RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 CIAPIN1Q6FI81 312 aa15.54■□□□□ 0.08
LRRC28-206ENST00000558471 CEP85Q6P2H3 762 aa15.54■□□□□ 0.08
LRRC28-206ENST00000558471 C15orf52Q6ZUT6 534 aaKnown RBP15.54■□□□□ 0.08
LRRC28-206ENST00000558471 SSH3Q8TE77 659 aa15.54■□□□□ 0.08
LRRC28-206ENST00000558471 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
LRRC28-206ENST00000558471 KIF3CO14782 793 aa15.53■□□□□ 0.08
LRRC28-206ENST00000558471 VEGFAP15692 232 aaPredicted RBP15.53■□□□□ 0.08
LRRC28-206ENST00000558471 IL15P40933 162 aaPredicted RBP15.53■□□□□ 0.08
LRRC28-206ENST00000558471 PODNQ7Z5L7 613 aa15.53■□□□□ 0.08
LRRC28-206ENST00000558471 L3MBTL3Q96JM7 780 aaPredicted RBP15.53■□□□□ 0.08
LRRC28-206ENST00000558471 COA1Q9GZY4 146 aa15.53■□□□□ 0.08
LRRC28-206ENST00000558471 SCN4AP35499 1836 aa15.52■□□□□ 0.08
LRRC28-206ENST00000558471 PSME4Q14997 1843 aa15.52■□□□□ 0.08
LRRC28-206ENST00000558471 PSMD14O00487 310 aa15.52■□□□□ 0.08
LRRC28-206ENST00000558471 TNIP1Q15025 636 aa15.52■□□□□ 0.08
LRRC28-206ENST00000558471 CD209Q9NNX6 404 aa15.52■□□□□ 0.08
LRRC28-206ENST00000558471 CEP126Q9P2H0 1117 aa15.52■□□□□ 0.08
LRRC28-206ENST00000558471 FGFR2P21802 821 aa15.51■□□□□ 0.07
LRRC28-206ENST00000558471 SUPT16HQ9Y5B9 1047 aaKnown RBP15.51■□□□□ 0.07
LRRC28-206ENST00000558471 SURF6O75683 361 aaKnown RBP15.5■□□□□ 0.07
LRRC28-206ENST00000558471 GYG1P46976 350 aa15.5■□□□□ 0.07
LRRC28-206ENST00000558471 GMPSP49915 693 aaPredicted RBP15.5■□□□□ 0.07
LRRC28-206ENST00000558471 SCNN1DP51172 638 aa15.5■□□□□ 0.07
LRRC28-206ENST00000558471 G3BP1Q13283 466 aaKnown RBP eCLIP15.5■□□□□ 0.07
LRRC28-206ENST00000558471 PUM3Q15397 648 aaKnown RBP15.5■□□□□ 0.07
LRRC28-206ENST00000558471 SIRT2Q8IXJ6 389 aa15.5■□□□□ 0.07
LRRC28-206ENST00000558471 RPAP2Q8IXW5 612 aaPredicted RBP15.5■□□□□ 0.07
LRRC28-206ENST00000558471 FAM84BQ96KN1 310 aaPredicted RBP15.5■□□□□ 0.07
LRRC28-206ENST00000558471 ZBTB12Q9Y330 459 aaPredicted RBP15.5■□□□□ 0.07
LRRC28-206ENST00000558471 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.5■□□□□ 0.07
LRRC28-206ENST00000558471 USP17L3A6NCW0 530 aa15.49■□□□□ 0.07
LRRC28-206ENST00000558471 USP17L4A6NCW7 530 aa15.49■□□□□ 0.07
LRRC28-206ENST00000558471 VIL1P09327 827 aaKnown RBP15.49■□□□□ 0.07
LRRC28-206ENST00000558471 TFCP2Q12800 502 aa15.49■□□□□ 0.07
LRRC28-206ENST00000558471 USP17L1Q7RTZ2 530 aa15.49■□□□□ 0.07
LRRC28-206ENST00000558471 ZNF804AQ7Z570 1209 aa15.49■□□□□ 0.07
LRRC28-206ENST00000558471 LPIN2Q92539 896 aa15.49■□□□□ 0.07
LRRC28-206ENST00000558471 CRBNQ96SW2 442 aa15.49■□□□□ 0.07
LRRC28-206ENST00000558471 HACL1Q9UJ83 578 aa15.49■□□□□ 0.07
LRRC28-206ENST00000558471 ZNF646O15015 1829 aaPredicted RBP15.49■□□□□ 0.07
LRRC28-206ENST00000558471 IQCA1LA6NCM1 817 aa15.48■□□□□ 0.07
LRRC28-206ENST00000558471 SASH1O94885 1247 aa15.48■□□□□ 0.07
LRRC28-206ENST00000558471 IFIT1P09914 478 aaKnown RBP15.48■□□□□ 0.07
LRRC28-206ENST00000558471 SLC5A1P13866 664 aa15.48■□□□□ 0.07
LRRC28-206ENST00000558471 IL1R1P14778 569 aa15.48■□□□□ 0.07
LRRC28-206ENST00000558471 HIBADHP31937 336 aaKnown RBP15.48■□□□□ 0.07
LRRC28-206ENST00000558471 EPS15P42566 896 aa15.48■□□□□ 0.07
LRRC28-206ENST00000558471 ATP2B3Q16720 1220 aa15.48■□□□□ 0.07
LRRC28-206ENST00000558471 FBXO33Q7Z6M2 555 aa15.48■□□□□ 0.07
LRRC28-206ENST00000558471 TAF1DQ9H5J8 278 aaPredicted RBP15.48■□□□□ 0.07
LRRC28-206ENST00000558471 GPRC5DQ9NZD1 345 aa15.48■□□□□ 0.07
LRRC28-206ENST00000558471 NOP58Q9Y2X3 529 aaKnown RBP15.48■□□□□ 0.07
LRRC28-206ENST00000558471 LMOD1P29536 600 aaPredicted RBP15.47■□□□□ 0.07
LRRC28-206ENST00000558471 EPHX2P34913 555 aa15.47■□□□□ 0.07
LRRC28-206ENST00000558471 BCAMP50895 628 aa15.47■□□□□ 0.07
LRRC28-206ENST00000558471 TIMM10P62072 90 aa15.47■□□□□ 0.07
LRRC28-206ENST00000558471 GTF2IP78347 998 aa15.47■□□□□ 0.07
LRRC28-206ENST00000558471 CAVIN4Q5BKX8 364 aa15.47■□□□□ 0.07
LRRC28-206ENST00000558471 DACT2Q5SW24 774 aa15.47■□□□□ 0.07
LRRC28-206ENST00000558471 STRIP1Q5VSL9 837 aa15.47■□□□□ 0.07
LRRC28-206ENST00000558471 TTLL5Q6EMB2 1281 aa15.47■□□□□ 0.07
LRRC28-206ENST00000558471 RSBN1LQ6PCB5 846 aaPredicted RBP15.47■□□□□ 0.07
LRRC28-206ENST00000558471 TDRD7Q8NHU6 1098 aaKnown RBP15.47■□□□□ 0.07
LRRC28-206ENST00000558471 MXD3Q9BW11 206 aa15.47■□□□□ 0.07
LRRC28-206ENST00000558471 SHTN1A0MZ66 631 aa15.46■□□□□ 0.07
LRRC28-206ENST00000558471 TOMM70O94826 608 aa15.46■□□□□ 0.07
LRRC28-206ENST00000558471 OS9Q13438 667 aaPredicted RBP15.46■□□□□ 0.07
LRRC28-206ENST00000558471 C16orf71Q8IYS4 520 aaPredicted RBP15.46■□□□□ 0.07
LRRC28-206ENST00000558471 DPF2Q92785 391 aa15.46■□□□□ 0.07
LRRC28-206ENST00000558471 FBXW7Q969H0 707 aa15.46■□□□□ 0.07
LRRC28-206ENST00000558471 CNOT7Q9UIV1 285 aaKnown RBP15.46■□□□□ 0.07
LRRC28-206ENST00000558471 A0A1B0GUL7 405 aa15.45■□□□□ 0.06
LRRC28-206ENST00000558471 HMMRO75330 724 aa15.45■□□□□ 0.06
LRRC28-206ENST00000558471 RPS12P25398 132 aaKnown RBP15.45■□□□□ 0.06
LRRC28-206ENST00000558471 ADORA1P30542 326 aa15.45■□□□□ 0.06
LRRC28-206ENST00000558471 VPS37DQ86XT2 251 aa15.45■□□□□ 0.06
LRRC28-206ENST00000558471 AGBL3Q8NEM8 1001 aa15.45■□□□□ 0.06
LRRC28-206ENST00000558471 GMLQ99445 158 aa15.45■□□□□ 0.06
LRRC28-206ENST00000558471 IQSEC3Q9UPP2 1182 aaPredicted RBP15.45■□□□□ 0.06
LRRC28-206ENST00000558471 EXOC6BQ9Y2D4 811 aa15.45■□□□□ 0.06
LRRC28-206ENST00000558471 AKAP2Q9Y2D5 859 aa15.45■□□□□ 0.06
LRRC28-206ENST00000558471 ARAP2Q8WZ64 1704 aa15.44■□□□□ 0.06
LRRC28-206ENST00000558471 H7C1D1 291 aa15.44■□□□□ 0.06
LRRC28-206ENST00000558471 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
LRRC28-206ENST00000558471 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
LRRC28-206ENST00000558471 MICALL2Q8IY33 904 aa15.44■□□□□ 0.06
LRRC28-206ENST00000558471 JAG2Q9Y219 1238 aa15.44■□□□□ 0.06
LRRC28-206ENST00000558471 PCDHB15Q9Y5E8 787 aa15.44■□□□□ 0.06
LRRC28-206ENST00000558471 MYH13Q9UKX3 1938 aa15.43■□□□□ 0.06
LRRC28-206ENST00000558471 EAPPQ56P03 285 aaPredicted RBP15.43■□□□□ 0.06
LRRC28-206ENST00000558471 PNMA8AQ86V59 439 aaPredicted RBP15.43■□□□□ 0.06
LRRC28-206ENST00000558471 CERS5Q8N5B7 392 aa15.43■□□□□ 0.06
LRRC28-206ENST00000558471 RBM46Q8TBY0 533 aaKnown RBP15.43■□□□□ 0.06
LRRC28-206ENST00000558471 XAGE2Q96GT9 111 aa15.43■□□□□ 0.06
LRRC28-206ENST00000558471 NEUROD6Q96NK8 337 aa15.43■□□□□ 0.06
LRRC28-206ENST00000558471 ADARB2Q9NS39 739 aaKnown RBP15.43■□□□□ 0.06
LRRC28-206ENST00000558471 ZNF609O15014 1411 aa15.43■□□□□ 0.06
LRRC28-206ENST00000558471 FAM205AQ6ZU69 1335 aa15.43■□□□□ 0.06
LRRC28-206ENST00000558471 USP17L8P0C7I0 530 aa15.42■□□□□ 0.06
LRRC28-206ENST00000558471 USP50Q70EL3 339 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms