASC4-206ENST00000558847 NSUN5Q96P11 429 aaKnown RBP7.31□□□□□ -1.24
CASC4-206ENST00000558847 FAM129BQ96TA1 746 aa7.31□□□□□ -1.24
CASC4-206ENST00000558847 CHRDQ9H2X0 955 aa7.31□□□□□ -1.24
CASC4-206ENST00000558847 CYP2E1P05181 493 aaPredicted RBP7.3□□□□□ -1.24
CASC4-206ENST00000558847 GRIK5Q16478 980 aa7.3□□□□□ -1.24
CASC4-206ENST00000558847 C8orf34Q49A92 452 aa7.3□□□□□ -1.24
CASC4-206ENST00000558847 IGF2-ASQ6U949 168 aa7.3□□□□□ -1.24
CASC4-206ENST00000558847 CNTN3Q9P232 1028 aa7.3□□□□□ -1.24
CASC4-206ENST00000558847 KIF4AO95239 1232 aa7.29□□□□□ -1.24
CASC4-206ENST00000558847 GHRHP01286 108 aa7.29□□□□□ -1.24
CASC4-206ENST00000558847 NOS3P29474 1203 aa7.29□□□□□ -1.24
CASC4-206ENST00000558847 GDF6Q6KF10 455 aaPredicted RBP7.29□□□□□ -1.24
CASC4-206ENST00000558847 TTC9Q92623 222 aa7.29□□□□□ -1.24
CASC4-206ENST00000558847 SSBP4Q9BWG4 385 aaPredicted RBP7.29□□□□□ -1.24
CASC4-206ENST00000558847 RBSNQ9H1K0 784 aa7.29□□□□□ -1.24
CASC4-206ENST00000558847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.29□□□□□ -1.24
CASC4-206ENST00000558847 J3QW42 95 aa7.28□□□□□ -1.24
CASC4-206ENST00000558847 GPR182O15218 404 aa7.28□□□□□ -1.24
CASC4-206ENST00000558847 TNFRSF21O75509 655 aa7.28□□□□□ -1.24
CASC4-206ENST00000558847 EHHADHQ08426 723 aa7.28□□□□□ -1.24
CASC4-206ENST00000558847 TTC39BQ5VTQ0 682 aaPredicted RBP7.28□□□□□ -1.24
CASC4-206ENST00000558847 ILDR2Q71H61 639 aa7.28□□□□□ -1.24
CASC4-206ENST00000558847 C1orf127Q8N9H9 656 aa7.28□□□□□ -1.24
CASC4-206ENST00000558847 TMC1Q8TDI8 760 aa7.28□□□□□ -1.24
CASC4-206ENST00000558847 SNX29Q8TEQ0 813 aa7.28□□□□□ -1.24
CASC4-206ENST00000558847 GIPC2Q8TF65 315 aa7.28□□□□□ -1.24
CASC4-206ENST00000558847 PLD4Q96BZ4 506 aa7.28□□□□□ -1.24
CASC4-206ENST00000558847 FOXD3Q9UJU5 478 aaPredicted RBP7.28□□□□□ -1.24
CASC4-206ENST00000558847 LOC102724428A0A0B4J2F2 783 aa7.27□□□□□ -1.25
CASC4-206ENST00000558847 HYAL3O43820 417 aaPredicted RBP7.27□□□□□ -1.25
CASC4-206ENST00000558847 ZNF16P17020 682 aaPredicted RBP7.27□□□□□ -1.25
CASC4-206ENST00000558847 SIK1P57059 783 aa7.27□□□□□ -1.25
CASC4-206ENST00000558847 EAPPQ56P03 285 aaPredicted RBP7.27□□□□□ -1.25
CASC4-206ENST00000558847 TTC16Q8NEE8 873 aa7.27□□□□□ -1.25
CASC4-206ENST00000558847 ZNF428Q96B54 188 aa7.27□□□□□ -1.25
CASC4-206ENST00000558847 KANSL3Q9P2N6 904 aa7.27□□□□□ -1.25
CASC4-206ENST00000558847 DEAF1O75398 565 aaPredicted RBP7.26□□□□□ -1.25
CASC4-206ENST00000558847 NEFLP07196 543 aa7.26□□□□□ -1.25
CASC4-206ENST00000558847 TMC7Q7Z402 723 aa7.26□□□□□ -1.25
CASC4-206ENST00000558847 IL22RA1Q8N6P7 574 aa7.26□□□□□ -1.25
CASC4-206ENST00000558847 MEGF10Q96KG7 1140 aa7.26□□□□□ -1.25
CASC4-206ENST00000558847 AKTIPQ9H8T0 292 aa7.26□□□□□ -1.25
CASC4-206ENST00000558847 TREHO43280 583 aa7.25□□□□□ -1.25
CASC4-206ENST00000558847 HYAL2Q12891 473 aa7.25□□□□□ -1.25
CASC4-206ENST00000558847 FBXO33Q7Z6M2 555 aa7.25□□□□□ -1.25
CASC4-206ENST00000558847 SALL4Q9UJQ4 1053 aa7.25□□□□□ -1.25
CASC4-206ENST00000558847 DLL1O00548 723 aa7.24□□□□□ -1.25
CASC4-206ENST00000558847 EREGO14944 169 aa7.24□□□□□ -1.25
CASC4-206ENST00000558847 PHACTR2O75167 634 aa7.24□□□□□ -1.25
CASC4-206ENST00000558847 ALX3O95076 343 aa7.24□□□□□ -1.25
CASC4-206ENST00000558847 VAMP1P23763 118 aa7.24□□□□□ -1.25
CASC4-206ENST00000558847 ATP11AP98196 1134 aa7.24□□□□□ -1.25
CASC4-206ENST00000558847 ATP2B2Q01814 1243 aa7.24□□□□□ -1.25
CASC4-206ENST00000558847 PLCB3Q01970 1234 aa7.24□□□□□ -1.25
CASC4-206ENST00000558847 PRR23CQ6ZRP0 262 aa7.24□□□□□ -1.25
CASC4-206ENST00000558847 CEP120Q8N960 986 aa7.24□□□□□ -1.25
CASC4-206ENST00000558847 ALKBH8Q96BT7 664 aaKnown RBP7.24□□□□□ -1.25
CASC4-206ENST00000558847 MRRFQ96E11 262 aaKnown RBP7.24□□□□□ -1.25
CASC4-206ENST00000558847 MRPL18Q9H0U6 180 aaKnown RBP7.24□□□□□ -1.25
CASC4-206ENST00000558847 ACPPP15309 386 aa7.23□□□□□ -1.25
CASC4-206ENST00000558847 CES1P23141 567 aa7.23□□□□□ -1.25
CASC4-206ENST00000558847 FMR1Q06787 632 aaKnown RBP eCLIP7.23□□□□□ -1.25
CASC4-206ENST00000558847 DCAF11Q8TEB1 546 aa7.23□□□□□ -1.25
CASC4-206ENST00000558847 ORC1Q13415 861 aa7.22□□□□□ -1.25
CASC4-206ENST00000558847 ADAMTSL4Q6UY14 1074 aa7.22□□□□□ -1.25
CASC4-206ENST00000558847 RASSF4Q9H2L5 321 aa7.22□□□□□ -1.25
CASC4-206ENST00000558847 ZFYVE28Q9HCC9 887 aa7.22□□□□□ -1.25
CASC4-206ENST00000558847 RNF112Q9ULX5 631 aa7.22□□□□□ -1.25
CASC4-206ENST00000558847 UNCXA6NJT0 531 aa7.21□□□□□ -1.26
CASC4-206ENST00000558847 GLB1P16278 677 aa7.21□□□□□ -1.26
CASC4-206ENST00000558847 USPL1Q5W0Q7 1092 aa7.21□□□□□ -1.26
CASC4-206ENST00000558847 NCAPG2Q86XI2 1143 aa7.21□□□□□ -1.26
CASC4-206ENST00000558847 SPACA7Q96KW9 195 aa7.21□□□□□ -1.26
CASC4-206ENST00000558847 SRA1Q9HD15 236 aaKnown RBP7.21□□□□□ -1.26
CASC4-206ENST00000558847 TRIM33Q9UPN9 1127 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms