RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 RASAL3Q86YV0 1011 aa16.99■□□□□ 0.31
TMED3-205ENST00000558562 HPS5Q9UPZ3 1129 aa16.99■□□□□ 0.31
TMED3-205ENST00000558562 SCN9AQ15858 1988 aa16.98■□□□□ 0.31
TMED3-205ENST00000558562 ATP5J2-PTCD1G3V325 749 aa16.98■□□□□ 0.31
TMED3-205ENST00000558562 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
TMED3-205ENST00000558562 TBC1D16Q8TBP0 767 aa16.98■□□□□ 0.31
TMED3-205ENST00000558562 EYA3Q99504 573 aa16.98■□□□□ 0.31
TMED3-205ENST00000558562 SCAF8Q9UPN6 1271 aaKnown RBP16.98■□□□□ 0.31
TMED3-205ENST00000558562 VIL1P09327 827 aaKnown RBP16.97■□□□□ 0.31
TMED3-205ENST00000558562 AAMPQ13685 434 aa16.97■□□□□ 0.31
TMED3-205ENST00000558562 SF3B3Q15393 1217 aaKnown RBP16.97■□□□□ 0.31
TMED3-205ENST00000558562 ANGEL2Q5VTE6 544 aaKnown RBP16.97■□□□□ 0.31
TMED3-205ENST00000558562 ARHGAP45Q92619 1136 aa16.97■□□□□ 0.31
TMED3-205ENST00000558562 CHPF2Q9P2E5 772 aa16.97■□□□□ 0.31
TMED3-205ENST00000558562 SCARF1Q14162 830 aa16.96■□□□□ 0.31
TMED3-205ENST00000558562 MOB2Q70IA6 237 aa16.96■□□□□ 0.31
TMED3-205ENST00000558562 ZC3H12CQ9C0D7 883 aaKnown RBP16.96■□□□□ 0.31
TMED3-205ENST00000558562 G3V3G9 751 aa16.95■□□□□ 0.3
TMED3-205ENST00000558562 TBC1D8O95759 1140 aa16.95■□□□□ 0.3
TMED3-205ENST00000558562 DCAF8Q5TAQ9 597 aa16.95■□□□□ 0.3
TMED3-205ENST00000558562 API5Q9BZZ5 524 aaKnown RBP16.95■□□□□ 0.3
TMED3-205ENST00000558562 HDAC9Q9UKV0 1011 aa16.95■□□□□ 0.3
TMED3-205ENST00000558562 UFL1O94874 794 aa16.94■□□□□ 0.3
TMED3-205ENST00000558562 RPS8P62241 208 aaKnown RBP16.94■□□□□ 0.3
TMED3-205ENST00000558562 ANKRD13DQ6ZTN6 518 aa16.94■□□□□ 0.3
TMED3-205ENST00000558562 ITPRIPQ8IWB1 547 aa16.94■□□□□ 0.3
TMED3-205ENST00000558562 TMEM57Q8N5G2 664 aa16.94■□□□□ 0.3
TMED3-205ENST00000558562 PLBD2Q8NHP8 589 aa16.94■□□□□ 0.3
TMED3-205ENST00000558562 ZNF296Q8WUU4 475 aaPredicted RBP16.94■□□□□ 0.3
TMED3-205ENST00000558562 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
TMED3-205ENST00000558562 UBE2Q2LH0YL09 131 aa16.93■□□□□ 0.3
TMED3-205ENST00000558562 IRS4O14654 1257 aaPredicted RBP16.93■□□□□ 0.3
TMED3-205ENST00000558562 ZNF280AP59817 542 aaPredicted RBP16.93■□□□□ 0.3
TMED3-205ENST00000558562 PRAMEF18Q5VWM3 479 aa16.93■□□□□ 0.3
TMED3-205ENST00000558562 REM2Q8IYK8 340 aaPredicted RBP16.93■□□□□ 0.3
TMED3-205ENST00000558562 SEC31BQ9NQW1 1179 aa16.93■□□□□ 0.3
TMED3-205ENST00000558562 ANKIB1Q9P2G1 1089 aa16.93■□□□□ 0.3
TMED3-205ENST00000558562 DDX19BQ9UMR2 479 aa16.93■□□□□ 0.3
TMED3-205ENST00000558562 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
TMED3-205ENST00000558562 RSBN1LQ6PCB5 846 aaPredicted RBP16.92■□□□□ 0.3
TMED3-205ENST00000558562 PTPRCP08575 1304 aa16.92■□□□□ 0.3
TMED3-205ENST00000558562 MKRN3Q13064 507 aaKnown RBP16.91■□□□□ 0.3
TMED3-205ENST00000558562 HDGFL1Q5TGJ6 251 aa16.91■□□□□ 0.3
TMED3-205ENST00000558562 CENPQQ7L2Z9 268 aaPredicted RBP16.91■□□□□ 0.3
TMED3-205ENST00000558562 STK31Q9BXU1 1019 aa16.91■□□□□ 0.3
TMED3-205ENST00000558562 MYOZ2Q9NPC6 264 aa16.91■□□□□ 0.3
TMED3-205ENST00000558562 PAPPA2Q9BXP8 1791 aa16.91■□□□□ 0.3
TMED3-205ENST00000558562 HOXB7P09629 217 aa16.9■□□□□ 0.3
TMED3-205ENST00000558562 FKBP1BP68106 108 aa16.9■□□□□ 0.3
TMED3-205ENST00000558562 PKN2Q16513 984 aaKnown RBP16.9■□□□□ 0.3
TMED3-205ENST00000558562 AGBL3Q8NEM8 1001 aa16.9■□□□□ 0.3
TMED3-205ENST00000558562 PODXL2Q9NZ53 605 aa16.9■□□□□ 0.3
TMED3-205ENST00000558562 GGA1Q9UJY5 639 aa16.9■□□□□ 0.3
TMED3-205ENST00000558562 USP17L8P0C7I0 530 aa16.89■□□□□ 0.29
TMED3-205ENST00000558562 TTLL12Q14166 644 aaPredicted RBP16.89■□□□□ 0.29
TMED3-205ENST00000558562 CCDC85AQ96PX6 553 aaPredicted RBP16.89■□□□□ 0.29
TMED3-205ENST00000558562 GMLQ99445 158 aa16.89■□□□□ 0.29
TMED3-205ENST00000558562 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
TMED3-205ENST00000558562 JARID2Q92833 1246 aaPredicted RBP16.88■□□□□ 0.29
TMED3-205ENST00000558562 CHMP4AQ9BY43 222 aa16.88■□□□□ 0.29
TMED3-205ENST00000558562 CHMP4BQ9H444 224 aaKnown RBP16.88■□□□□ 0.29
TMED3-205ENST00000558562 WTIPA6NIX2 430 aaPredicted RBP16.87■□□□□ 0.29
TMED3-205ENST00000558562 GPR25O00155 361 aa16.87■□□□□ 0.29
TMED3-205ENST00000558562 NBPF9Q3BBW0 867 aa16.87■□□□□ 0.29
TMED3-205ENST00000558562 R3HDMLQ9H3Y0 253 aa16.87■□□□□ 0.29
TMED3-205ENST00000558562 DBF4Q9UBU7 674 aaPredicted RBP16.87■□□□□ 0.29
TMED3-205ENST00000558562 PITPNM2Q9BZ72 1349 aa16.87■□□□□ 0.29
TMED3-205ENST00000558562 TM4SF4P48230 202 aa16.86■□□□□ 0.29
TMED3-205ENST00000558562 TRIM28Q13263 835 aaKnown RBP16.86■□□□□ 0.29
TMED3-205ENST00000558562 FBXO46Q6PJ61 603 aaPredicted RBP16.86■□□□□ 0.29
TMED3-205ENST00000558562 ZBTB38Q8NAP3 1195 aaPredicted RBP16.86■□□□□ 0.29
TMED3-205ENST00000558562 MXD3Q9BW11 206 aa16.86■□□□□ 0.29
TMED3-205ENST00000558562 PSME4Q14997 1843 aa16.86■□□□□ 0.29
TMED3-205ENST00000558562 ZNF609O15014 1411 aa16.86■□□□□ 0.29
TMED3-205ENST00000558562 MKI67P46013 3256 aaKnown RBP16.85■□□□□ 0.29
TMED3-205ENST00000558562 USP17L3A6NCW0 530 aa16.85■□□□□ 0.29
TMED3-205ENST00000558562 USP17L4A6NCW7 530 aa16.85■□□□□ 0.29
TMED3-205ENST00000558562 PRKG1Q13976 671 aa16.85■□□□□ 0.29
TMED3-205ENST00000558562 G2E3Q7L622 706 aa16.85■□□□□ 0.29
TMED3-205ENST00000558562 USP17L1Q7RTZ2 530 aa16.85■□□□□ 0.29
TMED3-205ENST00000558562 RIC3Q7Z5B4 369 aa16.85■□□□□ 0.29
TMED3-205ENST00000558562 HYPKQ9NX55 129 aa16.85■□□□□ 0.29
TMED3-205ENST00000558562 PCDHB15Q9Y5E8 787 aa16.85■□□□□ 0.29
TMED3-205ENST00000558562 CCDC152Q4G0S7 254 aa16.84■□□□□ 0.29
TMED3-205ENST00000558562 XDHP47989 1333 aa16.84■□□□□ 0.29
TMED3-205ENST00000558562 FKTNO75072 461 aa16.83■□□□□ 0.28
TMED3-205ENST00000558562 IGHDP01880 384 aa16.83■□□□□ 0.28
TMED3-205ENST00000558562 FLIIQ13045 1269 aa16.83■□□□□ 0.28
TMED3-205ENST00000558562 INTS3Q68E01 1043 aaKnown RBP16.83■□□□□ 0.28
TMED3-205ENST00000558562 FBXW7Q969H0 707 aa16.83■□□□□ 0.28
TMED3-205ENST00000558562 MYD88Q99836 296 aa16.83■□□□□ 0.28
TMED3-205ENST00000558562 ZBTB40Q9NUA8 1239 aa16.83■□□□□ 0.28
TMED3-205ENST00000558562 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.83■□□□□ 0.28
TMED3-205ENST00000558562 PTPN12Q05209 780 aaKnown RBP16.82■□□□□ 0.28
TMED3-205ENST00000558562 PODNQ7Z5L7 613 aa16.82■□□□□ 0.28
TMED3-205ENST00000558562 ANKRD18AQ8IVF6 992 aa16.82■□□□□ 0.28
TMED3-205ENST00000558562 RWDD1Q9H446 243 aaPredicted RBP16.82■□□□□ 0.28
TMED3-205ENST00000558562 PHAXQ9H814 394 aaKnown RBP16.82■□□□□ 0.28
TMED3-205ENST00000558562 HTTP42858 3142 aa16.82■□□□□ 0.28
TMED3-205ENST00000558562 CENPFP49454 3210 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms