RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 AK9Q5TCS8 1911 aa18.15■□□□□ 0.5
VPS18-202ENST00000558474 GSPT1P15170 499 aaKnown RBP18.14■□□□□ 0.49
VPS18-202ENST00000558474 ARID4AP29374 1257 aaPredicted RBP18.14■□□□□ 0.49
VPS18-202ENST00000558474 GPSM2P81274 684 aa18.14■□□□□ 0.49
VPS18-202ENST00000558474 TTC39AQ5SRH9 613 aa18.14■□□□□ 0.49
VPS18-202ENST00000558474 SOGA3Q5TF21 947 aa18.14■□□□□ 0.49
VPS18-202ENST00000558474 C7orf43Q8WVR3 580 aa18.14■□□□□ 0.49
VPS18-202ENST00000558474 PIM2Q9P1W9 311 aa18.14■□□□□ 0.49
VPS18-202ENST00000558474 GGA1Q9UJY5 639 aa18.14■□□□□ 0.49
VPS18-202ENST00000558474 NSFL1CQ9UNZ2 370 aaKnown RBP18.14■□□□□ 0.49
VPS18-202ENST00000558474 ADORA1P30542 326 aa18.13■□□□□ 0.49
VPS18-202ENST00000558474 CCDC102BQ68D86 513 aa18.13■□□□□ 0.49
VPS18-202ENST00000558474 CNTROBQ8N137 903 aa18.13■□□□□ 0.49
VPS18-202ENST00000558474 HAUS7Q99871 368 aa18.13■□□□□ 0.49
VPS18-202ENST00000558474 GNL3LQ9NVN8 582 aaKnown RBP18.13■□□□□ 0.49
VPS18-202ENST00000558474 A0A0G2JLW4 131 aa18.12■□□□□ 0.49
VPS18-202ENST00000558474 SEMA3EO15041 775 aa18.12■□□□□ 0.49
VPS18-202ENST00000558474 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
VPS18-202ENST00000558474 FBXO33Q7Z6M2 555 aa18.12■□□□□ 0.49
VPS18-202ENST00000558474 MPNDQ8N594 471 aa18.12■□□□□ 0.49
VPS18-202ENST00000558474 EVI5LQ96CN4 794 aa18.12■□□□□ 0.49
VPS18-202ENST00000558474 IRS2Q9Y4H2 1338 aa18.12■□□□□ 0.49
VPS18-202ENST00000558474 MED23Q9ULK4 1368 aa18.12■□□□□ 0.49
VPS18-202ENST00000558474 AKAP11Q9UKA4 1901 aa18.11■□□□□ 0.49
VPS18-202ENST00000558474 SDSP20132 328 aa18.11■□□□□ 0.49
VPS18-202ENST00000558474 TSHZ3Q63HK5 1081 aa18.11■□□□□ 0.49
VPS18-202ENST00000558474 DPP8Q6V1X1 898 aaPredicted RBP18.11■□□□□ 0.49
VPS18-202ENST00000558474 SUPT20HQ8NEM7 779 aa18.11■□□□□ 0.49
VPS18-202ENST00000558474 TBC1D16Q8TBP0 767 aa18.11■□□□□ 0.49
VPS18-202ENST00000558474 EYA3Q99504 573 aa18.11■□□□□ 0.49
VPS18-202ENST00000558474 RTFDC1Q9BY42 306 aaPredicted RBP18.11■□□□□ 0.49
VPS18-202ENST00000558474 PDS5AQ29RF7 1337 aaKnown RBP18.11■□□□□ 0.49
VPS18-202ENST00000558474 SNED1Q8TER0 1413 aa18.1■□□□□ 0.49
VPS18-202ENST00000558474 RFX7Q2KHR2 1363 aa18.1■□□□□ 0.49
VPS18-202ENST00000558474 IGSF3O75054 1194 aa18.1■□□□□ 0.49
VPS18-202ENST00000558474 UFL1O94874 794 aa18.1■□□□□ 0.49
VPS18-202ENST00000558474 RTKN2Q8IZC4 609 aa18.1■□□□□ 0.49
VPS18-202ENST00000558474 FAM84BQ96KN1 310 aaPredicted RBP18.1■□□□□ 0.49
VPS18-202ENST00000558474 BOLA2Q9H3K6 86 aa18.1■□□□□ 0.49
VPS18-202ENST00000558474 MYH13Q9UKX3 1938 aa18.1■□□□□ 0.49
VPS18-202ENST00000558474 DUOX1Q9NRD9 1551 aa18.09■□□□□ 0.49
VPS18-202ENST00000558474 TRIM6-TRIM34B2RNG4 842 aa18.09■□□□□ 0.49
VPS18-202ENST00000558474 SNAP23O00161 211 aa18.09■□□□□ 0.49
VPS18-202ENST00000558474 HIBADHP31937 336 aaKnown RBP18.09■□□□□ 0.49
VPS18-202ENST00000558474 PHKA1P46020 1223 aa18.09■□□□□ 0.49
VPS18-202ENST00000558474 CCDC93Q567U6 631 aa18.09■□□□□ 0.49
VPS18-202ENST00000558474 DALRD3Q5D0E6 543 aaKnown RBP18.09■□□□□ 0.49
VPS18-202ENST00000558474 ZNF804AQ7Z570 1209 aa18.09■□□□□ 0.49
VPS18-202ENST00000558474 VPS37DQ86XT2 251 aa18.09■□□□□ 0.49
VPS18-202ENST00000558474 VPS33BQ9H267 617 aa18.09■□□□□ 0.49
VPS18-202ENST00000558474 POLLQ9UGP5 575 aa18.09■□□□□ 0.49
VPS18-202ENST00000558474 ARFGEF1Q9Y6D6 1849 aa18.09■□□□□ 0.49
VPS18-202ENST00000558474 HIP1O00291 1037 aa18.08■□□□□ 0.48
VPS18-202ENST00000558474 CDC45O75419 566 aa18.08■□□□□ 0.48
VPS18-202ENST00000558474 BCAMP50895 628 aa18.08■□□□□ 0.48
VPS18-202ENST00000558474 TTF1Q15361 905 aaPredicted RBP18.08■□□□□ 0.48
VPS18-202ENST00000558474 CASC1Q6TDU7 716 aa18.08■□□□□ 0.48
VPS18-202ENST00000558474 DENND2AQ9ULE3 1009 aa18.08■□□□□ 0.48
VPS18-202ENST00000558474 C6orf229H3BNL8 230 aa18.07■□□□□ 0.48
VPS18-202ENST00000558474 MCAMP43121 646 aa18.07■□□□□ 0.48
VPS18-202ENST00000558474 LRRFIP1Q32MZ4 808 aaKnown RBP18.07■□□□□ 0.48
VPS18-202ENST00000558474 RILPL2Q969X0 211 aa18.07■□□□□ 0.48
VPS18-202ENST00000558474 PSMD1Q99460 953 aa18.07■□□□□ 0.48
VPS18-202ENST00000558474 PAG1Q9NWQ8 432 aa18.07■□□□□ 0.48
VPS18-202ENST00000558474 PPP1R1BQ9UD71 204 aaPredicted RBP18.07■□□□□ 0.48
VPS18-202ENST00000558474 GYG1P46976 350 aa18.06■□□□□ 0.48
VPS18-202ENST00000558474 C8orf34Q49A92 452 aa18.06■□□□□ 0.48
VPS18-202ENST00000558474 SPATA5Q8NB90 893 aa18.06■□□□□ 0.48
VPS18-202ENST00000558474 ZC3H12CQ9C0D7 883 aaKnown RBP18.06■□□□□ 0.48
VPS18-202ENST00000558474 DOCK2Q92608 1830 aa18.05■□□□□ 0.48
VPS18-202ENST00000558474 C21orf2O43822 256 aa18.05■□□□□ 0.48
VPS18-202ENST00000558474 IL1R1P14778 569 aa18.05■□□□□ 0.48
VPS18-202ENST00000558474 TMED8Q6PL24 325 aaPredicted RBP18.05■□□□□ 0.48
VPS18-202ENST00000558474 KBTBD3Q8NAB2 608 aa18.05■□□□□ 0.48
VPS18-202ENST00000558474 BACH2Q9BYV9 841 aa18.05■□□□□ 0.48
VPS18-202ENST00000558474 COA1Q9GZY4 146 aa18.05■□□□□ 0.48
VPS18-202ENST00000558474 HMG20BQ9P0W2 317 aa18.05■□□□□ 0.48
VPS18-202ENST00000558474 FER1L6Q2WGJ9 1857 aa18.04■□□□□ 0.48
VPS18-202ENST00000558474 WTIPA6NIX2 430 aaPredicted RBP18.04■□□□□ 0.48
VPS18-202ENST00000558474 FKBP4Q02790 459 aaKnown RBP eCLIP18.04■□□□□ 0.48
VPS18-202ENST00000558474 RASGRF1Q13972 1273 aa18.04■□□□□ 0.48
VPS18-202ENST00000558474 WASHC4Q2M389 1173 aa18.04■□□□□ 0.48
VPS18-202ENST00000558474 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
VPS18-202ENST00000558474 TDRD7Q8NHU6 1098 aaKnown RBP18.04■□□□□ 0.48
VPS18-202ENST00000558474 DNAJC2Q99543 621 aaKnown RBP18.04■□□□□ 0.48
VPS18-202ENST00000558474 MYH7P12883 1935 aa18.04■□□□□ 0.48
VPS18-202ENST00000558474 KLRK1P26718 216 aa18.03■□□□□ 0.48
VPS18-202ENST00000558474 ZAP70P43403 619 aa18.03■□□□□ 0.48
VPS18-202ENST00000558474 SCARF1Q14162 830 aa18.03■□□□□ 0.48
VPS18-202ENST00000558474 ZSCAN25Q6NSZ9 544 aa18.03■□□□□ 0.48
VPS18-202ENST00000558474 TXNRD3Q86VQ6 643 aa18.03■□□□□ 0.48
VPS18-202ENST00000558474 FHDC1Q9C0D6 1143 aaPredicted RBP18.03■□□□□ 0.48
VPS18-202ENST00000558474 CD209Q9NNX6 404 aa18.03■□□□□ 0.48
VPS18-202ENST00000558474 GOLIM4O00461 696 aa18.02■□□□□ 0.48
VPS18-202ENST00000558474 MAP4K4O95819 1239 aaPredicted RBP18.02■□□□□ 0.48
VPS18-202ENST00000558474 CYP2E1P05181 493 aaPredicted RBP18.02■□□□□ 0.48
VPS18-202ENST00000558474 ZFYP08048 801 aaPredicted RBP18.02■□□□□ 0.48
VPS18-202ENST00000558474 OLFM4Q6UX06 510 aa18.02■□□□□ 0.48
VPS18-202ENST00000558474 TBC1D9Q6ZT07 1266 aa18.02■□□□□ 0.48
VPS18-202ENST00000558474 SLC51AQ86UW1 340 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms