RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CCDC152Q4G0S7 254 aa19.52■□□□□ 0.72
LINC01220-201ENST00000558575 GRAPLQ8TC17 118 aaPredicted RBP19.52■□□□□ 0.72
LINC01220-201ENST00000558575 PANK1Q8TE04 598 aa19.52■□□□□ 0.72
LINC01220-201ENST00000558575 MEIS3Q99687 375 aa19.52■□□□□ 0.72
LINC01220-201ENST00000558575 GREM2Q9H772 168 aa19.52■□□□□ 0.72
LINC01220-201ENST00000558575 BBOX1O75936 387 aa19.51■□□□□ 0.71
LINC01220-201ENST00000558575 DUOX1Q9NRD9 1551 aa19.51■□□□□ 0.71
LINC01220-201ENST00000558575 RAD17O75943 681 aa19.5■□□□□ 0.71
LINC01220-201ENST00000558575 LMBR1LQ6UX01 489 aa19.5■□□□□ 0.71
LINC01220-201ENST00000558575 ANKRD44Q8N8A2 993 aa19.5■□□□□ 0.71
LINC01220-201ENST00000558575 LRRC37AA6NMS7 1700 aa19.5■□□□□ 0.71
LINC01220-201ENST00000558575 RTL9Q8NET4 1388 aa19.49■□□□□ 0.71
LINC01220-201ENST00000558575 RPS8P62241 208 aaKnown RBP19.49■□□□□ 0.71
LINC01220-201ENST00000558575 C20orf194Q5TEA3 1177 aa19.49■□□□□ 0.71
LINC01220-201ENST00000558575 BICC1Q9H694 974 aaKnown RBP19.49■□□□□ 0.71
LINC01220-201ENST00000558575 RABL6Q3YEC7 729 aaPredicted RBP19.48■□□□□ 0.71
LINC01220-201ENST00000558575 HABP4Q5JVS0 413 aaKnown RBP19.48■□□□□ 0.71
LINC01220-201ENST00000558575 CSRNP1Q96S65 589 aa19.48■□□□□ 0.71
LINC01220-201ENST00000558575 RTFDC1Q9BY42 306 aaPredicted RBP19.48■□□□□ 0.71
LINC01220-201ENST00000558575 VPS33BQ9H267 617 aa19.48■□□□□ 0.71
LINC01220-201ENST00000558575 GBA2Q9HCG7 927 aaPredicted RBP19.48■□□□□ 0.71
LINC01220-201ENST00000558575 CNOT7Q9UIV1 285 aaKnown RBP19.48■□□□□ 0.71
LINC01220-201ENST00000558575 ATP6V0A2Q9Y487 856 aa19.48■□□□□ 0.71
LINC01220-201ENST00000558575 ZBTB7BO15156 539 aaPredicted RBP19.47■□□□□ 0.71
LINC01220-201ENST00000558575 ITGA6P23229 1130 aa19.47■□□□□ 0.71
LINC01220-201ENST00000558575 ZNF157P51786 506 aaPredicted RBP19.47■□□□□ 0.71
LINC01220-201ENST00000558575 SP8Q8IXZ3 490 aa19.47■□□□□ 0.71
LINC01220-201ENST00000558575 FTSJ3Q8IY81 847 aaKnown RBP19.47■□□□□ 0.71
LINC01220-201ENST00000558575 CCDC102AQ96A19 550 aa19.47■□□□□ 0.71
LINC01220-201ENST00000558575 RBBP6Q7Z6E9 1792 aaKnown RBP19.47■□□□□ 0.71
LINC01220-201ENST00000558575 YDJCA8MPS7 323 aa19.46■□□□□ 0.71
LINC01220-201ENST00000558575 ADM5C9JUS6 153 aa19.46■□□□□ 0.71
LINC01220-201ENST00000558575 SLC10A3P09131 477 aa19.46■□□□□ 0.71
LINC01220-201ENST00000558575 UBTFL1P0CB47 393 aaPredicted RBP19.46■□□□□ 0.71
LINC01220-201ENST00000558575 MICALL2Q8IY33 904 aa19.46■□□□□ 0.71
LINC01220-201ENST00000558575 GCC1Q96CN9 775 aa19.46■□□□□ 0.71
LINC01220-201ENST00000558575 SCN9AQ15858 1988 aa19.46■□□□□ 0.71
LINC01220-201ENST00000558575 PAPPA2Q9BXP8 1791 aa19.45■□□□□ 0.7
LINC01220-201ENST00000558575 EGFRP00533 1210 aa19.45■□□□□ 0.7
LINC01220-201ENST00000558575 KIAA2012Q0VF49 1180 aa19.45■□□□□ 0.7
LINC01220-201ENST00000558575 SAMD7Q7Z3H4 446 aa19.45■□□□□ 0.7
LINC01220-201ENST00000558575 LRRFIP2Q9Y608 721 aaKnown RBP19.45■□□□□ 0.7
LINC01220-201ENST00000558575 GNAI3P08754 354 aa19.44■□□□□ 0.7
LINC01220-201ENST00000558575 PDE3AQ14432 1141 aa19.44■□□□□ 0.7
LINC01220-201ENST00000558575 TNIP1Q15025 636 aa19.44■□□□□ 0.7
LINC01220-201ENST00000558575 KRT26Q7Z3Y9 468 aa19.44■□□□□ 0.7
LINC01220-201ENST00000558575 ITPRIPQ8IWB1 547 aa19.44■□□□□ 0.7
LINC01220-201ENST00000558575 C2orf69Q8N8R5 385 aa19.44■□□□□ 0.7
LINC01220-201ENST00000558575 COG6Q9Y2V7 657 aa19.44■□□□□ 0.7
LINC01220-201ENST00000558575 ZBTB12Q9Y330 459 aaPredicted RBP19.44■□□□□ 0.7
LINC01220-201ENST00000558575 CEP290O15078 2479 aa19.43■□□□□ 0.7
LINC01220-201ENST00000558575 MS4A1P11836 297 aa19.43■□□□□ 0.7
LINC01220-201ENST00000558575 TMC4Q7Z404 712 aa19.43■□□□□ 0.7
LINC01220-201ENST00000558575 ANKRD18AQ8IVF6 992 aa19.43■□□□□ 0.7
LINC01220-201ENST00000558575 SUPT20HQ8NEM7 779 aa19.43■□□□□ 0.7
LINC01220-201ENST00000558575 ZNF594Q96JF6 807 aaPredicted RBP19.43■□□□□ 0.7
LINC01220-201ENST00000558575 CDC5LQ99459 802 aaKnown RBP19.43■□□□□ 0.7
LINC01220-201ENST00000558575 CHMP3Q9Y3E7 222 aa19.43■□□□□ 0.7
LINC01220-201ENST00000558575 ANKRD18BA2A2Z9 1011 aa19.42■□□□□ 0.7
LINC01220-201ENST00000558575 H7C1D1 291 aa19.42■□□□□ 0.7
LINC01220-201ENST00000558575 RFX5P48382 616 aaPredicted RBP19.42■□□□□ 0.7
LINC01220-201ENST00000558575 RRP1P56182 461 aaKnown RBP19.42■□□□□ 0.7
LINC01220-201ENST00000558575 IFIT5Q13325 482 aaKnown RBP19.42■□□□□ 0.7
LINC01220-201ENST00000558575 TBC1D10BQ4KMP7 808 aaPredicted RBP19.42■□□□□ 0.7
LINC01220-201ENST00000558575 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.42■□□□□ 0.7
LINC01220-201ENST00000558575 BSDC1Q9NW68 430 aaPredicted RBP19.42■□□□□ 0.7
LINC01220-201ENST00000558575 MKI67P46013 3256 aaKnown RBP19.42■□□□□ 0.7
LINC01220-201ENST00000558575 PSME4Q14997 1843 aa19.41■□□□□ 0.7
LINC01220-201ENST00000558575 KIAA0100Q14667 2235 aaKnown RBP19.41■□□□□ 0.7
LINC01220-201ENST00000558575 GPSM2P81274 684 aa19.41■□□□□ 0.7
LINC01220-201ENST00000558575 MVPQ14764 893 aaKnown RBP19.41■□□□□ 0.7
LINC01220-201ENST00000558575 DPP8Q6V1X1 898 aaPredicted RBP19.41■□□□□ 0.7
LINC01220-201ENST00000558575 MINPP1Q9UNW1 487 aa19.41■□□□□ 0.7
LINC01220-201ENST00000558575 WTIPA6NIX2 430 aaPredicted RBP19.4■□□□□ 0.7
LINC01220-201ENST00000558575 GNAI2P04899 355 aa19.4■□□□□ 0.7
LINC01220-201ENST00000558575 PKN2Q16513 984 aaKnown RBP19.4■□□□□ 0.7
LINC01220-201ENST00000558575 CCDC57Q2TAC2 916 aa19.4■□□□□ 0.7
LINC01220-201ENST00000558575 RASAL3Q86YV0 1011 aa19.4■□□□□ 0.7
LINC01220-201ENST00000558575 MPNDQ8N594 471 aa19.4■□□□□ 0.7
LINC01220-201ENST00000558575 ZNF296Q8WUU4 475 aaPredicted RBP19.4■□□□□ 0.7
LINC01220-201ENST00000558575 MYH3P11055 1940 aa19.4■□□□□ 0.7
LINC01220-201ENST00000558575 KLHDC4Q8TBB5 520 aa19.39■□□□□ 0.69
LINC01220-201ENST00000558575 PUS3Q9BZE2 481 aaKnown RBP19.39■□□□□ 0.69
LINC01220-201ENST00000558575 TMX4Q9H1E5 349 aaPredicted RBP19.39■□□□□ 0.69
LINC01220-201ENST00000558575 C1orf115Q9H7X2 142 aa19.39■□□□□ 0.69
LINC01220-201ENST00000558575 HTTP42858 3142 aa19.38■□□□□ 0.69
LINC01220-201ENST00000558575 IGHMBP2P38935 993 aaKnown RBP19.38■□□□□ 0.69
LINC01220-201ENST00000558575 MTX1Q13505 466 aa19.38■□□□□ 0.69
LINC01220-201ENST00000558575 DPF2Q92785 391 aa19.38■□□□□ 0.69
LINC01220-201ENST00000558575 TRIOBPQ9H2D6 2365 aa19.38■□□□□ 0.69
LINC01220-201ENST00000558575 POLLQ9UGP5 575 aa19.38■□□□□ 0.69
LINC01220-201ENST00000558575 NSFL1CQ9UNZ2 370 aaKnown RBP19.38■□□□□ 0.69
LINC01220-201ENST00000558575 HDAC5Q9UQL6 1122 aa19.38■□□□□ 0.69
LINC01220-201ENST00000558575 ASTN2O75129 1339 aaPredicted RBP19.37■□□□□ 0.69
LINC01220-201ENST00000558575 PSMD14O00487 310 aa19.37■□□□□ 0.69
LINC01220-201ENST00000558575 TBC1D8O95759 1140 aa19.37■□□□□ 0.69
LINC01220-201ENST00000558575 FXR1P51114 621 aaKnown RBP eCLIP19.37■□□□□ 0.69
LINC01220-201ENST00000558575 PTPN12Q05209 780 aaKnown RBP19.37■□□□□ 0.69
LINC01220-201ENST00000558575 MPHOSPH8Q99549 860 aa19.37■□□□□ 0.69
LINC01220-201ENST00000558575 ZBTB40Q9NUA8 1239 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms