RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 FBXW7Q969H0 707 aa19.73■□□□□ 0.75
CPNE6-208ENST00000558795 SPEF2Q9C093 1822 aa19.73■□□□□ 0.75
CPNE6-208ENST00000558795 NF2P35240 595 aa19.72■□□□□ 0.75
CPNE6-208ENST00000558795 PKN2Q16513 984 aaKnown RBP19.72■□□□□ 0.75
CPNE6-208ENST00000558795 NBPF9Q3BBW0 867 aa19.72■□□□□ 0.75
CPNE6-208ENST00000558795 CCDC30Q5VVM6 783 aa19.72■□□□□ 0.75
CPNE6-208ENST00000558795 HPS5Q9UPZ3 1129 aa19.72■□□□□ 0.75
CPNE6-208ENST00000558795 MAP3K2Q9Y2U5 619 aa19.72■□□□□ 0.75
CPNE6-208ENST00000558795 MYH3P11055 1940 aa19.72■□□□□ 0.75
CPNE6-208ENST00000558795 TNRC18O15417 2968 aaPredicted RBP19.71■□□□□ 0.75
CPNE6-208ENST00000558795 APAF1O14727 1248 aa19.71■□□□□ 0.75
CPNE6-208ENST00000558795 TBC1D8O95759 1140 aa19.71■□□□□ 0.75
CPNE6-208ENST00000558795 PRAMEF18Q5VWM3 479 aa19.71■□□□□ 0.75
CPNE6-208ENST00000558795 MYO3BQ8WXR4 1341 aa19.71■□□□□ 0.75
CPNE6-208ENST00000558795 NEXNQ0ZGT2 675 aa19.7■□□□□ 0.74
CPNE6-208ENST00000558795 DACT2Q5SW24 774 aa19.7■□□□□ 0.74
CPNE6-208ENST00000558795 C8orf58Q8NAV2 365 aa19.7■□□□□ 0.74
CPNE6-208ENST00000558795 ZNF296Q8WUU4 475 aaPredicted RBP19.7■□□□□ 0.74
CPNE6-208ENST00000558795 BSDC1Q9NW68 430 aaPredicted RBP19.7■□□□□ 0.74
CPNE6-208ENST00000558795 MINPP1Q9UNW1 487 aa19.7■□□□□ 0.74
CPNE6-208ENST00000558795 CCT4P50991 539 aaKnown RBP19.69■□□□□ 0.74
CPNE6-208ENST00000558795 TTLL11Q8NHH1 800 aa19.69■□□□□ 0.74
CPNE6-208ENST00000558795 MXD3Q9BW11 206 aa19.69■□□□□ 0.74
CPNE6-208ENST00000558795 GREM2Q9H772 168 aa19.69■□□□□ 0.74
CPNE6-208ENST00000558795 WTIPA6NIX2 430 aaPredicted RBP19.68■□□□□ 0.74
CPNE6-208ENST00000558795 WNT10BO00744 389 aa19.68■□□□□ 0.74
CPNE6-208ENST00000558795 MKRN3Q13064 507 aaKnown RBP19.68■□□□□ 0.74
CPNE6-208ENST00000558795 STRIP1Q5VSL9 837 aa19.68■□□□□ 0.74
CPNE6-208ENST00000558795 KSR2Q6VAB6 950 aa19.68■□□□□ 0.74
CPNE6-208ENST00000558795 COA1Q9GZY4 146 aa19.68■□□□□ 0.74
CPNE6-208ENST00000558795 PI4KAP2A4QPH2 592 aa19.67■□□□□ 0.74
CPNE6-208ENST00000558795 SASH1O94885 1247 aa19.67■□□□□ 0.74
CPNE6-208ENST00000558795 IGKV5-2P06315 115 aa19.67■□□□□ 0.74
CPNE6-208ENST00000558795 TM4SF4P48230 202 aa19.67■□□□□ 0.74
CPNE6-208ENST00000558795 SREBF2Q12772 1141 aa19.67■□□□□ 0.74
CPNE6-208ENST00000558795 PRPF38BQ5VTL8 546 aaKnown RBP19.67■□□□□ 0.74
CPNE6-208ENST00000558795 PI4KAP1Q8N8J0 262 aa19.67■□□□□ 0.74
CPNE6-208ENST00000558795 ZNF646O15015 1829 aaPredicted RBP19.67■□□□□ 0.74
CPNE6-208ENST00000558795 GPR25O00155 361 aa19.66■□□□□ 0.74
CPNE6-208ENST00000558795 IGHMBP2P38935 993 aaKnown RBP19.66■□□□□ 0.74
CPNE6-208ENST00000558795 MMP14P50281 582 aa19.66■□□□□ 0.74
CPNE6-208ENST00000558795 ARMC9Q7Z3E5 817 aa19.66■□□□□ 0.74
CPNE6-208ENST00000558795 APOBEC3FQ8IUX4 373 aaKnown RBP19.66■□□□□ 0.74
CPNE6-208ENST00000558795 STK31Q9BXU1 1019 aa19.66■□□□□ 0.74
CPNE6-208ENST00000558795 LEMD3Q9Y2U8 911 aa19.66■□□□□ 0.74
CPNE6-208ENST00000558795 PRKG1Q13976 671 aa19.65■□□□□ 0.74
CPNE6-208ENST00000558795 NOM1Q5C9Z4 860 aaKnown RBP19.65■□□□□ 0.74
CPNE6-208ENST00000558795 CWF19L2Q2TBE0 894 aaKnown RBP19.64■□□□□ 0.73
CPNE6-208ENST00000558795 TTLL5Q6EMB2 1281 aa19.64■□□□□ 0.73
CPNE6-208ENST00000558795 UBE3BQ7Z3V4 1068 aa19.64■□□□□ 0.73
CPNE6-208ENST00000558795 ZNF804BA4D1E1 1349 aa19.63■□□□□ 0.73
CPNE6-208ENST00000558795 PTPN12Q05209 780 aaKnown RBP19.63■□□□□ 0.73
CPNE6-208ENST00000558795 FBXO46Q6PJ61 603 aaPredicted RBP19.63■□□□□ 0.73
CPNE6-208ENST00000558795 TXNRD3Q86VQ6 643 aa19.63■□□□□ 0.73
CPNE6-208ENST00000558795 KIAA0825Q8IV33 1275 aa19.63■□□□□ 0.73
CPNE6-208ENST00000558795 TSPYL6Q8N831 410 aa19.63■□□□□ 0.73
CPNE6-208ENST00000558795 ANKRD2Q9GZV1 360 aa19.63■□□□□ 0.73
CPNE6-208ENST00000558795 NEURL1BA8MQ27 555 aa19.62■□□□□ 0.73
CPNE6-208ENST00000558795 FKTNO75072 461 aa19.62■□□□□ 0.73
CPNE6-208ENST00000558795 KCNJ4P48050 445 aa19.62■□□□□ 0.73
CPNE6-208ENST00000558795 MPHOSPH8Q99549 860 aa19.62■□□□□ 0.73
CPNE6-208ENST00000558795 ITGA6P23229 1130 aa19.61■□□□□ 0.73
CPNE6-208ENST00000558795 GTF2IP78347 998 aa19.61■□□□□ 0.73
CPNE6-208ENST00000558795 ANGEL1Q9UNK9 670 aaKnown RBP19.61■□□□□ 0.73
CPNE6-208ENST00000558795 H7C1W4 665 aa19.6■□□□□ 0.73
CPNE6-208ENST00000558795 ALDH1A1P00352 501 aa19.6■□□□□ 0.73
CPNE6-208ENST00000558795 KLRK1P26718 216 aa19.6■□□□□ 0.73
CPNE6-208ENST00000558795 CFHR5Q9BXR6 569 aa19.6■□□□□ 0.73
CPNE6-208ENST00000558795 COL1A1P02452 1464 aaPredicted RBP19.6■□□□□ 0.73
CPNE6-208ENST00000558795 LDLRAD1Q5T700 205 aa19.59■□□□□ 0.73
CPNE6-208ENST00000558795 SPRYD7Q5W111 196 aa19.59■□□□□ 0.73
CPNE6-208ENST00000558795 TSR2Q969E8 191 aaKnown RBP19.59■□□□□ 0.73
CPNE6-208ENST00000558795 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.59■□□□□ 0.73
CPNE6-208ENST00000558795 DLGAP5Q15398 846 aa19.58■□□□□ 0.72
CPNE6-208ENST00000558795 SLC10A4Q96EP9 437 aa19.58■□□□□ 0.72
CPNE6-208ENST00000558795 ZBED3Q96IU2 234 aaPredicted RBP19.58■□□□□ 0.72
CPNE6-208ENST00000558795 PLA2G12BQ9BX93 195 aa19.58■□□□□ 0.72
CPNE6-208ENST00000558795 MYH16Q9H6N6 1097 aa19.58■□□□□ 0.72
CPNE6-208ENST00000558795 MANSC4A6NHS7 340 aaPredicted RBP19.57■□□□□ 0.72
CPNE6-208ENST00000558795 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
CPNE6-208ENST00000558795 INHBEP58166 350 aa19.57■□□□□ 0.72
CPNE6-208ENST00000558795 CHRNDQ07001 517 aa19.57■□□□□ 0.72
CPNE6-208ENST00000558795 GCKRQ14397 625 aa19.57■□□□□ 0.72
CPNE6-208ENST00000558795 TWISTNBQ3B726 338 aaPredicted RBP19.57■□□□□ 0.72
CPNE6-208ENST00000558795 G2E3Q7L622 706 aa19.57■□□□□ 0.72
CPNE6-208ENST00000558795 DEFB129Q9H1M3 183 aa19.57■□□□□ 0.72
CPNE6-208ENST00000558795 R3HDMLQ9H3Y0 253 aa19.57■□□□□ 0.72
CPNE6-208ENST00000558795 PPP1R12BO60237 982 aaPredicted RBP19.56■□□□□ 0.72
CPNE6-208ENST00000558795 CD209Q9NNX6 404 aa19.56■□□□□ 0.72
CPNE6-208ENST00000558795 FZD1Q9UP38 647 aa19.56■□□□□ 0.72
CPNE6-208ENST00000558795 ECM29Q5VYK3 1845 aa19.55■□□□□ 0.72
CPNE6-208ENST00000558795 ANKRD18BA2A2Z9 1011 aa19.55■□□□□ 0.72
CPNE6-208ENST00000558795 MYO1BO43795 1136 aa19.55■□□□□ 0.72
CPNE6-208ENST00000558795 PPP2R3BQ9Y5P8 575 aa19.55■□□□□ 0.72
CPNE6-208ENST00000558795 CSF1RP07333 972 aa19.54■□□□□ 0.72
CPNE6-208ENST00000558795 ZBTB48P10074 688 aaPredicted RBP19.54■□□□□ 0.72
CPNE6-208ENST00000558795 FLIIQ13045 1269 aa19.54■□□□□ 0.72
CPNE6-208ENST00000558795 FKBP5Q13451 457 aaPredicted RBP19.54■□□□□ 0.72
CPNE6-208ENST00000558795 IFNL1Q8IU54 200 aa19.54■□□□□ 0.72
CPNE6-208ENST00000558795 TRIM17Q9Y577 477 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms